Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 6.8e-113 410.6 199 100.0
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.0e-108 395.2 199 96.0
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 7.4e-83 310.8 189 77.8
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.4e-81 306.6 193 74.6
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.4e-81 305.8 190 75.3
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.4e-81 305.8 199 72.9
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 4.0e-81 305.1 190 74.2
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 9.0e-81 303.9 195 73.3
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 9.0e-81 303.9 195 73.3
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 9.0e-81 303.9 195 73.8
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 9.0e-81 303.9 191 74.3
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.5e-80 303.1 190 75.3
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.0e-80 302.8 190 74.7
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.0e-80 302.8 190 74.7
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 2.6e-80 302.4 192 71.9
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 4.5e-80 301.6 193 73.1
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 4.5e-80 301.6 193 73.6
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 5.8e-80 301.2 188 73.4
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 7.6e-80 300.8 196 73.0
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.2e-79 299.3 185 76.2
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.9e-79 298.1 196 71.4
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.2e-77 293.5 190 72.1
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.6e-77 293.1 189 73.0
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.6e-77 293.1 191 71.2
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 2.1e-77 292.7 189 73.5
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 7.9e-77 290.8 189 70.9
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 7.9e-77 290.8 190 71.6
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.0e-76 290.4 188 73.9
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.8e-76 289.7 190 72.1
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 3.0e-76 288.9 190 71.6
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 3.9e-76 288.5 186 73.7
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.1e-75 287.0 230 62.2
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.5e-75 286.6 189 70.9
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.9e-75 286.2 189 70.4
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.9e-75 286.2 189 71.4
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 2.5e-75 285.8 189 71.4
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 4.3e-75 285.0 189 71.4
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 4.3e-75 285.0 192 68.8
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 7.4e-75 284.3 189 69.3
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.3e-74 283.5 190 71.6
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.3e-74 283.5 186 71.5
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.6e-74 283.1 189 70.9
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.6e-74 283.1 190 71.1
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.6e-74 283.1 189 69.8
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.7e-74 282.0 199 66.8
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.8e-74 281.6 189 70.9
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.1e-73 280.4 186 71.0
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-73 280.4 189 68.8
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.1e-73 280.4 185 71.4
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.1e-73 280.4 188 71.3
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.4e-73 280.0 189 70.4
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.8e-73 279.6 192 69.8
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 6.9e-73 277.7 188 69.1
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 9.0e-73 277.3 185 69.7
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 9.0e-73 277.3 189 70.9
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-72 276.9 190 68.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-72 276.6 190 68.9
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.0e-72 276.2 189 69.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.5e-72 275.0 197 67.0
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.9e-72 274.6 196 67.3
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 2.2e-71 272.7 185 68.1
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.2e-71 272.7 188 68.1
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 2.9e-71 272.3 192 67.2
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 3.8e-71 271.9 204 65.2
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.8e-71 271.9 196 66.8
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.8e-71 271.9 196 66.8
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 3.8e-71 271.9 192 66.1
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 6.5e-71 271.2 185 68.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 8.5e-71 270.8 190 67.4
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.5e-70 269.2 192 65.6
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 3.2e-70 268.9 190 68.4
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 5.5e-70 268.1 190 68.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 9.3e-70 267.3 190 66.8
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-69 266.9 196 66.3
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 3.6e-69 265.4 193 66.3
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.6e-69 265.0 186 67.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 6.1e-69 264.6 186 67.2
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 1.3e-68 263.5 191 65.4
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.8e-68 263.1 194 64.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.3e-68 262.7 190 64.7
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 3.0e-68 262.3 188 68.1
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.9e-67 259.6 190 65.3
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.9e-67 259.6 197 62.9
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 2.5e-67 259.2 194 63.9
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 4.3e-67 258.5 190 64.2
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 4.3e-67 258.5 190 64.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 4.3e-67 258.5 190 64.7
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 5.7e-67 258.1 190 64.7
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 5.7e-67 258.1 190 64.7
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 9.7e-67 257.3 186 66.1
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.3e-66 256.9 194 64.4
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.7e-66 255.4 192 63.0
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.4e-65 253.4 193 64.8
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.1e-65 252.3 184 65.2
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 3.1e-65 252.3 220 57.7
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.1e-65 251.9 189 65.1
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.3e-65 251.5 192 63.5
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.0e-63 247.3 193 59.1
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.3e-63 246.9 150 74.7
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.9e-63 245.7 190 62.6
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.9e-63 245.7 193 62.2
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.5e-63 244.6 188 62.8
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 7.2e-62 241.1 184 63.0
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.2e-61 240.4 192 60.4
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.1e-59 233.8 189 59.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 3.3e-59 232.3 189 60.8
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 8.2e-58 227.6 189 60.3
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.1e-57 225.3 180 62.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 9.1e-57 224.2 186 58.1
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 2.0e-56 223.0 192 56.8
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 7.7e-56 221.1 192 56.8
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 1.0e-55 220.7 191 56.5
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.0e-55 220.7 147 66.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.0e-55 218.4 189 58.2
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 9.4e-54 214.2 190 56.3
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 2.7e-53 212.6 185 56.2
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.7e-52 208.0 189 55.6
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 7.4e-51 204.5 194 53.1
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.8e-50 202.6 137 67.2
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 3.2e-38 162.5 112 66.1
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.0e-31 138.7 92 69.6
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 7.2e-30 134.8 81 77.8
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.6e-29 132.5 110 59.1
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.8e-26 122.9 100 63.0
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.4e-19 99.4 121 46.3
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.4e-17 92.0 95 47.4
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.1e-06 57.8 78 39.7


User provided reference genes

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