Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026720 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 1.2e-74 283.1 142 100.0
CSS0042301 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 2.6e-74 282.0 142 99.3
CSS0015702 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 4.9e-65 251.1 136 91.2
Actinidia24146 Actinidia chinensis HOM05D004091 ORTHO05D004581 1.3e-49 199.9 136 74.3
Dinv16219 Davidia involucrata HOM05D004091 ORTHO05D004581 1.0e-46 190.3 138 67.4
Rhsim13G0100400 Rhododendron simsii HOM05D004091 ORTHO05D004581 1.1e-43 180.3 138 65.9
GSVIVG01031466001 Vitis vinifera HOM05D004091 ORTHO05D004581 3.1e-43 178.7 136 64.7
vmacro03254 Vaccinium macrocarpon HOM05D004091 ORTHO05D004581 3.8e-41 171.8 136 64.7
Potri.009G005600 Populus trichocarpa HOM05D004091 ORTHO05D004581 1.4e-40 169.9 134 64.9
Duzib170G1119 Durio zibethinus HOM05D004091 ORTHO05D004581 1.9e-40 169.5 135 60.7
Gohir.D05G088200 Gossypium hirsutum HOM05D004091 ORTHO05D004581 1.9e-40 169.5 135 60.7
Gorai.009G090400 Gossypium raimondii HOM05D004091 ORTHO05D004581 2.5e-40 169.1 136 61.8
TAR369G1011 Trochodendron aralioides HOM05D004091 ORTHO05D004581 5.5e-40 167.9 135 61.5
Thecc.09G298700 Theobroma cacao HOM05D004091 ORTHO05D004581 9.4e-40 167.2 135 61.5
TAR623G0825 Trochodendron aralioides HOM05D004091 ORTHO05D004581 2.7e-39 165.6 137 62.0
CiPaw.11G059100 Carya illinoinensis HOM05D004091 ORTHO05D004581 6.1e-39 164.5 136 61.0
Gohir.A05G087000 Gossypium hirsutum HOM05D004091 ORTHO05D004581 6.1e-39 164.5 136 59.6
TPR.G36836 Trifolium pratense HOM05D004091 ORTHO05D004581 6.1e-39 164.5 133 60.2
COL.COLO4_19192 Corchorus olitorius HOM05D004091 ORTHO05D004581 1.4e-38 163.3 135 59.3
Glyma.13G322100 Glycine max HOM05D004091 ORTHO05D004581 2.3e-38 162.5 136 58.8
Lj3g0003103 Lotus japonicus HOM05D004091 ORTHO05D004581 3.9e-38 161.8 135 59.3
TWI79G0199 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 3.9e-38 161.8 135 57.8
Cfa001699 Carpinus fangiana HOM05D004091 ORTHO05D004581 6.7e-38 161.0 136 61.0
Phvul.005G130500 Phaseolus vulgaris HOM05D004091 ORTHO05D004581 8.8e-38 160.6 134 56.7
TWI79G0102 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 1.5e-37 159.8 135 57.0
VMungo1080G0687 Vigna mungo HOM05D004091 ORTHO05D004581 1.5e-37 159.8 134 56.0
Glyma.12G178500 Glycine max HOM05D004091 ORTHO05D004581 2.0e-37 159.5 135 57.8
TWI75G1803 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 2.0e-37 159.5 135 57.8
TPR.G21029 Trifolium pratense HOM05D004091 ORTHO05D004581 2.6e-37 159.1 134 58.2
Medtr4g057270 Medicago truncatula HOM05D004091 ORTHO05D004581 3.3e-37 158.7 134 56.0
Medtr2g084280 Medicago truncatula HOM05D004091 ORTHO05D004581 7.4e-37 157.5 134 57.5
Ca_01707_v3 Cicer arietinum L. HOM05D004091 ORTHO05D004581 9.7e-37 157.1 135 57.8
Haze_16835 Corylus avellana HOM05D004091 ORTHO05D004581 2.8e-36 155.6 136 58.1
Oeu007735.1 Olea europaea HOM05D004091 ORTHO05D004581 3.7e-36 155.2 135 58.5
Manes.11G152300 Manihot esculenta HOM05D004091 ORTHO05D004581 8.2e-36 154.1 134 59.0
Sabra09G0002900 Salix brachista HOM05D004091 ORTHO05D004581 1.1e-35 153.7 133 61.7
Ciclev10029784m.g Citrus clementina HOM05D004091 ORTHO05D004581 3.1e-35 152.1 134 55.2
Eucgr.B03931 Eucalyptus grandis HOM05D004091 ORTHO05D004581 4.1e-35 151.8 134 58.2
QL01p015070 Quercus lobata HOM05D004091 ORTHO05D004581 9.1e-35 150.6 136 55.9
Atru.chr3.3518 Acer truncatum HOM05D004091 ORTHO05D004581 1.6e-34 149.8 137 56.9
PGR102G0619 Punica granatum HOM05D004091 ORTHO05D004581 1.6e-34 149.8 138 58.7
THA.LOC104826386 Tarenaya hassleriana HOM05D004091 ORTHO05D004581 5.9e-34 147.9 135 55.6
Gohir.A09G088800 Gossypium hirsutum HOM05D004091 ORTHO05D004581 7.7e-34 147.5 135 54.1
arahy.Tifrunner.gnm1.ann1.H3UHY6 Arachis hypogaea HOM05D004091 ORTHO05D004581 1.7e-33 146.4 135 51.9
Ciclev10030052m.g Citrus clementina HOM05D004091 ORTHO05D004581 2.2e-33 146.0 135 57.0
Lalb_Chr22g0350411 Lupinus albus HOM05D004091 ORTHO05D004581 2.2e-33 146.0 135 54.1
Nn2g13852 Nelumbo nucifera HOM05D004091 ORTHO05D004581 2.2e-33 146.0 137 56.9
arahy.Tifrunner.gnm1.ann1.MIP29L Arachis hypogaea HOM05D004091 ORTHO05D004581 3.8e-33 145.2 135 51.9
AUR62014973 Chenopodium quinoa HOM05D004091 ORTHO05D004581 3.8e-33 145.2 136 51.5
Gorai.006G105000 Gossypium raimondii HOM05D004091 ORTHO05D004581 3.8e-33 145.2 134 54.5
MELO3C026952.2 Cucumis melo HOM05D004091 ORTHO05D004581 5.0e-33 144.8 136 57.4
Lj3g0002714 Lotus japonicus HOM05D004091 ORTHO05D004581 8.5e-33 144.1 134 51.5
CANSAT54G0269 Cannabis sativa HOM05D004091 ORTHO05D004581 2.5e-32 142.5 144 54.2
Sp4g10970 Schrenkiella parvula HOM05D004091 ORTHO05D004581 2.5e-32 142.5 135 54.1
Carub.0004s0898 Capsella rubella HOM05D004091 ORTHO05D004581 3.2e-32 142.1 135 53.3
Lalb_Chr24g0394931 Lupinus albus HOM05D004091 ORTHO05D004581 3.2e-32 142.1 135 51.9
CsaV3_6G014370 Cucumis sativus L. HOM05D004091 ORTHO05D004581 4.2e-32 141.7 136 55.9
Glyma.11G192800 Glycine max HOM05D004091 ORTHO05D004581 4.2e-32 141.7 135 52.6
Peaxi162Scf00530g00031 Petunia axillaris HOM05D004091 ORTHO05D004581 4.2e-32 141.7 135 51.1
FAN25G1486 Fragaria x ananassa HOM05D004091 ORTHO05D004581 5.5e-32 141.4 136 58.1
EL10Ac9g22622 Beta vulgaris HOM05D004091 ORTHO05D004581 7.2e-32 141.0 139 51.1
CARHR121010 Cardamine hirsuta HOM05D004091 ORTHO05D004581 7.2e-32 141.0 135 52.6
Aqoxy2G01663 Aquilegia oxysepala HOM05D004091 ORTHO05D004581 9.4e-32 140.6 139 51.1
Thhalv10016957m.g Eutrema salsugineum HOM05D004091 ORTHO05D004581 9.4e-32 140.6 135 53.3
Nn6g35240 Nelumbo nucifera HOM05D004091 ORTHO05D004581 9.4e-32 140.6 140 55.7
THA.LOC104800575 Tarenaya hassleriana HOM05D004091 ORTHO05D004581 9.4e-32 140.6 135 53.3
Lalb_Chr14g0374401 Lupinus albus HOM05D004091 ORTHO05D004581 1.2e-31 140.2 135 53.3
Nitab4.5_0001634g0050 Nicotiana tabacum HOM05D004091 ORTHO05D004581 2.1e-31 139.4 135 54.1
Aa31LG5G7980 Aethionema arabicum HOM05D004091 ORTHO05D004581 2.7e-31 139.0 139 51.1
AL4G21990 Arabidopsis lyrata HOM05D004091 ORTHO05D004581 2.7e-31 139.0 135 52.6
BolC4t23837H Brassica oleracea HOM05D004091 ORTHO05D004581 2.7e-31 139.0 135 54.8
DCAR_022765 Daucus carota HOM05D004091 ORTHO05D004581 2.7e-31 139.0 136 52.2
Migut.D02290 Erythranthe guttata HOM05D004091 ORTHO05D004581 3.6e-31 138.7 135 51.1
Nn6g35225 Nelumbo nucifera HOM05D004091 ORTHO05D004581 4.7e-31 138.3 140 55.0
Nitab4.5_0001634g0060 Nicotiana tabacum HOM05D004091 ORTHO05D004581 6.1e-31 137.9 135 52.6
BcaC02g10950 Brassica carinata HOM05D004091 ORTHO05D004581 8.0e-31 137.5 135 54.8
C04p23350 Brassica napus HOM05D004091 ORTHO05D004581 8.0e-31 137.5 135 54.8
FAN16G2177 Fragaria x ananassa HOM05D004091 ORTHO05D004581 8.0e-31 137.5 136 56.6
Prupe.6G112600 Prunus persica HOM05D004091 ORTHO05D004581 1.0e-30 137.1 138 53.6
MBI13_g13834_MAGBIO Magnolia biondii HOM05D004091 ORTHO05D004581 1.4e-30 136.7 140 52.9
A07p18700 Brassica napus HOM05D004091 ORTHO05D004581 2.3e-30 136.0 135 52.6
Cc01_g10310 Coffea canephora HOM05D004091 ORTHO05D004581 3.0e-30 135.6 135 54.1
Nitab4.5_0001897g0030 Nicotiana tabacum HOM05D004091 ORTHO05D004581 3.0e-30 135.6 135 51.9
AT2G28160 Arabidopsis thaliana HOM05D004091 ORTHO05D004581 4.0e-30 135.2 135 51.9
Migut.D02289 Erythranthe guttata HOM05D004091 ORTHO05D004581 4.0e-30 135.2 136 51.5
Peaxi162Scf00490g00018 Petunia axillaris HOM05D004091 ORTHO05D004581 4.0e-30 135.2 135 49.6
PGSC0003DMG400019017 Solanum tuberosum HOM05D004091 ORTHO05D004581 4.0e-30 135.2 142 50.7
Cpa.g.c28125.2 Carica papaya HOM05D004091 ORTHO05D004581 5.2e-30 134.8 135 51.1
Phvul.011G086200 Phaseolus vulgaris HOM05D004091 ORTHO05D004581 5.2e-30 134.8 134 50.7
PSO801G0814 Papaver somniferum HOM05D004091 ORTHO05D004581 8.8e-30 134.0 140 51.4
RcHm_v2.0_Chr5g0056871 Rosa chinensis HOM05D004091 ORTHO05D004581 8.8e-30 134.0 136 54.4
MSTRG.18701 Avicennia marina HOM05D004091 ORTHO05D004581 1.5e-29 133.3 142 50.0
BcaB01g03093 Brassica carinata HOM05D004091 ORTHO05D004581 1.5e-29 133.3 135 51.1
CAN.G246.1 Capsicum annuum HOM05D004091 ORTHO05D004581 2.0e-29 132.9 141 49.6
FvH4_3g30650 Fragaria vesca HOM05D004091 ORTHO05D004581 2.6e-29 132.5 136 52.9
BraA07t29581Z Brassica rapa HOM05D004091 ORTHO05D004581 3.3e-29 132.1 135 51.9
DCAR_006116 Daucus carota HOM05D004091 ORTHO05D004581 3.3e-29 132.1 136 49.3
MD03G1127500 Malus domestica HOM05D004091 ORTHO05D004581 3.3e-29 132.1 135 52.6
C03p31680 Brassica napus HOM05D004091 ORTHO05D004581 4.4e-29 131.7 135 51.1
FAN11G2030 Fragaria x ananassa HOM05D004091 ORTHO05D004581 4.4e-29 131.7 136 52.9
BcaB02g10153 Brassica carinata HOM05D004091 ORTHO05D004581 7.5e-29 131.0 135 53.3
HanXRQChr11g0346541 Helianthus annuus HOM05D004091 ORTHO05D004581 7.5e-29 131.0 134 48.5
Sopen06g017530 Solanum pennellii HOM05D004091 ORTHO05D004581 7.5e-29 131.0 142 49.3
BcaC02g08204 Brassica carinata HOM05D004091 ORTHO05D004581 1.7e-28 129.8 135 51.9
BolC4t27254H Brassica oleracea HOM05D004091 ORTHO05D004581 1.7e-28 129.8 135 51.9
BraA04t17704Z Brassica rapa HOM05D004091 ORTHO05D004581 1.7e-28 129.8 135 51.9
Migut.N02544 Erythranthe guttata HOM05D004091 ORTHO05D004581 1.7e-28 129.8 149 47.7
BcaB06g28191 Brassica carinata HOM05D004091 ORTHO05D004581 2.2e-28 129.4 137 51.8
MD03G1129100 Malus domestica HOM05D004091 ORTHO05D004581 2.2e-28 129.4 143 53.8
A03p26390 Brassica napus HOM05D004091 ORTHO05D004581 2.8e-28 129.0 135 50.4
BraA03t11854Z Brassica rapa HOM05D004091 ORTHO05D004581 2.8e-28 129.0 135 50.4
Nitab4.5_0000870g0060 Nicotiana tabacum HOM05D004091 ORTHO05D004581 2.8e-28 129.0 132 52.3
Atru.chr3.3512 Acer truncatum HOM05D004091 ORTHO05D004581 3.7e-28 128.6 135 51.9
BcaC01g04962 Brassica carinata HOM05D004091 ORTHO05D004581 3.7e-28 128.6 135 50.4
BolC3t15510H Brassica oleracea HOM05D004091 ORTHO05D004581 3.7e-28 128.6 135 50.4
A04p21360 Brassica napus HOM05D004091 ORTHO05D004581 4.8e-28 128.3 136 51.5
DCAR_006122 Daucus carota HOM05D004091 ORTHO05D004581 6.3e-28 127.9 138 50.0
C04p57310 Brassica napus HOM05D004091 ORTHO05D004581 8.2e-28 127.5 135 51.1
FvH4_3g30660 Fragaria vesca HOM05D004091 ORTHO05D004581 8.2e-28 127.5 136 52.9
Atru.chr3.3519 Acer truncatum HOM05D004091 ORTHO05D004581 1.1e-27 127.1 87 67.8
Solyc06g051550.4 Solanum lycopersicum HOM05D004091 ORTHO05D004581 1.1e-27 127.1 142 49.3
HanXRQChr11g0346631 Helianthus annuus HOM05D004091 ORTHO05D004581 1.8e-27 126.3 134 49.3
PSO801G0107 Papaver somniferum HOM05D004091 ORTHO05D004581 2.4e-27 125.9 135 48.9
VMungo1127G1339 Vigna mungo HOM05D004091 ORTHO05D004581 4.1e-27 125.2 134 47.8
CAN.G2082.3 Capsicum annuum HOM05D004091 ORTHO05D004581 9.1e-27 124.0 141 48.2
Ciclev10029810m.g Citrus clementina HOM05D004091 ORTHO05D004581 2.7e-26 122.5 133 51.9
Sed0002152 Sechium edule HOM05D004091 ORTHO05D004581 2.7e-26 122.5 96 60.4
Gohir.D09G088575 Gossypium hirsutum HOM05D004091 ORTHO05D004581 3.5e-26 122.1 117 53.8
CANSAT54G0298 Cannabis sativa HOM05D004091 ORTHO05D004581 5.9e-26 121.3 143 48.3
Lsat_1_v5_gn_1_64640 Lactuca sativa HOM05D004091 ORTHO05D004581 2.9e-25 119.0 134 47.8
HanXRQChr11g0346551 Helianthus annuus HOM05D004091 ORTHO05D004581 3.8e-25 118.6 134 46.3
Lj2C1007G8 Lonicera japonica HOM05D004091 ORTHO05D004581 3.8e-25 118.6 128 50.0
FAN21G0713 Fragaria x ananassa HOM05D004091 ORTHO05D004581 5.0e-25 118.2 146 49.3
HanXRQChr01g0019641 Helianthus annuus HOM05D004091 ORTHO05D004581 5.0e-25 118.2 135 47.4
PSO063G6410 Papaver somniferum HOM05D004091 ORTHO05D004581 6.5e-25 117.9 137 49.6
Glyma.12G081200 Glycine max HOM05D004091 ORTHO05D004581 4.2e-24 115.2 121 48.8
SalBow3G2912 Salvia bowleyana HOM05D004091 ORTHO05D004581 1.2e-23 113.6 140 47.9
HanXRQChr11g0346601 Helianthus annuus HOM05D004091 ORTHO05D004581 8.0e-23 110.9 134 42.5
PSO801G0681 Papaver somniferum HOM05D004091 ORTHO05D004581 1.0e-22 110.5 139 46.0
SalBow6G6360 Salvia bowleyana HOM05D004091 ORTHO05D004581 3.0e-22 109.0 142 44.4
ECA248G3340 Erigeron canadensis HOM05D004091 ORTHO05D004581 4.0e-22 108.6 140 45.7
MD03G1127600 Malus domestica HOM05D004091 ORTHO05D004581 3.4e-21 105.5 119 51.3
Ah.01g003340 Amaranthus hybridus HOM05D004091 ORTHO05D004581 9.8e-21 104.0 108 50.0
RcHm_v2.0_Chr5g0056881 Rosa chinensis HOM05D004091 ORTHO05D004581 2.8e-20 102.4 87 62.1
DCAR_032197 Daucus carota HOM05D004091 ORTHO05D004581 3.1e-19 99.0 91 51.6
ClCG02G021600 Citrullus lanatus HOM05D004091 ORTHO05D004581 9.1e-19 97.4 111 50.5
ATR0329G004 Amborella trichopoda HOM05D004091 ORTHO05D004581 3.5e-18 95.5 139 38.1
Peaxi162Scf00530g00066 Petunia axillaris HOM05D004091 ORTHO05D004581 5.0e-17 91.7 91 45.1
CDE04G2019 Ceratophyllum demersum HOM05D004091 ORTHO05D004581 1.9e-16 89.7 99 44.4
Hund01519 Selenicereus undatus HOM05D004091 ORTHO05D004581 2.3e-14 82.8 99 42.4
PSO339G2885 Papaver somniferum HOM05D004091 ORTHO05D004581 9.8e-13 77.4 135 35.6
HPP92_023195 Vanilla planifolia HOM05D004091 ORTHO05D004581 4.1e-11 72.0 139 36.7
unitig_899.g15363 Utricularia gibba HOM05D004091 ORTHO05D004581 1.7e-09 66.6 144 34.7
ATR0329G051 Amborella trichopoda HOM05D004091 ORTHO05D004581 2.5e-08 62.8 112 39.3
SEGI_19676 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 5.6e-08 61.6 144 31.9
SEGI_20940 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 5.6e-08 61.6 144 31.9
Actinidia07184 Actinidia chinensis HOM05D004091 ORTHO05D004581 8.9e-06 54.3 53 54.7


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