Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.3e-144 514.6 253 100.0
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 2.4e-123 445.7 254 87.8
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.4e-123 445.7 252 86.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.5e-122 441.8 250 87.6
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.1e-120 436.8 254 86.2
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.4e-118 429.9 212 100.0
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.3e-116 423.3 249 86.3
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 4.9e-116 421.4 256 82.4
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 3.3e-112 408.7 249 79.9
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 7.4e-112 407.5 249 80.7
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 6.2e-111 404.4 251 78.5
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 1.1e-110 403.7 249 79.5
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.1e-110 403.7 250 81.2
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.8e-110 402.9 245 79.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 4.0e-110 401.7 252 80.2
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 4.0e-110 401.7 252 81.7
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 6.9e-110 401.0 252 80.2
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 6.9e-110 401.0 240 79.6
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.6e-109 399.1 253 76.7
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 3.4e-109 398.7 249 78.7
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 4.5e-109 398.3 251 77.7
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 9.9e-109 397.1 254 78.3
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.3e-108 396.7 247 78.9
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.7e-108 396.4 250 78.8
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 2.9e-108 395.6 248 78.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.8e-108 395.2 250 78.8
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 4.9e-108 394.8 257 77.8
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 6.4e-108 394.4 250 77.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 6.4e-108 394.4 258 77.1
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 6.4e-108 394.4 258 77.1
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.4e-107 393.3 255 76.5
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.4e-107 393.3 250 75.6
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.4e-107 393.3 247 80.2
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 2.4e-107 392.5 253 76.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.2e-107 392.1 257 77.0
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 4.2e-107 391.7 250 78.0
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 4.2e-107 391.7 256 75.8
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.3e-107 390.6 258 76.0
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 9.3e-107 390.6 247 79.4
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.1e-106 389.4 249 77.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 4.6e-106 388.3 248 76.2
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.0e-105 387.1 232 82.3
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.3e-105 386.7 253 75.5
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.8e-105 386.3 249 76.7
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 3.0e-105 385.6 257 75.5
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 5.1e-105 384.8 233 82.0
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 6.7e-105 384.4 248 75.0
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.7e-105 384.4 255 74.5
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 6.7e-105 384.4 249 76.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.1e-104 383.6 234 79.9
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 4.3e-104 381.7 255 74.1
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 4.3e-104 381.7 243 77.8
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 5.6e-104 381.3 237 78.5
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 9.6e-104 380.6 274 72.6
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.3e-103 380.2 253 76.7
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 2.8e-103 379.0 223 84.3
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 4.8e-103 378.3 252 74.6
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 6.2e-103 377.9 255 74.5
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.1e-102 377.1 242 76.9
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.4e-102 376.7 250 75.6
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.4e-102 376.7 244 77.9
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 5.3e-102 374.8 234 78.2
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.5e-101 373.2 255 72.2
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.5e-101 373.2 275 70.9
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 3.4e-101 372.1 253 71.9
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 3.4e-101 372.1 231 77.5
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.0e-100 370.5 229 77.3
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 2.9e-100 369.0 326 60.4
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 3.8e-100 368.6 250 72.8
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 6.5e-100 367.9 252 72.2
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 2.5e-99 365.9 239 74.5
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 3.2e-99 365.5 250 74.8
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.2e-99 365.5 248 75.4
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.2e-99 365.2 257 71.2
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 5.5e-99 364.8 248 71.4
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 7.1e-99 364.4 239 74.9
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 7.1e-99 364.4 213 83.6
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 7.1e-99 364.4 317 61.5
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 4.6e-98 361.7 211 81.5
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 7.9e-98 360.9 238 74.4
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.8e-97 359.8 261 69.7
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.8e-97 359.8 230 73.0
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 2.3e-97 359.4 259 68.7
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 3.0e-97 359.0 255 69.4
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 3.0e-97 359.0 255 69.4
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 5.1e-97 358.2 209 82.8
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 8.7e-97 357.5 265 68.3
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.1e-96 357.1 261 69.3
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 5.7e-96 354.8 257 68.9
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.3e-95 353.6 266 67.3
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.3e-95 353.6 246 69.1
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 2.1e-95 352.8 261 69.0
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.8e-94 349.7 232 75.4
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 4.5e-93 345.1 209 81.3
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.3e-92 343.6 209 80.4
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.3e-92 343.6 200 87.5
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 1.2e-90 337.0 252 69.4
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 4.6e-90 335.1 212 79.2
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.3e-89 333.6 216 74.5
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 9.7e-88 327.4 198 79.8
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 8.8e-81 304.3 202 72.3
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 5.9e-77 291.6 167 88.0
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 5.0e-76 288.5 336 51.8
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.6e-69 266.2 225 61.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.9e-68 262.7 175 74.9
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 3.2e-67 259.2 243 53.9
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.1e-62 244.2 157 76.4
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 5.9e-61 238.4 228 53.5
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 5.0e-60 235.3 235 51.5
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.4e-54 217.2 135 77.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.7e-52 210.3 137 78.8
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.9e-51 206.8 230 49.6
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.7e-47 193.7 146 67.1
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 6.3e-47 191.8 113 77.0
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 8.3e-47 191.4 146 66.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.2e-45 187.6 146 65.1
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 2.1e-42 176.8 118 78.0
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.4e-38 163.3 176 51.7
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 3.2e-38 162.9 96 82.3
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 5.0e-36 155.6 121 64.5
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 8.9e-33 144.8 95 75.8
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 6.4e-31 138.7 79 82.3
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 3.6e-26 122.9 108 56.5
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.8e-24 115.5 116 55.2
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 1.8e-17 94.0 47 87.2
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 3.5e-13 79.7 183 29.5
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 1.0e-12 78.2 40 92.5
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 8.7e-12 75.1 115 42.6
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 7.3e-11 72.0 115 41.7
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 8.4e-07 58.5 41 70.7


User provided reference genes

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