Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.5e-297 1025.4 502 100.0
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 8.2e-264 913.3 525 85.7
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 3.3e-249 864.8 532 80.6
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.2e-243 846.3 537 78.2
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.7e-243 845.1 537 77.8
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 6.1e-243 844.0 561 75.6
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.5e-241 839.3 546 76.9
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 4.8e-240 834.3 537 76.4
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.4e-239 832.0 528 77.7
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 3.5e-238 828.2 537 76.2
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 2.2e-237 825.5 544 75.4
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.2e-237 825.5 527 78.2
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 2.9e-237 825.1 537 76.4
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 2.5e-236 822.0 535 75.9
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 9.4e-236 820.1 537 76.0
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 1.2e-235 819.7 536 74.6
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.2e-233 813.1 529 76.7
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 2.2e-232 808.9 536 73.7
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.4e-231 806.2 528 75.2
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.4e-231 806.2 538 74.3
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 3.1e-231 805.1 530 75.7
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 7.0e-231 803.9 502 78.5
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 2.7e-230 802.0 543 74.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.3e-229 799.7 537 74.1
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.9e-229 798.5 537 74.3
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 1.5e-228 796.2 537 74.3
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.5e-228 796.2 537 73.4
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 4.7e-227 791.2 537 74.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.8e-226 789.3 504 76.6
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 3.0e-226 788.5 539 73.5
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.2e-225 786.6 537 73.0
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 4.1e-223 778.1 535 72.3
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 3.5e-222 775.0 620 65.3
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 5.9e-222 774.2 526 73.2
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.1e-220 770.0 538 72.5
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 3.6e-219 765.0 532 72.2
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 7.5e-217 757.3 525 71.8
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 9.8e-217 756.9 537 71.5
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.3e-216 756.5 530 69.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.8e-215 752.7 536 70.0
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 5.9e-214 747.7 530 71.5
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.7e-213 746.1 530 71.5
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 3.9e-213 745.0 615 64.2
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.9e-212 742.7 530 71.1
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 1.6e-211 739.6 533 70.2
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 4.7e-211 738.0 537 71.1
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 8.0e-211 737.3 526 70.2
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.4e-210 736.5 533 69.6
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 5.2e-210 734.6 540 68.7
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.5e-209 733.0 527 69.8
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 4.4e-209 731.5 545 68.6
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 7.5e-209 730.7 488 74.4
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.7e-208 729.6 535 68.6
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.4e-207 725.7 532 68.8
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 8.6e-205 717.2 537 67.6
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 8.6e-205 717.2 540 67.4
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 7.3e-204 714.1 544 66.5
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 9.5e-204 713.8 534 69.1
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 2.8e-203 712.2 540 67.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 2.3e-202 709.1 539 66.6
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 4.0e-202 708.4 539 66.4
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 5.2e-202 708.0 539 66.4
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 5.2e-202 708.0 450 76.7
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 6.8e-202 707.6 548 65.1
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.5e-201 706.4 540 66.5
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 2.6e-201 705.7 545 66.2
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 5.8e-201 704.5 539 66.0
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.3e-200 703.4 543 66.3
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.4e-199 699.1 569 62.7
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.4e-199 699.1 569 62.7
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 4.6e-198 694.9 546 65.2
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.2e-195 686.8 524 64.7
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 3.6e-195 685.3 474 73.0
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.1e-194 683.7 532 67.9
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 4.4e-193 678.3 525 66.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 8.4e-192 674.1 535 64.5
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 2.7e-190 669.1 486 67.7
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 6.0e-190 667.9 523 64.1
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 4.3e-188 661.8 522 63.0
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 5.6e-188 661.4 491 67.4
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.4e-186 656.0 504 66.7
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 7.6e-185 651.0 432 75.7
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.7e-181 637.5 588 58.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.3e-179 633.6 502 64.7
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.3e-179 633.6 650 53.1
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.0e-173 614.0 509 61.9
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.7e-171 605.5 412 74.5
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 3.7e-171 605.5 534 60.5
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 3.2e-167 592.4 448 67.0
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.3e-155 551.6 459 61.2
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 8.2e-155 551.2 541 52.5
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 7.4e-148 528.1 436 63.5
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 4.8e-147 525.4 332 78.9
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 6.5e-144 515.0 310 82.6
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 7.2e-143 511.5 289 84.1
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.0e-140 503.4 336 75.6
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 4.5e-129 465.7 271 81.9
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 7.7e-121 438.3 492 49.8
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 1.4e-117 427.6 243 81.9
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 4.5e-113 412.5 968 30.7
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 5.0e-112 409.1 361 59.8
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 7.2e-111 405.2 883 33.0
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 3.6e-110 402.9 961 30.9
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.7e-107 392.9 291 66.3
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.4e-106 391.0 845 33.3
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 9.2e-106 388.3 891 31.9
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 7.0e-98 362.1 211 83.9
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.8e-93 347.4 196 86.7
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.3e-93 347.1 311 60.1
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 5.2e-85 319.3 244 65.2
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 5.2e-77 292.7 252 61.1
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 2.4e-74 283.9 170 80.0
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 3.1e-61 240.4 286 48.6
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.4e-32 145.2 105 72.4
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 8.5e-27 125.9 106 64.2
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 4.5e-20 103.6 246 27.6
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 1.5e-18 98.6 68 70.6
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.8e-16 91.7 243 28.8
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 3.0e-16 90.9 302 24.2
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 5.9e-12 76.6 50 82.0
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 2.9e-11 74.3 84 52.4
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.5e-10 71.2 325 22.5
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.2e-09 68.9 48 72.9
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 1.2e-09 68.9 44 72.7
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 2.6e-07 61.2 50 60.0
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 3.7e-06 57.4 83 42.2


User provided reference genes

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