Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025197 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 7.9e-67 256.9 125 100.0
CSS0041698 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 2.2e-64 248.8 125 97.6
CSS0026871 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.1e-63 246.5 125 96.0
CSS0020036 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.8e-63 245.7 125 96.0
Manes.15G193301 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.18G143401 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S001635 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S003597 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S004905 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S005886 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S007848 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S011772 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S015696 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S017986 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S020275 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S024052 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S024852 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S025016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S026216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S026252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S026952 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S027016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S027516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S029252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S030016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S030252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S031516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S031716 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S032416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S033816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S034816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S035416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S036516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S036816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S037516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S039116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S041116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S041816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S043216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S043916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S045216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S046916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S048416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S049316 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S051116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S051616 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S052516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S053016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S053216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
Manes.S054816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.1e-63 244.6 125 96.0
CSS0050263 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.5e-62 242.7 125 96.8
Manes.S028116 Manihot esculenta HOM05D001018 ORTHO05D000626 2.0e-62 242.3 125 95.2
ScUNg0001640 Simmondsia chinensis HOM05D001018 ORTHO05D000626 2.0e-62 242.3 125 95.2
CSS0000564 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 5.9e-62 240.7 125 94.4
Gorai.001G276600 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.9e-62 240.7 125 94.4
Gorai.001G276700 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.9e-62 240.7 125 94.4
Gorai.001G276800 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.9e-62 240.7 125 94.4
Atru.chr6.2695 Acer truncatum HOM05D001018 ORTHO05D000626 1.0e-61 240.0 125 94.4
QL11p027314 Quercus lobata HOM05D001018 ORTHO05D000626 2.9e-61 238.4 124 94.4
Sopen00g002220 Solanum pennellii HOM05D001018 ORTHO05D000626 5.0e-61 237.7 125 93.6
PGSC0003DMG402019042 Solanum tuberosum HOM05D001018 ORTHO05D000626 5.0e-61 237.7 125 93.6
CiPaw.05G154900 Carya illinoinensis HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
CiPaw.05G155900 Carya illinoinensis HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
CiPaw.15G103300 Carya illinoinensis HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
Potri.008G224210 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
Potri.014G185588 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
Potri.014G185804 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
Potri.014G186452 Populus trichocarpa HOM05D001018 ORTHO05D000626 6.5e-61 237.3 125 93.6
Migut.A01079 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.5e-61 236.9 125 93.6
Migut.A01234 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.5e-61 236.9 125 93.6
Migut.A01241 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.5e-61 236.9 125 93.6
Migut.G00890 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.5e-61 236.9 125 93.6
Migut.A01240 Erythranthe guttata HOM05D001018 ORTHO05D000626 4.2e-60 234.6 125 92.8
Manes.S033916 Manihot esculenta HOM05D001018 ORTHO05D000626 7.2e-60 233.8 125 92.8
CiPaw.15G104700 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.7e-59 231.1 125 92.0
Manes.S029752 Manihot esculenta HOM05D001018 ORTHO05D000626 1.0e-58 229.9 121 92.6
Manes.S032916 Manihot esculenta HOM05D001018 ORTHO05D000626 1.0e-58 229.9 121 92.6
Migut.C00303 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.0e-57 225.7 120 93.3
unitig_670.g34683 Utricularia gibba HOM05D001018 ORTHO05D000626 4.4e-57 224.6 125 89.6
Migut.A01193 Erythranthe guttata HOM05D001018 ORTHO05D000626 4.8e-56 221.1 125 88.0
Migut.A01196 Erythranthe guttata HOM05D001018 ORTHO05D000626 4.8e-56 221.1 125 88.0
Atru.chr10.41 Acer truncatum HOM05D001018 ORTHO05D000626 3.5e-54 214.9 125 86.4
Migut.A01194 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.8e-53 211.5 125 85.6
Sopen07g009480 Solanum pennellii HOM05D001018 ORTHO05D000626 5.5e-52 207.6 125 84.8
Migut.A01220 Erythranthe guttata HOM05D001018 ORTHO05D000626 7.2e-52 207.2 108 93.5
CiPaw.05G156000 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.0e-49 199.1 105 92.4
unitig_581.g33720 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-49 197.6 123 83.7
CiPaw.15G105700 Carya illinoinensis HOM05D001018 ORTHO05D000626 7.5e-49 197.2 105 91.4
Migut.A01245 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.4e-47 192.2 101 92.1
Sed0017842 Sechium edule HOM05D001018 ORTHO05D000626 3.5e-46 188.3 98 91.8
ScUNg0001590 Simmondsia chinensis HOM05D001018 ORTHO05D000626 4.5e-46 188.0 127 78.7
Migut.A01232 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.0e-38 162.5 88 92.0
unitig_685.g33146 Utricularia gibba HOM05D001018 ORTHO05D000626 1.0e-37 160.2 122 72.1
unitig_721.g34549 Utricularia gibba HOM05D001018 ORTHO05D000626 1.1e-36 156.8 129 69.8
HPP92_020620 Vanilla planifolia HOM05D000099 ORTHO05D000205 4.2e-36 154.8 98 81.6
Glyma.U009202 Glycine max HOM05D001018 ORTHO05D000626 1.6e-35 152.9 98 78.6
Migut.A01215 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.1e-35 152.5 77 93.5
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 5.4e-31 137.9 90 78.9
LjContig00006g0002932 Lotus japonicus HOM05D001018 ORTHO05D002636 1.1e-28 130.2 124 62.1
LjContig00488g0014329 Lotus japonicus HOM05D001018 ORTHO05D002636 1.1e-28 130.2 124 62.1
unitig_102.g31708 Utricularia gibba HOM05D001018 ORTHO05D000626 1.2e-27 126.7 90 74.4
Sopen00g013130 Solanum pennellii HOM05D001018 ORTHO05D000626 2.3e-26 122.5 65 93.8
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 4.0e-26 121.7 84 70.2
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-26 121.7 74 82.4
unitig_885.g34269 Utricularia gibba HOM05D001018 ORTHO05D000626 4.4e-25 118.2 94 69.1
Cpa.g.sc2112.2 Carica papaya HOM05D001018 ORTHO05D000626 2.2e-24 115.9 73 82.2
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 8.3e-24 114.0 85 68.2
Zm00001eb264030 Zea mays HOM05D001018 ORTHO05D000626 3.5e-22 108.6 72 81.9
unitig_172.g35454 Utricularia gibba HOM05D001018 ORTHO05D000626 5.4e-15 84.7 122 48.4
CiPaw.05G153900 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.1e-14 82.8 45 91.1
Phvul.011G157400 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 3.3e-12 75.5 32 96.9
Phvul.002G055350 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 7.3e-12 74.3 52 73.1
Sopen00g001850 Solanum pennellii HOM05D001018 ORTHO05D000626 1.2e-11 73.6 41 78.0
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 2.8e-11 72.4 43 86.0
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 8.1e-11 70.9 106 44.3
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 8.1e-11 70.9 106 44.3
Phvul.003G090100 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 8.1e-11 70.9 104 48.1
Zm00001eb440240 Zea mays HOM05D001018 ORTHO05D000626 8.1e-11 70.9 83 56.6
unitig_579.g34807 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-10 68.6 65 61.5
EL10As19g24175 Beta vulgaris HOM05D001018 ORTHO05D000626 8.9e-10 67.4 128 43.0
EL10As19g24176 Beta vulgaris HOM05D001018 ORTHO05D000626 8.9e-10 67.4 128 43.0
EL10As19g24177 Beta vulgaris HOM05D001018 ORTHO05D000626 8.9e-10 67.4 128 43.0
unitig_579.g34818 Utricularia gibba HOM05D001018 ORTHO05D000626 1.2e-09 67.0 37 91.9
Zm00001eb441190 Zea mays HOM05D001018 ORTHO05D000626 1.2e-09 67.0 79 54.4
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 2.6e-09 65.9 39 87.2
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 7.5e-09 64.3 39 84.6
unitig_678.g33163 Utricularia gibba HOM05D001018 ORTHO05D000626 1.3e-08 63.5 57 66.7
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 2.9e-08 62.4 38 86.8
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 2.9e-08 62.4 38 86.8
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 2.9e-08 62.4 38 86.8
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 6.4e-08 61.2 39 82.1
Oeu051370.1 Olea europaea HOM05D005014 ORTHO05D003704 1.4e-07 60.1 65 52.3
Zm00001eb436930 Zea mays HOM05D010106 ORTHO05D000626 1.4e-07 60.1 73 52.1
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 2.4e-07 59.3 39 79.5
unitig_269.g35314 Utricularia gibba HOM05D001018 ORTHO05D000626 3.2e-07 58.9 62 61.3
A05p21940 Brassica napus HOM05D001018 ORTHO05D000626 5.4e-07 58.2 38 81.6
ScUNg0000620 Simmondsia chinensis HOM05D001018 ORTHO05D000626 9.2e-07 57.4 28 96.4
FAN17G1090 Fragaria x ananassa HOM05D001018 ORTHO05D000626 1.6e-06 56.6 31 90.3
unitig_631.g33700 Utricularia gibba HOM05D001018 ORTHO05D000626 1.6e-06 56.6 76 50.0
CiPaw.15G099800 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.1e-06 56.2 29 93.1
CiPaw.15G106100 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.1e-06 56.2 29 93.1
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 3.5e-06 55.5 35 82.9
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 4.6e-06 55.1 36 77.8
Glyma.13G011200 Glycine max HOM05D001018 ORTHO05D000626 4.6e-06 55.1 28 92.9
unitig_174.g29159 Utricularia gibba HOM05D001018 ORTHO05D000626 4.6e-06 55.1 28 92.9


User provided reference genes

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