Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026871 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.8e-66 255.8 125 100.0
CSS0025197 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 8.2e-64 246.9 125 96.0
CSS0020036 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 7.7e-62 240.4 125 93.6
CSS0041698 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.0e-61 240.0 125 94.4
Manes.15G193301 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.18G143401 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S001635 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S003597 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S004905 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S005886 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S007848 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S011772 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S015696 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S017986 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S020275 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S024052 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S024852 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S025016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S026216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S026252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S026952 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S027016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S027516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S029252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S030016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S030252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S031516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S031716 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S032416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S033816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S034816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S035416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S036516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S036816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S037516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S039116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S041116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S041816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S043216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S043916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S045216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S046916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S048416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S049316 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S051116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S051616 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S052516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S053016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S053216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
Manes.S054816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.0
CSS0050263 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.6e-59 232.6 125 92.8
Manes.S028116 Manihot esculenta HOM05D001018 ORTHO05D000626 2.1e-59 232.3 125 91.2
ScUNg0001640 Simmondsia chinensis HOM05D001018 ORTHO05D000626 2.1e-59 232.3 125 91.2
CSS0000564 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 6.1e-59 230.7 125 90.4
Gorai.001G276600 Gossypium raimondii HOM05D001018 ORTHO05D000626 6.1e-59 230.7 125 90.4
Gorai.001G276700 Gossypium raimondii HOM05D001018 ORTHO05D000626 6.1e-59 230.7 125 90.4
Gorai.001G276800 Gossypium raimondii HOM05D001018 ORTHO05D000626 6.1e-59 230.7 125 90.4
Atru.chr6.2695 Acer truncatum HOM05D001018 ORTHO05D000626 1.0e-58 229.9 125 90.4
Manes.S033916 Manihot esculenta HOM05D001018 ORTHO05D000626 1.0e-58 229.9 125 90.4
Migut.A01240 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.8e-58 229.2 125 90.4
QL11p027314 Quercus lobata HOM05D001018 ORTHO05D000626 3.0e-58 228.4 124 90.3
Sopen00g002220 Solanum pennellii HOM05D001018 ORTHO05D000626 5.2e-58 227.6 125 89.6
PGSC0003DMG402019042 Solanum tuberosum HOM05D001018 ORTHO05D000626 5.2e-58 227.6 125 89.6
CiPaw.05G154900 Carya illinoinensis HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
CiPaw.05G155900 Carya illinoinensis HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
CiPaw.15G103300 Carya illinoinensis HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
Potri.008G224210 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
Potri.014G185588 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
Potri.014G185804 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
Potri.014G186452 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.7e-58 227.3 125 89.6
Migut.A01079 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.8e-58 226.9 125 89.6
Migut.A01234 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.8e-58 226.9 125 89.6
Migut.A01241 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.8e-58 226.9 125 89.6
Migut.G00890 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.8e-58 226.9 125 89.6
Migut.C00303 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.8e-56 221.9 120 90.8
CiPaw.15G104700 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.8e-56 221.1 125 88.0
Manes.S029752 Manihot esculenta HOM05D001018 ORTHO05D000626 6.3e-56 220.7 122 89.3
Manes.S032916 Manihot esculenta HOM05D001018 ORTHO05D000626 6.3e-56 220.7 122 89.3
unitig_670.g34683 Utricularia gibba HOM05D001018 ORTHO05D000626 4.5e-54 214.5 125 85.6
Migut.A01193 Erythranthe guttata HOM05D001018 ORTHO05D000626 5.0e-53 211.1 125 84.0
Migut.A01196 Erythranthe guttata HOM05D001018 ORTHO05D000626 5.0e-53 211.1 125 84.0
Migut.A01194 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-51 205.3 125 82.4
Atru.chr10.41 Acer truncatum HOM05D001018 ORTHO05D000626 3.6e-51 204.9 125 82.4
Migut.A01220 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.0e-51 203.8 108 90.7
Sopen07g009480 Solanum pennellii HOM05D001018 ORTHO05D000626 2.6e-49 198.7 125 81.6
CiPaw.05G156000 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.1e-47 190.3 105 88.6
unitig_581.g33720 Utricularia gibba HOM05D001018 ORTHO05D000626 9.1e-47 190.3 123 80.5
CiPaw.15G105700 Carya illinoinensis HOM05D001018 ORTHO05D000626 1.6e-46 189.5 105 88.6
Migut.A01245 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.5e-44 183.0 101 88.1
ScUNg0001590 Simmondsia chinensis HOM05D001018 ORTHO05D000626 9.4e-44 180.3 127 75.6
Sed0017842 Sechium edule HOM05D001018 ORTHO05D000626 2.1e-43 179.1 98 87.8
HPP92_020620 Vanilla planifolia HOM05D000099 ORTHO05D000205 5.5e-36 154.5 98 80.6
Migut.A01232 Erythranthe guttata HOM05D001018 ORTHO05D000626 9.5e-36 153.7 88 87.5
unitig_685.g33146 Utricularia gibba HOM05D001018 ORTHO05D000626 2.1e-35 152.5 122 70.5
Migut.A01215 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.4e-34 149.8 77 90.9
unitig_721.g34549 Utricularia gibba HOM05D001018 ORTHO05D000626 1.8e-34 149.4 129 67.4
Glyma.U009202 Glycine max HOM05D001018 ORTHO05D000626 9.8e-33 143.7 98 74.5
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 2.7e-30 135.6 90 76.7
unitig_102.g31708 Utricularia gibba HOM05D001018 ORTHO05D000626 2.1e-27 125.9 90 73.3
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 1.0e-26 123.6 84 70.2
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 2.3e-26 122.5 74 81.1
LjContig00006g0002932 Lotus japonicus HOM05D001018 ORTHO05D002636 1.2e-25 120.2 124 58.1
LjContig00488g0014329 Lotus japonicus HOM05D001018 ORTHO05D002636 1.2e-25 120.2 124 58.1
unitig_885.g34269 Utricularia gibba HOM05D001018 ORTHO05D000626 5.8e-25 117.9 94 68.1
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 6.4e-24 114.4 85 68.2
Sopen00g013130 Solanum pennellii HOM05D001018 ORTHO05D000626 1.1e-23 113.6 65 87.7
Cpa.g.sc2112.2 Carica papaya HOM05D001018 ORTHO05D000626 1.0e-21 107.1 73 76.7
Zm00001eb264030 Zea mays HOM05D001018 ORTHO05D000626 3.0e-21 105.5 72 79.2
unitig_172.g35454 Utricularia gibba HOM05D001018 ORTHO05D000626 3.0e-13 79.0 122 46.7
Phvul.002G055350 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 1.1e-12 77.0 52 75.0
Phvul.011G157400 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 3.3e-12 75.5 32 96.9
CiPaw.05G153900 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.5e-12 73.9 59 71.2
Sopen00g001850 Solanum pennellii HOM05D001018 ORTHO05D000626 2.8e-11 72.4 41 75.6
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 8.1e-11 70.9 105 44.8
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 8.1e-11 70.9 105 44.8
Phvul.003G090100 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 2.6e-09 65.9 104 46.2
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 4.4e-09 65.1 43 79.1
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 5.8e-09 64.7 39 84.6
Zm00001eb440240 Zea mays HOM05D001018 ORTHO05D000626 5.8e-09 64.7 83 54.2
Zm00001eb441190 Zea mays HOM05D001018 ORTHO05D000626 5.8e-09 64.7 39 84.6
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-08 63.2 39 82.1
unitig_579.g34807 Utricularia gibba HOM05D001018 ORTHO05D000626 2.2e-08 62.8 65 58.5
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 4.9e-08 61.6 36 88.9
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 4.9e-08 61.6 36 88.9
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 4.9e-08 61.6 36 88.9
Oeu051370.1 Olea europaea HOM05D005014 ORTHO05D003704 8.3e-08 60.8 65 50.8
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-07 60.1 39 79.5
unitig_579.g34818 Utricularia gibba HOM05D001018 ORTHO05D000626 1.4e-07 60.1 37 86.5
EL10As19g24175 Beta vulgaris HOM05D001018 ORTHO05D000626 5.4e-07 58.2 128 39.8
EL10As19g24176 Beta vulgaris HOM05D001018 ORTHO05D000626 5.4e-07 58.2 128 39.8
EL10As19g24177 Beta vulgaris HOM05D001018 ORTHO05D000626 5.4e-07 58.2 128 39.8
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 5.4e-07 58.2 39 76.9
A05p21940 Brassica napus HOM05D001018 ORTHO05D000626 9.2e-07 57.4 36 83.3
unitig_678.g33163 Utricularia gibba HOM05D001018 ORTHO05D000626 1.6e-06 56.6 57 61.4
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 6.0e-06 54.7 33 84.8


User provided reference genes

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