Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 4.5e-50 201.1 109 100.0
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 5.7e-37 157.5 108 76.9
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 7.5e-37 157.1 106 77.4
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 3.1e-35 151.8 105 78.1
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 4.5e-34 147.9 105 72.4
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 1.0e-33 146.7 106 70.8
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 2.9e-33 145.2 107 72.9
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 3.8e-33 144.8 108 71.3
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 6.5e-33 144.1 108 70.4
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 8.5e-33 143.7 106 68.9
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 8.5e-33 143.7 106 71.7
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 1.9e-32 142.5 105 73.3
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 2.5e-32 142.1 106 70.8
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 1.2e-31 139.8 103 70.9
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.2e-31 139.8 106 70.8
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.1e-31 139.0 110 69.1
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.7e-31 138.7 105 70.5
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.7e-31 138.7 110 69.1
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 2.7e-31 138.7 110 70.0
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 2.7e-31 138.7 110 70.0
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 3.6e-31 138.3 108 69.4
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 6.1e-31 137.5 85 84.7
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 8.0e-31 137.1 106 69.8
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 1.0e-30 136.7 105 68.6
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 1.0e-30 136.7 105 68.6
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.0e-30 136.7 110 69.1
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 1.4e-30 136.3 104 69.2
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 2.3e-30 135.6 105 70.5
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 3.0e-30 135.2 99 70.7
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 3.0e-30 135.2 108 66.7
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 4.0e-30 134.8 104 72.1
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 5.2e-30 134.4 106 66.0
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 5.2e-30 134.4 108 68.5
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 6.8e-30 134.0 108 68.5
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 6.8e-30 134.0 103 68.0
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 1.2e-29 133.3 104 68.3
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 2.0e-29 132.5 105 66.7
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 3.4e-29 131.7 104 68.3
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 7.5e-29 130.6 106 65.1
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 9.8e-29 130.2 103 63.1
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 9.8e-29 130.2 106 65.1
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 9.8e-29 130.2 105 67.6
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 1.3e-28 129.8 106 67.9
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 2.8e-28 128.6 105 64.8
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 2.8e-28 128.6 103 62.1
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 3.7e-28 128.3 104 68.3
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 3.7e-28 128.3 108 64.8
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 1.4e-27 126.3 81 77.8
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 1.4e-27 126.3 105 62.9
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 1.4e-27 126.3 106 63.2
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 1.4e-27 126.3 109 63.3
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 1.8e-27 125.9 106 62.3
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 4.1e-27 124.8 105 60.0
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 7.0e-27 124.0 104 65.4
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 9.1e-27 123.6 91 71.4
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 2.0e-26 122.5 104 63.5
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 2.0e-26 122.5 105 59.0
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 2.0e-26 122.5 108 64.8
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 3.5e-26 121.7 108 63.0
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 4.5e-26 121.3 106 66.0
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 5.9e-26 120.9 109 61.5
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 7.7e-26 120.6 109 60.6
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 1.3e-25 119.8 107 60.7
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 1.3e-25 119.8 103 65.0
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 1.7e-25 119.4 105 63.8
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 2.3e-25 119.0 90 67.8
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 6.5e-25 117.5 103 62.1
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 6.5e-25 117.5 107 60.7
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 6.5e-25 117.5 104 56.7
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 6.5e-25 117.5 105 62.9
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.1e-24 116.7 107 61.7
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.9e-24 115.9 107 61.7
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 4.2e-24 114.8 96 62.5
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 7.2e-24 114.0 113 57.5
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 2.1e-23 112.5 103 59.2
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 2.8e-23 112.1 113 55.8
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 8.0e-23 110.5 107 58.9
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 1.0e-22 110.2 113 55.8
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 1.4e-22 109.8 102 56.9
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 1.4e-22 109.8 113 53.1
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 2.3e-22 109.0 113 53.1
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 2.3e-22 109.0 106 57.5
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 3.0e-22 108.6 113 54.9
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 3.0e-22 108.6 113 54.0
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 54.0
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 54.0
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 54.0
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 54.0
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 54.0
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 54.0
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 1.5e-21 106.3 113 53.1
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 2.0e-21 105.9 106 56.6
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 3.4e-21 105.1 113 52.2
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 4.4e-21 104.8 88 60.2
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 9.8e-21 103.6 113 52.2
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 2.8e-20 102.1 108 53.7
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 6.3e-20 100.9 89 57.3
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 3.1e-19 98.6 106 50.9
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 3.5e-18 95.1 88 52.3
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 4.5e-18 94.7 91 54.9
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 2.6e-13 79.0 89 47.2
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 9.8e-13 77.0 96 43.8
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 2.2e-12 75.9 87 48.3
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 1.6e-10 69.7 71 53.5
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 1.6e-10 69.7 71 53.5
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 7.8e-10 67.4 53 64.2


User provided reference genes

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