Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.7e-177 625.9 333 100.0
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 7.2e-107 391.3 348 63.5
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.9e-99 366.7 347 62.5
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.9e-99 366.7 347 62.5
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 3.2e-99 365.9 342 62.3
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 7.2e-99 364.8 279 73.1
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 4.7e-98 362.1 339 61.9
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.7e-95 353.6 395 55.7
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 9.7e-88 327.8 337 59.1
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 9.7e-88 327.8 345 59.1
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 5.2e-81 305.4 339 57.2
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 2.8e-79 299.7 338 54.4
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 1.8e-78 297.0 266 61.3
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 2.4e-78 296.6 349 55.0
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.1e-78 296.2 266 60.5
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 5.9e-77 292.0 303 56.8
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 7.7e-77 291.6 364 52.7
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.9e-76 289.7 310 55.5
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 6.6e-76 288.5 368 51.6
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 6.6e-76 288.5 317 56.5
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 1.5e-75 287.3 338 52.7
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 2.5e-75 286.6 360 50.8
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 5.5e-75 285.4 336 55.7
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 8.0e-74 281.6 308 55.2
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.0e-73 281.2 352 51.4
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.4e-73 280.8 377 49.3
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.4e-73 280.8 376 49.7
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.8e-73 280.4 337 55.5
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 2.3e-73 280.0 307 55.7
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 4.0e-73 279.3 309 54.0
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 8.9e-73 278.1 274 56.6
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 1.5e-72 277.3 265 57.4
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 5.7e-72 275.4 271 58.7
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 7.5e-72 275.0 272 57.7
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 1.7e-71 273.9 357 50.7
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.7e-71 272.7 324 53.1
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 3.7e-71 272.7 269 56.5
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 4.9e-71 272.3 290 58.3
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 4.9e-71 272.3 348 51.7
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 6.3e-71 271.9 349 51.6
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 8.3e-71 271.6 352 48.3
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 1.4e-70 270.8 349 49.9
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 1.8e-70 270.4 285 55.1
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 4.1e-70 269.2 317 51.7
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 5.9e-69 265.4 312 52.2
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 5.9e-69 265.4 311 51.8
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.0e-68 264.6 356 50.0
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.3e-68 264.2 292 55.1
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 6.6e-68 261.9 353 49.0
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 6.6e-68 261.9 307 50.8
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.1e-67 261.2 349 50.1
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 1.9e-67 260.4 349 48.4
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 5.6e-67 258.8 313 52.4
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 5.6e-67 258.8 269 56.9
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 7.3e-67 258.5 297 53.5
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 9.5e-67 258.1 353 48.4
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 2.1e-66 256.9 354 49.4
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 6.1e-66 255.4 276 56.2
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 1.0e-65 254.6 323 52.3
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 1.0e-65 254.6 309 50.2
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 1.4e-65 254.2 287 51.9
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 1.4e-65 254.2 309 50.2
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 1.2e-64 251.1 348 51.1
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 2.0e-64 250.4 303 52.1
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 2.6e-64 250.0 259 57.9
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.4e-64 249.6 307 53.4
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 4.4e-64 249.2 291 52.2
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.7e-63 247.3 266 54.9
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 2.2e-63 246.9 269 53.5
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 3.7e-63 246.1 358 48.3
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 8.3e-63 245.0 253 56.9
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.4e-62 244.2 125 100.0
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 2.4e-62 243.4 378 45.2
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 4.1e-62 242.7 275 53.5
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 5.4e-62 242.3 306 51.3
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 5.4e-62 242.3 345 49.3
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.0e-60 238.0 307 50.8
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 3.9e-60 236.1 324 50.6
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 2.1e-58 230.3 310 50.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 3.6e-58 229.6 261 55.6
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 4.7e-58 229.2 258 55.0
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 4.7e-58 229.2 318 47.2
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 6.2e-58 228.8 247 55.1
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 8.0e-58 228.4 318 47.2
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 8.0e-58 228.4 248 54.0
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 1.1e-57 228.0 344 46.5
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.4e-57 227.6 265 50.9
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 2.3e-57 226.9 261 54.0
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 7.5e-56 221.9 338 45.9
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 9.8e-56 221.5 339 45.1
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 1.3e-55 221.1 293 48.8
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.7e-55 220.7 226 53.5
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.6e-53 214.2 368 44.3
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.6e-53 212.6 281 47.7
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.6e-53 212.6 256 53.1
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.0e-52 211.5 329 43.2
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.0e-52 211.5 338 45.3
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.1e-51 208.0 231 53.7
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 1.6e-50 204.1 153 68.0
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 4.4e-48 196.1 303 45.5
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 9.2e-46 188.3 172 61.6
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.2e-45 188.0 152 66.4
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 1.4e-30 137.9 286 37.8
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.6e-29 134.4 269 37.5
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 3.9e-28 129.8 303 35.0
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 5.3e-25 119.4 259 37.1
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 4.2e-22 109.8 113 50.4
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 4.6e-21 106.3 135 56.3
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 5.1e-20 102.8 231 38.5
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 9.0e-17 92.0 169 39.6
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 7.6e-16 89.0 46 87.0
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 1.6e-13 81.3 45 80.0
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.9e-11 74.3 57 54.4
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 2.5e-11 73.9 84 48.8
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 6.2e-10 69.3 137 35.8
Psat5g000080 Pisum sativum HOM05D006924 ORTHO05D008218 1.2e-08 65.1 90 50.0
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 1.0e-07 62.0 163 36.8
Cre03.g200431 Chlamydomonas reinhardtii HOM05D006924 ORTHO05D008218 1.1e-06 58.5 199 27.6


User provided reference genes

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