Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.6e-143 511.9 241 100.0
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 8.3e-121 437.2 231 90.5
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.6e-111 406.4 225 86.7
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.7e-111 405.6 225 86.7
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 3.3e-101 372.1 221 77.8
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 3.6e-100 368.6 246 72.4
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 6.8e-99 364.4 225 75.6
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 8.9e-99 364.0 236 72.5
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 2.0e-98 362.8 221 75.1
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 3.4e-98 362.1 225 73.3
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 6.4e-97 357.8 221 73.8
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 8.3e-97 357.5 231 70.1
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.4e-96 356.7 231 69.7
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 2.4e-96 355.9 221 74.7
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.2e-96 355.5 221 74.2
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 3.2e-96 355.5 236 68.6
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 4.1e-96 355.1 220 74.5
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 9.2e-96 354.0 237 70.9
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 1.6e-95 353.2 231 69.7
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 2.0e-95 352.8 221 71.5
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 2.7e-95 352.4 232 71.1
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 3.5e-95 352.1 235 70.2
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 4.6e-95 351.7 225 72.0
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 4.6e-95 351.7 235 70.2
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 7.8e-95 350.9 231 69.7
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.0e-94 350.5 255 65.1
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.3e-94 350.1 231 68.4
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 1.7e-94 349.7 219 73.5
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 1.7e-94 349.7 221 71.9
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 1.7e-94 349.7 225 71.6
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 2.3e-94 349.4 237 70.0
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 3.9e-94 348.6 221 71.5
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 6.6e-94 347.8 221 72.9
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 8.6e-94 347.4 221 71.5
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 8.6e-94 347.4 220 72.7
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 1.1e-93 347.1 237 68.4
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.5e-93 346.7 203 82.8
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 1.5e-93 346.7 231 67.1
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.9e-93 346.3 230 68.3
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.9e-93 346.3 220 72.3
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 3.3e-93 345.5 221 70.6
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 3.3e-93 345.5 221 71.9
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 4.3e-93 345.1 220 70.9
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 5.6e-93 344.7 221 71.0
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 7.3e-93 344.4 231 67.5
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 9.5e-93 344.0 221 71.9
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 9.5e-93 344.0 221 71.9
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 1.2e-92 343.6 220 73.2
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 1.6e-92 343.2 221 71.9
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 1.6e-92 343.2 237 66.7
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 2.1e-92 342.8 235 67.7
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.1e-92 342.8 235 67.7
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 2.1e-92 342.8 221 71.9
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 6.2e-92 341.3 221 70.6
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 6.2e-92 341.3 221 70.6
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 8.1e-92 340.9 221 69.2
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 8.1e-92 340.9 221 68.3
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 3.1e-91 339.0 231 65.8
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 4.0e-91 338.6 221 70.1
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 4.0e-91 338.6 231 66.7
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 5.2e-91 338.2 237 65.4
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 6.8e-91 337.8 231 66.7
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 6.8e-91 337.8 220 70.0
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 6.8e-91 337.8 239 66.1
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 8.9e-91 337.4 226 69.9
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.2e-90 337.0 221 70.1
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 1.2e-90 337.0 220 69.1
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 1.2e-90 337.0 231 66.2
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 1.5e-90 336.7 216 71.8
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 1.5e-90 336.7 219 69.9
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 2.0e-90 336.3 226 69.0
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 4.4e-90 335.1 219 69.9
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 5.8e-90 334.7 205 72.7
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 7.5e-90 334.3 220 70.0
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 1.3e-89 333.6 221 70.6
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 2.9e-89 332.4 220 69.5
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 2.9e-89 332.4 221 69.2
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 3.7e-89 332.0 231 64.1
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 4.9e-89 331.6 220 68.2
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 4.9e-89 331.6 225 68.4
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 6.4e-89 331.3 221 69.7
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 8.3e-89 330.9 220 66.8
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 8.3e-89 330.9 221 67.0
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 1.9e-88 329.7 205 70.2
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 7.1e-88 327.8 220 65.9
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 1.2e-87 327.0 229 67.7
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 1.6e-87 326.6 219 65.8
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 2.1e-87 326.2 246 61.8
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 2.1e-87 326.2 220 66.4
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 4.6e-87 325.1 220 68.6
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 6.0e-87 324.7 222 65.3
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 1.0e-86 323.9 221 64.7
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 1.0e-86 323.9 220 65.9
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 1.3e-86 323.6 221 64.7
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 1.7e-86 323.2 221 67.4
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 3.9e-86 322.0 224 65.2
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 8.6e-86 320.9 231 61.9
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 1.1e-85 320.5 217 66.8
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 1.5e-85 320.1 218 67.0
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 1.9e-85 319.7 250 59.2
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 1.9e-85 319.7 219 66.2
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 3.3e-85 318.9 220 65.5
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 1.6e-84 316.6 219 63.9
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 4.7e-84 315.1 220 65.5
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 6.2e-84 314.7 226 61.9
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 6.2e-84 314.7 226 61.9
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 8.1e-84 314.3 218 66.5
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.1e-83 313.9 231 61.5
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 1.8e-83 313.2 199 71.9
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 2.3e-83 312.8 243 65.4
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 2.3e-83 312.8 233 61.8
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.6e-82 309.3 164 87.2
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 7.6e-82 307.8 221 65.6
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 1.4e-80 303.5 309 50.2
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 8.6e-78 294.3 232 59.9
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.2e-76 290.4 217 59.9
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 1.6e-76 290.0 219 60.7
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 8.9e-75 284.3 221 61.1
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 2.6e-74 282.7 218 60.1
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 3.4e-74 282.3 219 56.6
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 9.9e-74 280.8 163 73.0
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.8e-73 278.9 155 83.9
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 2.4e-72 276.2 220 59.1
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 4.2e-72 275.4 219 59.8
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 9.3e-72 274.2 190 65.8
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 1.1e-64 250.8 222 56.3
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 6.7e-54 214.9 169 64.5
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 3.3e-53 212.6 220 48.6
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 2.1e-52 209.9 214 50.9
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 2.2e-49 199.9 265 42.3
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 7.1e-48 194.9 221 47.5
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 7.1e-48 194.9 221 45.7
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 3.1e-43 179.5 238 41.6
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 6.9e-35 151.8 221 42.1
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 3.4e-34 149.4 79 79.7
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 7.4e-21 105.1 261 28.4
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 2.8e-20 103.2 92 57.6
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 2.4e-19 100.1 53 81.1
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 6.5e-17 92.0 117 47.9
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 1.1e-16 91.3 148 37.8
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 8.0e-15 85.1 143 37.8
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 1.8e-14 84.0 66 56.1
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 4.0e-14 82.8 44 75.0
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 8.8e-14 81.6 47 76.6
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 1.2e-13 81.3 43 79.1
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 4.5e-10 69.3 40 77.5
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 2.1e-07 60.5 43 62.8


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