Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027943 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 3.2e-89 331.6 157 100.0
Actinidia24234 Actinidia chinensis HOM05D004190 ORTHO05D004692 9.8e-22 107.5 148 45.3
Actinidia07264 Actinidia chinensis HOM05D004190 ORTHO05D004692 1.8e-20 103.2 157 44.6
Lj1P258T42 Lonicera japonica HOM05D004190 ORTHO05D004692 7.0e-12 74.7 144 36.1
Rhsim13G0195100 Rhododendron simsii HOM05D004190 ORTHO05D004692 1.6e-11 73.6 173 37.6
CsaV3_1G034280 Cucumis sativus L. HOM05D004190 ORTHO05D004692 2.8e-08 62.8 144 31.9
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 8.0e-08 61.2 124 37.1
MELO3C020629.2 Cucumis melo HOM05D004190 ORTHO05D004692 1.0e-07 60.8 146 32.2
Oeu002349.1 Olea europaea HOM05D004190 ORTHO05D004692 1.4e-07 60.5 128 35.2
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.8e-07 60.1 120 35.8
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 1.8e-07 60.1 120 35.8
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 3.0e-07 59.3 144 32.6
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 3.0e-07 59.3 124 36.3
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 6.8e-07 58.2 120 35.0
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 6.8e-07 58.2 120 33.3
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 6.8e-07 58.2 124 35.5
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 6.8e-07 58.2 110 35.5
Nitab4.5_0003516g0050 Nicotiana tabacum HOM05D004190 ORTHO05D004692 1.2e-06 57.4 132 31.1
Prupe.6G076700 Prunus persica HOM05D004190 ORTHO05D004692 1.5e-06 57.0 145 33.1
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 2.0e-06 56.6 140 30.7
Nitab4.5_0001135g0020 Nicotiana tabacum HOM05D004190 ORTHO05D004692 2.0e-06 56.6 133 28.6
QL01p031797 Quercus lobata HOM05D004190 ORTHO05D004692 2.0e-06 56.6 169 31.4
Haze_12048 Corylus avellana HOM05D004190 ORTHO05D004692 2.6e-06 56.2 143 32.2
Hund18906 Selenicereus undatus HOM05D004190 ORTHO05D004692 4.4e-06 55.5 121 35.5
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 5.8e-06 55.1 159 30.8
Sed0018693 Sechium edule HOM05D004190 ORTHO05D004692 5.8e-06 55.1 130 33.8
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 7.5e-06 54.7 112 32.1
Migut.N02470 Erythranthe guttata HOM05D004190 ORTHO05D004692 9.8e-06 54.3 141 33.3


User provided reference genes

Program Settings