Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026788 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 7.2e-56 220.3 109 100.0
Dinv11193 Davidia involucrata HOM05D005415 ORTHO05D006242 3.2e-40 168.3 100 82.0
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 4.7e-39 164.5 100 81.0
vmacro19135 Vaccinium macrocarpon HOM05D005415 ORTHO05D006242 1.8e-38 162.5 100 81.0
TAR629G2415 Trochodendron aralioides HOM05D005415 ORTHO05D006242 8.5e-33 143.7 100 71.0
Nn4g22247 Nelumbo nucifera HOM05D005415 ORTHO05D006242 1.1e-32 143.3 100 68.0
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 5.5e-32 141.0 102 67.6
TAR629G1046 Trochodendron aralioides HOM05D005415 ORTHO05D006242 5.5e-32 141.0 100 70.0
GSVIVG01008582001 Vitis vinifera HOM05D005415 ORTHO05D006242 8.8e-30 133.7 100 67.0
CiPaw.13G052100 Carya illinoinensis HOM05D005415 ORTHO05D006242 3.4e-29 131.7 100 67.0
Rhsim08G0192500 Rhododendron simsii HOM05D005415 ORTHO05D006242 3.4e-29 131.7 101 69.3
Cpa.g.sc4.162 Carica papaya HOM05D005415 ORTHO05D006242 7.5e-29 130.6 100 70.0
Ciclev10031056m.g Citrus clementina HOM05D005415 ORTHO05D006242 7.5e-29 130.6 108 61.1
Oeu030666.2 Olea europaea HOM05D005415 ORTHO05D006242 9.8e-29 130.2 100 64.0
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 9.8e-29 130.2 100 63.0
QL10p002178 Quercus lobata HOM05D005415 ORTHO05D006242 1.3e-28 129.8 96 67.7
MBI07_g01996_MAGBIO Magnolia biondii HOM05D005415 ORTHO05D006242 6.3e-28 127.5 101 61.4
Manes.06G122000 Manihot esculenta HOM05D005415 ORTHO05D006242 6.3e-28 127.5 100 63.0
Sabra15G0120800 Salix brachista HOM05D005415 ORTHO05D006242 6.3e-28 127.5 100 63.0
Lj4g0026231 Lotus japonicus HOM05D005415 ORTHO05D006242 1.1e-27 126.7 100 61.0
Thecc.03G133700 Theobroma cacao HOM05D005415 ORTHO05D006242 1.1e-27 126.7 100 65.0
Lalb_Chr13g0297171 Lupinus albus HOM05D005415 ORTHO05D006242 1.4e-27 126.3 100 63.0
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 2.4e-27 125.6 104 63.5
Migut.I00557 Erythranthe guttata HOM05D005415 ORTHO05D006242 3.1e-27 125.2 102 62.7
Nitab4.5_0001213g0090 Nicotiana tabacum HOM05D005415 ORTHO05D006242 3.1e-27 125.2 100 66.0
Sed0003726 Sechium edule HOM05D005415 ORTHO05D006242 2.0e-26 122.5 102 59.8
Nitab4.5_0003683g0010 Nicotiana tabacum HOM05D005415 ORTHO05D006242 3.5e-26 121.7 100 62.0
Sc10g0010570 Simmondsia chinensis HOM05D005415 ORTHO05D006242 3.5e-26 121.7 100 60.0
HanXRQChr09g0273461 Helianthus annuus HOM05D005415 ORTHO05D006242 4.5e-26 121.3 100 63.0
MSTRG.22895 Avicennia marina HOM05D005415 ORTHO05D006242 1.0e-25 120.2 88 64.8
Gohir.A07G049360 Gossypium hirsutum HOM05D005415 ORTHO05D006242 1.0e-25 120.2 100 63.0
Sopen05g009520 Solanum pennellii HOM05D005415 ORTHO05D006242 1.7e-25 119.4 100 60.0
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea HOM05D005415 ORTHO05D006242 2.3e-25 119.0 100 59.0
Lsat_1_v5_gn_4_82521 Lactuca sativa HOM05D005415 ORTHO05D006242 2.3e-25 119.0 100 61.0
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea HOM05D005415 ORTHO05D006242 2.9e-25 118.6 100 59.0
Solyc05g014400.4 Solanum lycopersicum HOM05D005415 ORTHO05D006242 2.9e-25 118.6 100 60.0
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 2.9e-25 118.6 100 60.0
Aqoxy3G01618 Aquilegia oxysepala HOM05D005415 ORTHO05D006242 3.8e-25 118.2 103 57.3
Phvul.002G284900 Phaseolus vulgaris HOM05D005415 ORTHO05D006242 3.8e-25 118.2 100 59.0
Solyc12g005900.3 Solanum lycopersicum HOM05D005415 ORTHO05D006242 3.8e-25 118.2 100 60.0
Sopen12g001850 Solanum pennellii HOM05D005415 ORTHO05D006242 3.8e-25 118.2 100 60.0
Gohir.D07G053600 Gossypium hirsutum HOM05D005415 ORTHO05D006242 5.0e-25 117.9 100 62.0
Gorai.001G056700 Gossypium raimondii HOM05D005415 ORTHO05D006242 5.0e-25 117.9 100 62.0
Duzib068G0666 Durio zibethinus HOM05D005415 ORTHO05D006242 6.5e-25 117.5 100 60.0
Eucgr.B00088 Eucalyptus grandis HOM05D005415 ORTHO05D006242 1.9e-24 115.9 100 61.0
HPP92_021709 Vanilla planifolia HOM05D005415 ORTHO05D006242 2.5e-24 115.5 100 56.0
Peaxi162Scf00047g00185 Petunia axillaris HOM05D005415 ORTHO05D006242 4.2e-24 114.8 100 59.0
RcHm_v2.0_Chr7g0189541 Rosa chinensis HOM05D005415 ORTHO05D006242 5.5e-24 114.4 111 58.6
HPP92_021694 Vanilla planifolia HOM05D005415 ORTHO05D006242 5.5e-24 114.4 100 56.0
VMungo0251G3541 Vigna mungo HOM05D005415 ORTHO05D006242 5.5e-24 114.4 102 59.8
Lj9C481T20 Lonicera japonica HOM05D005415 ORTHO05D006242 7.2e-24 114.0 102 63.7
PGR083G0902 Punica granatum HOM05D005415 ORTHO05D006242 7.2e-24 114.0 100 60.0
Psat7g037120 Pisum sativum HOM05D005415 ORTHO05D006242 1.2e-23 113.2 100 59.0
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 3.6e-23 111.7 99 58.6
Ca_17566_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 6.1e-23 110.9 100 58.0
Ca_29727_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 6.1e-23 110.9 100 58.0
Glyma.08G010700 Glycine max HOM05D005415 ORTHO05D006242 6.1e-23 110.9 100 58.0
TPR.G12965 Trifolium pratense HOM05D005415 ORTHO05D006242 6.1e-23 110.9 100 56.0
Medtr8g096570 Medicago truncatula HOM05D005415 ORTHO05D006242 1.0e-22 110.2 100 57.0
ATR0582G259 Amborella trichopoda HOM05D005415 ORTHO05D006242 1.8e-22 109.4 100 56.0
CsaV3_1G000400 Cucumis sativus L. HOM05D005415 ORTHO05D006242 1.8e-22 109.4 101 55.4
DCAR_021639 Daucus carota HOM05D005415 ORTHO05D006242 1.8e-22 109.4 94 58.5
CAN.G2034.2 Capsicum annuum HOM05D005415 ORTHO05D006242 4.0e-22 108.2 100 58.0
PSO017G0412 Papaver somniferum HOM05D005415 ORTHO05D006242 5.2e-22 107.8 105 51.4
unitig_8.g4692 Utricularia gibba HOM05D005415 ORTHO05D006242 5.2e-22 107.8 81 63.0
PSO478G2612 Papaver somniferum HOM05D005415 ORTHO05D006242 1.2e-21 106.7 105 51.4
MELO3C026191.2 Cucumis melo HOM05D005415 ORTHO05D006242 2.0e-21 105.9 93 54.8
ClCG06G018070 Citrullus lanatus HOM05D005415 ORTHO05D006242 3.4e-21 105.1 101 55.4
COL.COLO4_16633 Corchorus olitorius HOM05D005415 ORTHO05D006242 5.7e-21 104.4 102 55.9
SalBow5G0795 Salvia bowleyana HOM05D005415 ORTHO05D006242 7.5e-21 104.0 100 61.0
FAN28G1156 Fragaria x ananassa HOM05D005415 ORTHO05D006242 2.8e-20 102.1 88 56.8
CANSAT25G2590 Cannabis sativa HOM05D005415 ORTHO05D006242 4.9e-20 101.3 100 54.0
Cfa018765 Carpinus fangiana HOM05D005415 ORTHO05D006242 4.9e-20 101.3 77 67.5
FAN19G3201 Fragaria x ananassa HOM05D005415 ORTHO05D006242 4.9e-20 101.3 111 50.5
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 4.9e-20 101.3 89 58.4
FvH4_1g26610 Fragaria vesca HOM05D005415 ORTHO05D006242 6.3e-20 100.9 111 50.5
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 6.3e-20 100.9 89 58.4
FAN26G2295 Fragaria x ananassa HOM05D005415 ORTHO05D006242 1.4e-19 99.8 88 55.7
SGA_v2.0_scaffold414G51200 Striga asiatica HOM05D005415 ORTHO05D006242 1.8e-19 99.4 100 50.0
THA.LOC104798938 Tarenaya hassleriana HOM05D005415 ORTHO05D006242 7.0e-19 97.4 80 56.2
Hund02456 Selenicereus undatus HOM05D005415 ORTHO05D006242 9.2e-19 97.1 100 54.0
Aa31LG1G18400 Aethionema arabicum HOM05D005415 ORTHO05D006242 5.0e-17 91.3 82 57.3
A09p08330 Brassica napus HOM05D005415 ORTHO05D006242 6.6e-17 90.9 87 56.3
BraA09t36482Z Brassica rapa HOM05D005415 ORTHO05D006242 6.6e-17 90.9 87 56.3
BcaC04g23337 Brassica carinata HOM05D005415 ORTHO05D006242 1.5e-16 89.7 87 55.2
C09p09400 Brassica napus HOM05D005415 ORTHO05D006242 1.5e-16 89.7 87 55.2
BolC9t53852H Brassica oleracea HOM05D005415 ORTHO05D006242 1.9e-16 89.4 87 55.2
Thhalv10003815m.g Eutrema salsugineum HOM05D005415 ORTHO05D006242 2.5e-16 89.0 91 53.8
AL8G40620 Arabidopsis lyrata HOM05D005415 ORTHO05D006242 3.3e-16 88.6 91 51.6
BcaB04g19924 Brassica carinata HOM05D005415 ORTHO05D006242 3.3e-16 88.6 91 53.8
AT5G63540 Arabidopsis thaliana HOM05D005415 ORTHO05D006242 4.3e-16 88.2 91 52.7
CARHR277400 Cardamine hirsuta HOM05D005415 ORTHO05D006242 5.6e-16 87.8 84 54.8
Carub.0008s2427 Capsella rubella HOM05D005415 ORTHO05D006242 6.1e-15 84.3 91 48.4
Sp2g26630 Schrenkiella parvula HOM05D005415 ORTHO05D006242 1.4e-14 83.2 91 50.5
SHI10702 Sapria himalayana HOM05D005415 ORTHO05D006242 1.8e-14 82.8 135 39.3
EL10Ac5g11383 Beta vulgaris HOM05D005415 ORTHO05D006242 4.0e-14 81.6 100 46.0
Zm00001eb085270 Zea mays HOM05D005415 ORTHO05D006242 8.9e-14 80.5 101 45.5
FAN23G0140 Fragaria x ananassa HOM05D005415 ORTHO05D006242 2.6e-13 79.0 66 57.6
SHI31560 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-13 78.6 66 54.5
AUR62038846 Chenopodium quinoa HOM05D005415 ORTHO05D006242 3.7e-12 75.1 100 44.0
AUR62043951 Chenopodium quinoa HOM05D005415 ORTHO05D006242 3.7e-12 75.1 100 44.0
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 4.1e-11 71.6 87 46.0
AUR62029576 Chenopodium quinoa HOM05D005415 ORTHO05D006242 9.2e-11 70.5 100 43.0
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 1.3e-09 66.6 89 41.6
Pp3c4_19920 Physcomitrium patens HOM05D005415 ORTHO05D006242 3.0e-09 65.5 102 38.2
SEGI_11582 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 5.2e-06 54.7 44 61.4


User provided reference genes

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