Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 5.5e-104 380.9 190 100.0
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 1.0e-25 120.9 64 93.8
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 2.3e-25 119.8 64 93.8
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 3.0e-25 119.4 64 92.2
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 3.9e-25 119.0 64 92.2
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 6.7e-25 118.2 64 92.2
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 6.7e-25 118.2 64 92.2
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 8.7e-25 117.9 64 92.2
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 8.7e-25 117.9 64 92.2
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 2.5e-24 116.3 64 89.1
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 2.5e-24 116.3 64 92.2
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.5e-24 116.3 64 89.1
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 2.5e-24 116.3 64 89.1
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 3.3e-24 115.9 64 90.6
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 3.3e-24 115.9 64 89.1
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 3.3e-24 115.9 64 89.1
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 5.7e-24 115.2 64 90.6
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 5.7e-24 115.2 64 87.5
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 5.7e-24 115.2 64 90.6
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 5.7e-24 115.2 64 90.6
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 7.4e-24 114.8 64 87.5
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 7.4e-24 114.8 64 85.9
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 7.4e-24 114.8 64 85.9
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 7.4e-24 114.8 64 85.9
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 9.7e-24 114.4 64 85.9
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 9.7e-24 114.4 64 85.9
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 9.7e-24 114.4 64 89.1
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 1.3e-23 114.0 64 87.5
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 1.3e-23 114.0 64 87.5
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 1.3e-23 114.0 64 89.1
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 1.3e-23 114.0 64 87.5
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 1.3e-23 114.0 64 87.5
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 1.6e-23 113.6 64 87.5
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 1.6e-23 113.6 64 87.5
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 1.6e-23 113.6 63 90.5
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 1.6e-23 113.6 64 89.1
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 1.6e-23 113.6 62 91.9
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 2.8e-23 112.8 64 87.5
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 2.8e-23 112.8 64 87.5
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.8e-23 112.8 64 85.9
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 2.8e-23 112.8 64 87.5
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 3.7e-23 112.5 64 85.9
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 3.7e-23 112.5 64 85.9
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 3.7e-23 112.5 64 87.5
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 4.8e-23 112.1 64 87.5
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 4.8e-23 112.1 64 85.9
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 6.3e-23 111.7 64 89.1
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 8.2e-23 111.3 64 84.4
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 8.2e-23 111.3 64 84.4
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 8.2e-23 111.3 64 84.4
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 8.2e-23 111.3 64 87.5
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 8.2e-23 111.3 62 90.3
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 8.2e-23 111.3 64 85.9
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.1e-22 110.9 64 85.9
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.1e-22 110.9 64 85.9
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.1e-22 110.9 64 85.9
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 1.1e-22 110.9 64 85.9
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 1.1e-22 110.9 69 79.7
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 1.4e-22 110.5 63 88.9
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 1.4e-22 110.5 64 84.4
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 2.4e-22 109.8 64 85.9
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 2.4e-22 109.8 64 84.4
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 2.4e-22 109.8 63 88.9
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 6.9e-22 108.2 64 87.5
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.2e-21 107.5 64 81.2
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 1.2e-21 107.5 64 84.4
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.5e-21 107.1 64 84.4
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 1.5e-21 107.1 64 82.8
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 1.5e-21 107.1 64 84.4
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 1.5e-21 107.1 64 82.8
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 2.0e-21 106.7 64 85.9
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 2.0e-21 106.7 64 84.4
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 2.6e-21 106.3 64 79.7
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 2.6e-21 106.3 64 85.9
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 2.6e-21 106.3 64 81.2
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 2.6e-21 106.3 64 85.9
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 4.5e-21 105.5 64 85.9
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 4.5e-21 105.5 64 84.4
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 7.7e-21 104.8 64 84.4
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 7.7e-21 104.8 64 84.4
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 7.7e-21 104.8 64 84.4
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 7.7e-21 104.8 64 84.4
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 7.7e-21 104.8 64 81.2
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 1.3e-20 104.0 64 84.4
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.7e-20 103.6 64 82.8
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 1.7e-20 103.6 62 87.1
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.2e-20 103.2 64 84.4
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 2.9e-20 102.8 64 82.8
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.9e-20 102.8 64 82.8
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.9e-20 102.8 64 82.8
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 3.8e-20 102.4 64 82.8
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 6.5e-20 101.7 64 81.2
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 8.5e-20 101.3 64 81.2
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 1.1e-19 100.9 64 78.1
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 1.9e-19 100.1 64 76.6
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.9e-19 100.1 64 76.6
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 1.9e-19 100.1 64 76.6
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.5e-19 99.8 64 81.2
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 4.2e-19 99.0 62 79.0
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 7.9e-18 94.7 63 81.0
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.3e-17 93.2 64 76.6
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 1.1e-16 90.9 63 71.4
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 1.5e-16 90.5 64 73.4
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 2.0e-16 90.1 64 73.4
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 2.5e-16 89.7 64 75.0
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 5.7e-16 88.6 64 70.3
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 1.3e-15 87.4 64 68.8
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 4.8e-15 85.5 64 70.3
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 7.2e-11 71.6 64 62.5
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 7.9e-10 68.2 66 54.5
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 2.2e-07 60.1 30 90.0
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 1.4e-06 57.4 67 44.8


User provided reference genes

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