Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 9.7e-267 922.9 469 100.0
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.6e-243 845.1 460 89.8
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.7e-240 833.6 433 92.4
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 2.9e-239 831.6 461 88.9
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 3.8e-239 831.2 434 92.2
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.9e-238 828.9 461 89.4
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 7.2e-238 827.0 461 88.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.5e-235 819.3 459 86.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.3e-235 818.1 469 85.1
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.7e-234 814.7 461 86.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 4.8e-234 814.3 426 91.1
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.1e-233 813.1 467 85.9
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 3.1e-233 811.6 457 85.3
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 3.1e-233 811.6 434 89.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 3.1e-233 811.6 428 90.4
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 4.1e-233 811.2 456 85.3
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 4.1e-233 811.2 427 90.2
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 4.1e-233 811.2 460 88.3
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.3e-233 810.8 466 83.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 9.1e-233 810.1 459 86.1
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.6e-232 809.3 462 84.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.0e-231 806.6 459 85.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 5.0e-231 804.3 434 87.8
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 5.0e-231 804.3 466 84.1
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.9e-230 802.4 488 80.7
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.2e-230 801.2 459 86.5
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 4.2e-230 801.2 459 84.7
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 5.5e-230 800.8 461 84.6
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 5.5e-230 800.8 461 84.2
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.2e-230 800.4 460 86.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 9.4e-230 800.0 460 85.4
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.6e-229 799.3 431 89.3
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.1e-229 798.9 427 89.5
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 2.1e-229 798.9 428 89.7
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.6e-229 798.1 462 84.4
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 6.1e-229 797.3 454 85.0
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 8.0e-229 797.0 467 82.7
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.0e-228 796.6 455 85.1
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.0e-228 796.6 461 83.7
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 3.0e-228 795.0 461 83.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 3.0e-228 795.0 433 88.0
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 5.2e-228 794.3 431 87.2
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 6.8e-228 793.9 427 88.8
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.5e-227 792.7 464 85.8
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 9.8e-227 790.0 430 87.4
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 9.8e-227 790.0 424 88.2
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 9.8e-227 790.0 461 82.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.3e-226 789.6 459 83.7
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.7e-226 789.3 426 89.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 2.8e-226 788.5 432 85.6
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 3.7e-226 788.1 478 81.8
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 4.8e-226 787.7 459 83.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 6.3e-226 787.3 434 85.7
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.4e-225 786.2 427 88.8
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.4e-225 786.2 466 82.4
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.0e-224 782.3 415 88.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 7.7e-224 780.4 466 80.9
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 7.7e-224 780.4 434 86.4
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.0e-223 780.0 467 81.6
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.3e-223 778.9 468 81.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 2.3e-223 778.9 466 80.7
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 2.9e-223 778.5 466 80.9
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.1e-222 776.5 466 80.9
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.5e-222 775.4 434 84.8
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.6e-221 771.5 434 86.6
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 3.6e-221 771.5 481 78.2
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.0e-220 770.0 468 80.8
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.3e-220 768.8 427 84.8
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.0e-220 768.1 468 79.9
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 8.9e-220 766.9 468 79.5
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 7.5e-219 763.8 419 85.0
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.1e-217 760.0 496 77.8
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.2e-216 756.5 449 82.6
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.3e-215 753.1 466 78.8
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 8.6e-215 750.4 424 84.0
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 3.6e-213 745.0 401 89.0
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 8.0e-213 743.8 430 83.0
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 8.0e-213 743.8 449 82.6
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.2e-211 740.0 424 82.3
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 2.0e-211 739.2 426 84.3
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 8.3e-210 733.8 432 80.3
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.9e-209 732.6 422 80.6
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 3.9e-207 724.9 401 86.0
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.0e-207 724.5 475 77.1
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 7.5e-203 710.7 427 77.8
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-201 706.4 429 80.0
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 2.4e-201 705.7 382 88.7
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 5.4e-201 704.5 420 77.4
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 7.0e-201 704.1 489 73.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 5.1e-199 698.0 424 76.7
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 5.6e-198 694.5 400 86.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.7e-194 681.8 523 67.5
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.5e-190 669.8 372 86.3
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.8e-188 662.9 457 72.4
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 4.4e-187 658.3 387 82.2
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.7e-184 649.0 421 71.5
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 6.0e-184 647.9 357 87.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.7e-178 629.8 435 73.1
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.6e-171 605.9 377 80.4
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.5e-166 590.1 424 65.3
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.1e-165 586.3 426 66.0
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.4e-164 582.8 492 64.2
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 8.8e-143 511.1 459 59.3
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 9.7e-142 507.7 270 89.3
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 6.3e-141 505.0 307 82.4
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 6.9e-140 501.5 272 87.5
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.9e-138 496.1 374 63.6
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.0e-115 420.2 230 88.3
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 5.4e-68 262.7 147 83.0
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 4.3e-65 253.1 190 68.9
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.4e-62 243.4 147 78.9
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.4e-46 190.3 97 89.7
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 4.6e-27 126.7 70 87.1
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 6.1e-27 126.3 79 72.2
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 5.0e-21 106.7 57 86.0
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 9.7e-17 92.4 49 89.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.6e-11 73.9 42 81.0
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.1e-11 73.2 43 79.1
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.3e-10 71.2 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 2.2e-08 64.7 40 77.5


User provided reference genes

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