Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025772 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.3e-128 463.0 231 100.0
CSS0013817 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 8.2e-102 374.0 230 81.3
CSS0018264 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 5.5e-98 361.3 232 79.7
CSS0007065 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 6.1e-97 357.8 228 78.5
CSS0006552 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 8.2e-94 347.4 232 78.9
CSS0003582 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.7e-86 323.2 230 71.3
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 7.3e-58 228.0 152 75.7
CSS0024495 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 2.9e-54 216.1 161 65.8
CSS0014448 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 3.2e-45 186.0 154 64.3
CSS0028595 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 4.0e-40 169.1 147 61.9
CSS0049846 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 9.9e-39 164.5 145 62.1
CSS0036293 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 7.8e-36 154.8 146 61.0
CSS0019235 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 7.3e-34 148.3 111 64.9
CSS0045163 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 7.3e-34 148.3 111 64.9
CSS0044758 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 6.9e-32 141.7 139 59.0
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 2.1e-28 130.2 241 36.5
CSS0018925 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 7.4e-26 121.7 91 64.8
CSS0046152 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 7.4e-26 121.7 147 46.9
Actinidia20119 Actinidia chinensis HOM05D010691 ORTHO05D008628 4.9e-22 109.0 131 48.1
CSS0045513 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 8.4e-22 108.2 90 61.1
CSS0041198 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 7.9e-20 101.7 73 63.0
CSS0008735 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 6.9e-16 88.6 59 66.1
CSS0048395 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 2.6e-15 86.7 76 55.3
CSS0008493 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 3.4e-15 86.3 59 64.4
CSS0009899 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 2.2e-14 83.6 117 44.4
MBI18_g24630_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 4.2e-13 79.3 100 46.0
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 5.5e-13 79.0 140 37.9
CSS0033110 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.6e-12 77.4 51 64.7
MBI17_g00994_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.6e-12 77.4 118 41.5
CSS0043930 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 2.1e-12 77.0 68 55.9
Dinv23015 Davidia involucrata HOM05D012821 ORTHO05D008628 7.9e-12 75.1 122 40.2
CSS0041107 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.0e-11 74.7 55 58.2
MBI05_g23627_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.8e-11 73.9 119 38.7
CSS0027057 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.3e-11 73.6 70 52.9
Dinv04833 Davidia involucrata HOM05D013497 ORTHO05D008628 6.7e-11 72.0 84 45.2
MBI10_g31175_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.1e-10 71.2 118 35.6
MBI11_g15179_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.9e-10 70.5 107 40.2
MBI17_g23155_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 3.3e-10 69.7 119 34.5
Dinv05537 Davidia involucrata HOM05D041055 ORTHO05D008628 4.3e-10 69.3 111 40.5
TAR697G0001 Trochodendron aralioides HOM05D000047 ORTHO05D000589 4.3e-10 69.3 102 36.3
MBI13_g19838_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 5.7e-10 68.9 84 41.7
CSS0006900 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 7.4e-10 68.6 51 56.9
MBI14_g46090_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 7.4e-10 68.6 72 48.6
CSS0014257 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.3e-09 67.8 52 57.7
SGA_v2.0_scaffold601G53143 Striga asiatica HOM05D010691 ORTHO05D008628 1.3e-09 67.8 49 63.3
CSS0027761 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 2.2e-09 67.0 49 59.2
Dinv11091 Davidia involucrata HOM05D013497 ORTHO05D008628 2.8e-09 66.6 211 31.3
CSS0033289 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 3.7e-09 66.2 52 57.7
Sopen12g018760 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-09 65.9 178 31.5
MBI16_g17767_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 6.3e-09 65.5 141 35.5
MBI14_g35940_MAGBIO Magnolia biondii HOM05D007969 ORTHO05D008628 8.2e-09 65.1 84 42.9
Sopen11g023720 Solanum pennellii HOM05D000047 ORTHO05D000044 8.2e-09 65.1 134 35.1
MBI18_g12424_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.4e-08 64.3 74 45.9
MBI05_g38502_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.8e-08 63.9 74 44.6
MBI18_g44495_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.8e-08 63.9 73 46.6
Sopen00g007140 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-08 63.5 113 35.4
Sopen05g027550 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-08 63.5 113 35.4
Dinv10876 Davidia involucrata HOM05D000047 ORTHO05D008628 3.1e-08 63.2 155 30.3
Sopen00g004220 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-08 63.2 113 35.4
Sopen00g005610 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-08 63.2 113 34.5
Sopen09g010970 Solanum pennellii HOM05D000014 ORTHO05D000093 4.1e-08 62.8 113 35.4
Sopen07g007700 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-08 62.4 113 34.5
Sopen10g014590 Solanum pennellii HOM05D000047 ORTHO05D000589 5.3e-08 62.4 94 42.6
Sopen10g024660 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-08 62.4 130 35.4
PGSC0003DMG400033678 Solanum tuberosum HOM05D000047 ORTHO05D000589 5.3e-08 62.4 94 41.5
MBI11_g38181_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 6.9e-08 62.0 94 37.2
Sopen05g011250 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-08 62.0 113 36.3
MBI13_g38682_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 9.0e-08 61.6 65 49.2
Sopen01g016360 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-08 61.6 113 35.4
Sopen03g025010 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-07 61.2 113 34.5
Sopen04g026920 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-07 61.2 113 34.5
Sopen09g029500 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-07 60.8 113 34.5
Sopen12g017070 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-07 60.8 113 35.4
Dinv04982 Davidia involucrata HOM05D012821 ORTHO05D001422 2.0e-07 60.5 188 33.0
Sopen01g009320 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-07 60.5 56 53.6
Sopen02g019110 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-07 60.5 113 34.5
Sopen05g010730 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-07 60.5 109 37.6
Sopen10g014420 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-07 60.1 111 36.0
MBI09_g26110_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.4e-07 59.7 87 40.2
MBI16_g29128_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.4e-07 59.7 98 39.8
PGR044G1493 Punica granatum HOM05D000047 ORTHO05D000589 3.4e-07 59.7 216 27.8
Sopen03g015560 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-07 59.7 114 35.1
Sopen11g013030 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-07 59.7 195 27.7
MBI19_g16318_MAGBIO Magnolia biondii HOM05D007969 ORTHO05D008628 4.5e-07 59.3 52 50.0
Nitab4.5_0002656g0090 Nicotiana tabacum HOM05D000047 ORTHO05D000589 4.5e-07 59.3 87 42.5
Sopen04g014710 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-07 59.3 114 36.0
Sopen05g022380 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-07 59.3 113 34.5
Sopen09g013810 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-07 59.3 195 30.3
Sopen11g015560 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-07 59.3 82 42.7
PGSC0003DMG400002247 Solanum tuberosum HOM05D000047 ORTHO05D000589 4.5e-07 59.3 140 30.0
MBI14_g45553_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 5.9e-07 58.9 66 47.0
PGR004G2751 Punica granatum HOM05D000047 ORTHO05D000589 5.9e-07 58.9 131 32.8
PGR042G4001 Punica granatum HOM05D000047 ORTHO05D000589 5.9e-07 58.9 127 33.1
Sopen01g018900 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-07 58.9 113 33.6
Sopen03g027390 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-07 58.9 111 34.2
Sopen04g012740 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-07 58.9 92 39.1
Sopen05g012300 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-07 58.9 112 33.9
Sopen05g013770 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-07 58.9 113 34.5
Sopen06g009420 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-07 58.9 113 32.7
Sopen06g011500 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-07 58.9 113 33.6
PGR119G1948 Punica granatum HOM05D000047 ORTHO05D000589 7.7e-07 58.5 149 31.5
Sopen00g013170 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-07 58.5 94 40.4
Sopen06g010190 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-07 58.5 92 39.1
Sopen07g015770 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-07 58.5 99 37.4
Sopen10g014790 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-07 58.5 113 33.6
PGR004G0317 Punica granatum HOM05D000047 ORTHO05D007790 1.0e-06 58.2 149 31.5
Sopen05g026280 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 113 35.4
Sopen06g007770 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 99 35.4
Sopen07g014290 Solanum pennellii HOM05D000047 ORTHO05D000589 1.0e-06 58.2 82 41.5
Sopen07g018610 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 142 32.4
Sopen09g008810 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 82 42.7
Sopen10g013130 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 117 36.8
Sopen11g023390 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 82 42.7
Sopen12g011360 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-06 58.2 164 30.5
MBI17_g01776_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.3e-06 57.8 61 47.5
Nn3g20114 Nelumbo nucifera HOM05D057888 ORTHO05D008628 1.3e-06 57.8 128 37.5
PGR119G2436 Punica granatum HOM05D000047 ORTHO05D000044 1.3e-06 57.8 110 35.5
Sopen09g026320 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 57.8 113 34.5
Nn2g14688 Nelumbo nucifera HOM05D014704 ORTHO05D008628 1.7e-06 57.4 77 40.3
PGR044G1494 Punica granatum HOM05D000047 ORTHO05D000589 1.7e-06 57.4 149 30.9
Sopen07g017990 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-06 57.4 111 34.2
Sopen02g001130 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-06 57.0 215 26.0
Sopen05g010710 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-06 57.0 64 48.4
Sopen12g009400 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-06 57.0 187 28.3
Sopen12g009930 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-06 57.0 202 29.2
MBI14_g02285_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 2.9e-06 56.6 48 52.1
Sopen04g022390 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-06 56.6 111 33.3
Sopen06g006330 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-06 56.6 123 32.5
Sopen06g012960 Solanum pennellii HOM05D000047 ORTHO05D000589 2.9e-06 56.6 83 42.2
Sopen08g023600 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-06 56.6 113 33.6
PGSC0003DMG400019609 Solanum tuberosum HOM05D000047 ORTHO05D015746 2.9e-06 56.6 97 36.1
PGSC0003DMG400024383 Solanum tuberosum HOM05D000047 ORTHO05D000589 2.9e-06 56.6 82 42.7
PGR142G1178 Punica granatum HOM05D000047 ORTHO05D000589 3.8e-06 56.2 150 31.3
Sopen05g014640 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-06 56.2 111 34.2
Sopen08g017440 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-06 56.2 103 35.0
Sopen09g009160 Solanum pennellii HOM05D000047 ORTHO05D000044 3.8e-06 56.2 195 27.2
PGR031G0507 Punica granatum HOM05D000047 ORTHO05D000589 5.0e-06 55.8 131 32.1
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 5.0e-06 55.8 119 37.0
Sopen00g003940 Solanum pennellii HOM05D000047 ORTHO05D000044 5.0e-06 55.8 52 51.9
Sopen03g009040 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-06 55.8 54 50.0
Sopen09g017590 Solanum pennellii HOM05D000047 ORTHO05D000044 5.0e-06 55.8 82 41.5
Sopen12g015290 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-06 55.8 86 37.2
PGR031G1972 Punica granatum HOM05D000047 ORTHO05D000589 6.5e-06 55.5 149 32.2
PGR031G2812 Punica granatum HOM05D000047 ORTHO05D007790 6.5e-06 55.5 149 30.2
Sopen01g020830 Solanum pennellii HOM05D000047 ORTHO05D000589 6.5e-06 55.5 90 38.9
Sopen07g020210 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-06 55.5 113 33.6
Sopen01g027790 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-06 55.1 112 33.9
Sopen01g027800 Solanum pennellii HOM05D000047 ORTHO05D000044 8.5e-06 55.1 186 26.9
Sopen03g017560 Solanum pennellii HOM05D000047 ORTHO05D000044 8.5e-06 55.1 195 27.7
Sopen05g012080 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-06 55.1 107 34.6
Sopen07g005350 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-06 55.1 106 34.9
Sopen11g018810 Solanum pennellii HOM05D000047 ORTHO05D000044 8.5e-06 55.1 90 37.8
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 8.5e-06 55.1 184 28.8


User provided reference genes

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