Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 2.9e-70 268.5 136 100.0
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.5e-42 176.4 142 71.8
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 2.8e-33 145.6 105 77.1
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 5.3e-32 141.4 126 69.0
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 7.9e-28 127.5 102 71.6
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.2e-25 119.4 102 67.6
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 2.8e-25 119.0 109 60.6
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 3.7e-25 118.6 111 64.9
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 3.7e-25 118.6 114 64.0
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 6.3e-25 117.9 105 64.8
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 2.4e-24 115.9 116 59.5
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.4e-24 115.9 106 63.2
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 9.0e-24 114.0 103 65.0
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 1.5e-23 113.2 117 59.0
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.7e-22 109.8 113 61.1
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.9e-22 109.0 117 59.8
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 5.0e-22 108.2 128 56.2
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 5.0e-22 108.2 110 59.1
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.4e-21 106.7 99 60.6
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 1.4e-21 106.7 74 67.6
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 5.5e-21 104.8 119 56.3
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 7.2e-21 104.4 104 63.5
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 7.2e-21 104.4 109 57.8
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 9.4e-21 104.0 119 54.6
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 2.1e-20 102.8 113 56.6
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 2.7e-20 102.4 99 59.6
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 4.6e-20 101.7 99 58.6
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 7.9e-20 100.9 112 56.2
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 1.0e-19 100.5 110 57.3
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-19 100.5 100 57.0
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-19 100.5 100 57.0
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.0e-19 100.5 100 57.0
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.8e-19 99.8 101 57.4
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 3.0e-19 99.0 106 59.4
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 3.9e-19 98.6 107 55.1
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.9e-19 98.6 108 57.4
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.9e-19 98.6 108 57.4
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 3.9e-19 98.6 61 83.6
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 3.9e-19 98.6 117 52.1
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 5.1e-19 98.2 111 59.5
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 6.7e-19 97.8 76 64.5
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 8.8e-19 97.4 107 57.0
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 8.8e-19 97.4 98 60.2
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 1.1e-18 97.1 99 62.6
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.1e-18 97.1 94 56.4
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.1e-18 97.1 108 56.5
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.5e-18 96.7 60 83.3
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.5e-18 96.7 104 59.6
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.5e-18 96.7 95 57.9
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.5e-18 96.7 80 65.0
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.9e-18 96.3 108 56.5
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 4.3e-18 95.1 87 62.1
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 5.7e-18 94.7 108 54.6
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 5.7e-18 94.7 110 51.8
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 7.4e-18 94.4 105 60.0
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 7.4e-18 94.4 111 55.9
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.3e-17 93.6 61 73.8
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 1.7e-17 93.2 108 56.5
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.7e-17 93.2 113 54.9
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.7e-17 93.2 106 56.6
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 2.8e-17 92.4 106 55.7
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 4.8e-17 91.7 108 55.6
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 4.8e-17 91.7 116 54.3
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 6.3e-17 91.3 104 54.8
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 6.3e-17 91.3 97 54.6
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 6.3e-17 91.3 104 51.0
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.2e-17 90.9 107 53.3
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 8.2e-17 90.9 105 59.0
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.1e-16 90.5 109 54.1
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.4e-16 90.1 106 57.5
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.8e-16 89.7 102 58.8
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.8e-16 89.7 102 58.8
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.8e-16 89.7 102 58.8
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.8e-16 89.7 74 64.9
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.8e-16 89.7 95 56.8
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 3.1e-16 89.0 110 53.6
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 6.9e-16 87.8 62 72.6
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 9.1e-16 87.4 103 55.3
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.2e-15 87.0 110 52.7
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.5e-15 86.7 59 72.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 2.0e-15 86.3 101 59.4
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 2.6e-15 85.9 59 71.2
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.4e-15 85.5 69 68.1
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 3.4e-15 85.5 110 55.5
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 4.5e-15 85.1 100 58.0
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 7.7e-15 84.3 102 52.0
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.0e-14 84.0 104 54.8
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.7e-14 83.2 59 69.5
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 1.7e-14 83.2 105 56.2
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 1.7e-14 83.2 108 52.8
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 3.8e-14 82.0 110 54.5
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 3.8e-14 82.0 112 52.7
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 3.8e-14 82.0 103 55.3
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 5.0e-14 81.6 106 56.6
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.1e-13 80.5 59 76.3
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.5e-13 79.3 52 69.2
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 3.2e-13 79.0 50 76.0
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 7.2e-13 77.8 105 50.5
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.2e-12 77.0 101 50.5
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 4.7e-12 75.1 50 68.0
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 6.1e-12 74.7 95 47.4
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.1e-10 70.5 43 76.7
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 5.7e-10 68.2 48 77.1
Pp3c2_27910 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.3e-09 67.0 94 41.5
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 4.8e-09 65.1 73 56.2
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.8e-08 63.2 85 45.9
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 7.7e-07 57.8 28 92.9
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.3e-06 57.0 29 86.2
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 1.7e-06 56.6 98 43.9
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 2.9e-06 55.8 27 92.6


User provided reference genes

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