Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025900 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 5.5e-242 840.5 412 100.0
CSS0035836 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 8.9e-208 726.9 428 86.2
CSS0002149 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 3.6e-201 704.9 437 81.9
CSS0032349 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 1.6e-196 689.5 424 82.5
CSS0040705 Camellia sinensis var. sinensis HOM05D024541 ORTHO05D024705 4.7e-31 139.8 74 91.9
CSS0045207 Camellia sinensis var. sinensis HOM05D024541 ORTHO05D024705 3.3e-29 133.7 74 87.8
vmacro09225 Vaccinium macrocarpon HOM05D007651 ORTHO05D000898 5.2e-22 109.8 214 29.0
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 2.6e-21 107.5 211 29.4
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 3.3e-21 107.1 162 36.4
Rhsim02G0142200 Rhododendron simsii HOM05D007651 ORTHO05D000898 5.7e-21 106.3 162 35.8
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 7.5e-21 105.9 162 35.8
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 7.5e-21 105.9 162 35.8
Rhsim04G0060600 Rhododendron simsii HOM05D007651 ORTHO05D000898 2.8e-20 104.0 201 36.3
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 5.3e-19 99.8 207 28.0
Rhsim01G0159600 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.2e-18 98.6 186 32.8
Rhsim02G0161600 Rhododendron simsii HOM05D011344 ORTHO05D016379 4.0e-14 83.6 195 25.1
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 9.8e-13 79.0 241 25.3
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 6.3e-12 76.3 237 26.2
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 1.4e-11 75.1 269 23.4
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 4.1e-11 73.6 237 23.2
Rhsim06G0015800 Rhododendron simsii HOM05D066245 ORTHO05D024735 4.1e-11 73.6 66 56.1
RhsimUnG0074900 Rhododendron simsii HOM05D011344 ORTHO05D016379 4.1e-11 73.6 227 24.7
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 5.4e-11 73.2 238 23.9
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.6e-10 71.6 264 20.5
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 2.0e-10 71.2 205 23.9
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.0e-10 71.2 237 25.3
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 2.7e-10 70.9 264 20.8
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 3.5e-10 70.5 263 20.9
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 3.5e-10 70.5 265 20.4
Hma1.2p1_0381F.1_g139960 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 4.5e-10 70.1 237 24.1
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 5.9e-10 69.7 238 21.8
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 5.9e-10 69.7 265 20.0
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 7.7e-10 69.3 237 22.8
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 1.0e-09 68.9 231 23.8
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.3e-09 68.6 226 20.8
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 1.7e-09 68.2 238 21.4
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 2.9e-09 67.4 263 21.3
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 3.8e-09 67.0 237 23.2
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 5.0e-09 66.6 262 20.6
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 6.5e-09 66.2 238 20.6
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 1.1e-08 65.5 238 21.0
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 1.1e-08 65.5 254 22.4
QL03p022565 Quercus lobata HOM05D007651 ORTHO05D000898 1.5e-08 65.1 147 28.6
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 1.9e-08 64.7 169 24.3
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 1.9e-08 64.7 240 20.0
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 1.9e-08 64.7 232 21.1
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 2.5e-08 64.3 238 20.2
Rhsim02G0127200 Rhododendron simsii HOM05D011344 ORTHO05D016379 2.5e-08 64.3 172 30.8
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 3.2e-08 63.9 232 21.1
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 4.2e-08 63.5 205 22.0
Dinv09269 Davidia involucrata HOM05D008396 ORTHO05D000898 4.2e-08 63.5 199 23.6
Dinv13152 Davidia involucrata HOM05D008396 ORTHO05D000898 4.2e-08 63.5 199 23.6
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 4.2e-08 63.5 264 23.5
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 5.5e-08 63.2 227 26.4
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 5.5e-08 63.2 215 22.3
Dinv12671 Davidia involucrata HOM05D008396 ORTHO05D000898 5.5e-08 63.2 208 21.6
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 5.5e-08 63.2 231 23.8
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 7.2e-08 62.8 210 26.2
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 7.2e-08 62.8 238 23.5
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 9.5e-08 62.4 231 23.8
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 1.2e-07 62.0 211 21.3
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 1.6e-07 61.6 238 20.6
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 1.6e-07 61.6 238 22.7
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.1e-07 61.2 171 22.8
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.1e-07 61.2 170 22.9
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 2.1e-07 61.2 238 20.6
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 3.6e-07 60.5 237 21.5
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 3.6e-07 60.5 237 22.4
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 3.6e-07 60.5 232 20.3
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 3.6e-07 60.5 232 21.1
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 4.7e-07 60.1 239 19.2
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 4.7e-07 60.1 203 23.2
FAN05G4611 Fragaria x ananassa HOM05D000980 ORTHO05D000649 4.7e-07 60.1 130 23.8
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-06 58.5 199 23.1
Dinv14218 Davidia involucrata HOM05D008396 ORTHO05D000898 1.8e-06 58.2 205 20.0
Atru.chr13.1926 Acer truncatum HOM05D007651 ORTHO05D000898 3.0e-06 57.4 211 23.7
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 4.0e-06 57.0 166 27.1
AUR62017405 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.2e-06 56.6 114 30.7


User provided reference genes

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