Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 0.0e+00 1151.7 622 100.0
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 6.5e-210 734.6 456 91.9
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.4e-209 733.4 614 70.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.4e-185 653.7 580 67.8
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.8e-183 646.7 618 65.0
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.2e-163 580.9 472 70.1
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.8e-143 513.8 479 65.8
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 7.5e-142 508.4 478 64.6
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 8.3e-141 505.0 464 65.9
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.2e-139 501.1 470 65.5
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.8e-135 487.3 456 64.3
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.2e-134 484.6 500 62.8
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 2.6e-134 483.4 626 48.6
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 9.9e-134 481.5 452 64.6
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.4e-132 477.6 485 62.3
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 3.2e-132 476.5 466 62.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 4.6e-131 472.6 482 60.8
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 6.0e-131 472.2 447 65.5
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 2.3e-130 470.3 563 54.7
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 3.0e-130 469.9 472 62.5
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 3.0e-130 469.9 462 63.2
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 3.9e-130 469.5 555 55.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 8.6e-130 468.4 552 54.9
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 8.6e-130 468.4 467 61.5
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.5e-129 467.6 524 58.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.9e-129 467.2 536 57.6
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 9.5e-129 464.9 465 61.3
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.6e-128 464.2 470 62.1
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 2.1e-128 463.8 479 61.2
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 8.1e-128 461.8 507 56.2
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.4e-127 461.1 452 62.6
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 4.0e-127 459.5 453 61.6
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 4.0e-127 459.5 518 57.9
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 2.6e-126 456.8 464 60.3
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 3.4e-126 456.4 470 63.2
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 7.6e-126 455.3 470 63.0
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 9.9e-126 454.9 459 63.0
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.7e-125 454.1 454 62.6
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 8.4e-125 451.8 448 61.4
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.1e-124 451.4 563 54.2
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 4.1e-124 449.5 482 60.0
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.6e-123 447.6 486 59.7
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 4.6e-123 446.0 447 61.7
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.0e-123 445.7 448 61.6
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 7.8e-123 445.3 465 59.8
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.0e-122 444.9 488 52.5
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 2.3e-122 443.7 468 61.1
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 3.0e-122 443.4 480 57.7
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 3.9e-122 443.0 513 58.9
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 5.1e-122 442.6 453 61.1
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 6.6e-122 442.2 464 60.6
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 6.6e-122 442.2 468 59.8
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.5e-121 441.0 482 58.5
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 3.3e-121 439.9 458 61.1
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 9.6e-121 438.3 457 60.4
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 4.7e-120 436.0 457 60.2
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.6e-118 430.3 471 58.4
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 8.4e-117 425.2 461 59.9
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.4e-116 424.5 510 54.5
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.4e-116 424.5 460 61.3
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.4e-116 424.5 456 59.2
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 2.1e-115 420.6 480 58.3
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.1e-115 420.6 460 60.4
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 3.5e-115 419.9 524 54.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.3e-114 417.9 471 59.2
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 1.7e-114 417.5 483 57.6
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.3e-112 411.4 507 53.3
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.8e-112 409.5 464 58.2
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 2.6e-110 403.7 458 57.2
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 4.2e-108 396.4 456 56.4
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 7.1e-108 395.6 462 57.1
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 1.6e-107 394.4 474 55.9
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 3.0e-106 390.2 477 55.3
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 3.9e-106 389.8 465 56.6
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 8.7e-106 388.7 520 52.7
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 1.3e-104 384.8 451 57.0
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 3.7e-104 383.3 462 56.1
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 4.8e-104 382.9 457 56.0
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 1.4e-103 381.3 458 56.6
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 1.8e-103 380.9 462 55.6
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 5.8e-102 375.9 391 60.4
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.7e-101 374.4 455 56.7
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 8.4e-101 372.1 452 56.4
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 8.4e-101 372.1 475 47.8
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.9e-100 370.9 475 51.8
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 3.5e-99 366.7 451 55.7
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 7.9e-99 365.5 427 57.6
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 1.8e-98 364.4 462 56.1
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 2.6e-94 350.5 465 52.5
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 1.1e-92 345.1 451 54.5
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 3.5e-91 340.1 746 39.5
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.0e-85 322.0 477 50.1
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.4e-82 311.6 539 47.5
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.4e-82 311.6 539 47.5
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 1.9e-81 307.8 720 38.2
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 2.5e-81 307.4 569 43.6
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.5e-70 270.0 269 54.6
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.7e-69 268.1 271 56.5
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 4.7e-59 233.4 253 51.4
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.2e-52 210.7 238 55.0
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 2.3e-50 204.5 351 41.3
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 6.3e-48 196.4 216 53.7
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 8.3e-48 196.1 276 42.0
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.3e-45 188.0 445 41.6
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 8.6e-45 186.0 228 50.0
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 7.2e-44 183.0 185 57.3
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 3.0e-42 177.6 144 70.1
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 5.2e-34 150.2 98 78.6
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 8.9e-34 149.4 110 73.6
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 1.5e-33 148.7 158 52.5
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.9e-32 143.7 82 91.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 1.9e-28 131.7 400 36.2
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 9.5e-28 129.4 142 49.3
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 2.1e-27 128.3 161 46.6
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 3.5e-22 110.9 171 45.0
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 1.7e-21 108.6 158 43.0
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 4.7e-19 100.5 168 48.8
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.9e-15 88.6 164 41.5
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 2.3e-13 81.6 340 31.2
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.5e-12 79.0 272 40.8
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 5.6e-12 77.0 50 78.0


User provided reference genes

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