Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026086 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.5e-109 399.4 195 100.0
CSS0037899 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 8.0e-90 334.0 204 83.8
CSS0009757 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.7e-84 316.2 196 82.1
CSS0007096 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.9e-84 315.5 196 82.7
CSS0003920 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.6e-80 302.4 211 73.9
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.8e-79 298.9 194 79.4
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.8e-79 298.9 194 79.4
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 4.7e-74 281.6 193 76.2
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 2.3e-73 279.3 193 76.7
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 5.9e-69 264.6 193 70.5
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 2.9e-68 262.3 193 71.0
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 3.8e-68 261.9 195 70.3
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 8.6e-68 260.8 192 70.3
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 8.0e-66 254.2 192 68.2
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 1.4e-65 253.4 200 68.0
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 1.4e-65 253.4 192 68.8
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 4.0e-65 251.9 192 67.7
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 4.0e-65 251.9 193 66.8
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 4.0e-65 251.9 192 68.8
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 6.8e-65 251.1 199 65.3
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 8.9e-65 250.8 194 69.1
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 1.2e-64 250.4 200 64.0
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 1.2e-64 250.4 193 67.4
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 1.2e-64 250.4 193 67.4
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 1.5e-64 250.0 193 66.3
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 2.0e-64 249.6 192 67.7
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 5.7e-64 248.1 193 67.9
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 7.5e-64 247.7 210 64.3
Rhsim05G0129300 Rhododendron simsii HOM05D003926 ORTHO05D005273 1.7e-63 246.5 197 66.5
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 8.3e-63 244.2 193 64.2
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 1.8e-62 243.0 195 64.1
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 2.4e-62 242.7 193 66.8
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 4.1e-62 241.9 193 66.3
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 5.4e-62 241.5 193 64.8
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 5.4e-62 241.5 193 66.8
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 5.4e-62 241.5 195 66.2
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 7.0e-62 241.1 193 63.7
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 9.2e-62 240.7 193 66.3
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 9.2e-62 240.7 202 63.4
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 9.2e-62 240.7 193 65.8
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 2.0e-61 239.6 192 64.1
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 3.5e-61 238.8 194 65.5
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 7.8e-61 237.7 192 66.7
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 1.0e-60 237.3 193 64.2
Migut.H00584 Erythranthe guttata HOM05D003926 ORTHO05D005273 1.0e-60 237.3 193 64.2
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 1.0e-60 237.3 211 60.2
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 1.3e-60 236.9 201 62.2
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 1.7e-60 236.5 195 64.6
Glyma.08G252600 Glycine max HOM05D003926 ORTHO05D005273 1.7e-60 236.5 193 64.8
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 1.7e-60 236.5 193 64.8
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 2.3e-60 236.1 198 64.6
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 5.0e-60 235.0 194 63.9
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 5.0e-60 235.0 193 64.8
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 6.6e-60 234.6 193 63.7
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 1.2e-58 230.3 192 65.6
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 1.6e-58 229.9 192 63.0
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 1.6e-58 229.9 192 63.0
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 1.6e-58 229.9 191 61.3
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 2.1e-58 229.6 192 65.6
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 2.8e-58 229.2 194 64.4
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 4.7e-58 228.4 192 65.6
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 6.2e-58 228.0 209 58.9
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 6.2e-58 228.0 202 61.9
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 8.0e-58 227.6 193 64.2
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 1.1e-57 227.3 193 62.7
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 1.8e-57 226.5 194 63.9
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 1.8e-57 226.5 188 64.9
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 1.8e-57 226.5 188 64.9
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 4.0e-57 225.3 195 62.6
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 6.8e-57 224.6 193 62.2
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 1.2e-56 223.8 193 63.2
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 1.5e-56 223.4 193 62.2
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 2.6e-56 222.6 195 60.5
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 2.6e-56 222.6 193 61.7
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 3.4e-56 222.2 195 61.0
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 5.8e-56 221.5 195 61.0
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 5.8e-56 221.5 192 64.6
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 1.3e-55 220.3 210 59.5
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 1.7e-55 219.9 195 59.5
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 2.2e-55 219.5 195 60.5
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 2.4e-54 216.1 192 59.9
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 5.4e-54 214.9 208 56.7
BcaC05g30341 Brassica carinata HOM05D003926 ORTHO05D005273 5.4e-54 214.9 195 61.0
A05p45150 Brassica napus HOM05D003926 ORTHO05D005273 7.0e-54 214.5 195 60.5
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 1.2e-53 213.8 195 60.5
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 1.2e-53 213.8 195 60.5
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 2.0e-53 213.0 193 61.1
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 2.0e-53 213.0 193 61.1
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 1.0e-52 210.7 192 59.9
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 1.1e-51 207.2 201 57.2
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 1.1e-51 207.2 192 56.2
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 7.3e-51 204.5 194 57.7
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 1.6e-50 203.4 200 57.5
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 1.4e-49 200.3 193 56.5
CDE01G0304 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 1.8e-49 199.9 191 55.0
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 5.2e-49 198.4 192 53.1
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 2.9e-47 192.6 162 65.4
Psat6g077960 Pisum sativum HOM05D003926 ORTHO05D005273 3.0e-44 182.6 186 54.3
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 1.9e-43 179.9 194 52.1
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 1.6e-42 176.8 191 53.9
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.2e-39 166.4 195 49.7
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 2.4e-38 162.9 177 53.7
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.4e-38 162.9 195 48.7
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 3.3e-35 152.5 202 46.0
PGSC0003DMG401001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 1.2e-32 144.1 122 59.8
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 1.7e-31 140.2 140 54.3
Psat3g106080 Pisum sativum HOM05D003926 ORTHO05D005273 2.2e-31 139.8 139 58.3
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 6.4e-31 138.3 140 53.6
Psat5g059720 Pisum sativum HOM05D000434 ORTHO05D007220 3.2e-30 136.0 178 44.9
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 1.3e-28 130.6 65 87.7
Dinv33869 Davidia involucrata HOM05D003926 ORTHO05D005273 2.3e-28 129.8 88 78.4
AagrBONN_evm.TU.Sc2ySwM_344.3761 Anthoceros agrestis HOM05D003926 ORTHO05D005273 1.9e-27 126.7 180 44.4
Gohir.A07G179100 Gossypium hirsutum HOM05D003926 ORTHO05D005273 2.4e-25 119.8 82 68.3
Psat2g110320 Pisum sativum HOM05D003492 ORTHO05D005115 6.9e-25 118.2 129 53.5
Psat4g186360 Pisum sativum HOM05D003926 ORTHO05D005273 2.7e-21 106.3 65 69.2
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 1.8e-20 103.6 176 40.9
SHI25820 Sapria himalayana HOM05D003926 ORTHO05D005273 4.0e-17 92.4 111 48.6
Psat7g240480 Pisum sativum HOM05D000029 ORTHO05D037355 1.3e-07 60.8 37 75.7
Psat1g150120 Pisum sativum HOM05D003313 ORTHO05D004217 8.4e-07 58.2 37 70.3
Psat7g240520 Pisum sativum HOM05D000029 ORTHO05D037355 5.5e-06 55.5 32 78.1


User provided reference genes

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