Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 1.3e-78 296.6 179 100.0
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 1.7e-41 173.3 133 84.2
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 5.3e-40 168.3 133 81.2
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.5e-39 166.8 142 75.4
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 2.6e-39 166.0 133 78.2
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 5.9e-39 164.9 142 74.6
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 1.1e-37 160.6 134 76.9
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 1.4e-37 160.2 134 76.1
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.9e-37 159.8 145 75.2
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 3.2e-37 159.1 130 76.2
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 3.2e-37 159.1 136 77.9
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 4.2e-37 158.7 141 73.0
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.2e-37 158.7 140 75.0
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 7.2e-37 157.9 146 72.6
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.6e-36 156.8 134 72.4
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 2.1e-36 156.4 135 65.2
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 2.7e-36 156.0 136 52.9
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 4.7e-36 155.2 144 70.8
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 6.1e-36 154.8 130 79.2
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 6.1e-36 154.8 134 71.6
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 6.1e-36 154.8 140 72.9
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 7.9e-36 154.5 141 71.6
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 7.9e-36 154.5 139 72.7
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 7.9e-36 154.5 134 73.9
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 1.0e-35 154.1 139 71.2
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 1.4e-35 153.7 138 74.6
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 1.4e-35 153.7 142 69.7
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.8e-35 153.3 139 73.4
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.8e-35 153.3 139 73.4
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.3e-35 152.9 137 74.5
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 2.3e-35 152.9 142 69.0
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 3.0e-35 152.5 135 71.9
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 3.9e-35 152.1 142 69.7
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 8.8e-35 151.0 142 69.7
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 1.5e-34 150.2 141 71.6
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 1.5e-34 150.2 129 75.2
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 2.0e-34 149.8 134 76.9
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.6e-34 149.4 135 65.2
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 3.3e-34 149.1 136 75.0
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 4.4e-34 148.7 138 72.5
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 7.4e-34 147.9 134 75.4
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 2.2e-33 146.4 136 71.3
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 2.8e-33 146.0 134 75.4
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 3.7e-33 145.6 139 69.1
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 1.4e-32 143.7 135 70.4
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 1.8e-32 143.3 130 71.5
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 2.4e-32 142.9 132 70.5
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 2.4e-32 142.9 134 73.9
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 2.4e-32 142.9 86 74.4
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 4.1e-32 142.1 135 69.6
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 4.1e-32 142.1 134 62.7
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 5.3e-32 141.7 134 62.7
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 7.0e-32 141.4 130 70.8
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 9.1e-32 141.0 130 70.8
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 9.1e-32 141.0 136 70.6
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 1.2e-31 140.6 122 78.7
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 2.6e-31 139.4 129 72.1
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 3.5e-31 139.0 134 67.9
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 5.9e-31 138.3 125 52.8
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 7.7e-31 137.9 134 71.6
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 7.7e-31 137.9 135 68.1
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 7.7e-31 137.9 137 51.8
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 1.0e-30 137.5 127 73.2
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 1.3e-30 137.1 132 68.9
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 1.7e-30 136.7 119 77.3
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 5.0e-30 135.2 85 75.3
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 5.0e-30 135.2 138 66.7
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 1.9e-29 133.3 130 69.2
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 3.2e-29 132.5 130 68.5
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 1.2e-28 130.6 136 64.7
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.6e-28 130.2 134 64.2
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 2.1e-28 129.8 101 91.1
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 4.7e-28 128.6 130 69.2
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 8.0e-28 127.9 132 65.9
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 1.4e-27 127.1 128 71.9
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 1.4e-27 127.1 135 65.2
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 1.8e-27 126.7 130 63.1
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 1.8e-27 126.7 127 73.2
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 2.3e-27 126.3 91 58.2
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 3.9e-27 125.6 121 71.9
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 3.9e-27 125.6 127 66.9
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 1.1e-26 124.0 134 61.9
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 1.5e-26 123.6 133 63.9
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 1.5e-26 123.6 133 63.9
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 2.0e-26 123.2 129 67.4
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 2.6e-26 122.9 83 63.9
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 9.7e-26 120.9 127 65.4
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 1.7e-25 120.2 113 54.9
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 3.7e-25 119.0 127 63.0
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 8.2e-25 117.9 85 57.6
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 3.1e-24 115.9 135 51.9
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 1.2e-23 114.0 140 42.1
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 2.6e-23 112.8 135 51.9
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 3.5e-23 112.5 142 40.8
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 5.9e-23 111.7 142 59.2
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 1.3e-22 110.5 142 58.5
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 2.2e-22 109.8 142 57.7
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 2.9e-22 109.4 116 68.1
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 2.9e-22 109.4 142 58.5
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 5.0e-22 108.6 133 60.2
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 8.5e-22 107.8 125 64.8
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 1.9e-21 106.7 132 61.4
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 1.9e-21 106.7 132 61.4
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 9.4e-21 104.4 142 54.2
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 2.1e-20 103.2 134 61.9
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 6.1e-20 101.7 128 56.2
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 8.0e-20 101.3 119 56.3
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 2.3e-19 99.8 121 55.4
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 3.0e-19 99.4 132 47.7
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 5.2e-19 98.6 142 51.4
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 5.2e-19 98.6 136 52.9
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 2.6e-18 96.3 132 54.5
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 1.2e-15 87.4 116 49.1
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 3.5e-15 85.9 96 59.4
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 1.7e-14 83.6 127 52.0
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 5.0e-14 82.0 61 60.7
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 6.5e-14 81.6 119 40.3
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 6.5e-14 81.6 119 40.3
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 6.5e-14 81.6 119 40.3
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.9e-13 80.1 96 44.8
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 2.5e-13 79.7 122 37.7
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 4.2e-13 79.0 121 38.0
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 4.2e-13 79.0 121 38.0
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 5.5e-13 78.6 125 48.0
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 2.1e-12 76.6 119 36.1
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 2.7e-12 76.3 110 38.2
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 3.6e-12 75.9 67 52.2
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 5.7e-10 68.6 87 41.4
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 8.3e-09 64.7 98 45.9
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 2.7e-07 59.7 130 39.2
Hma1.2p1_1820F.1_g304180 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 3.8e-06 55.8 65 86.2


User provided reference genes

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