Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016684 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.5e-61 238.0 116 100.0
CSS0024207 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.5e-61 238.0 116 100.0
CSS0032900 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.5e-61 238.0 116 100.0
CSS0016202 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 1.0e-60 236.5 116 99.1
CSS0018094 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.0e-60 235.0 116 99.1
CSS0017200 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 5.1e-60 234.2 116 98.3
CSS0016280 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 6.7e-60 233.8 116 99.1
CSS0002700 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 2.5e-46 188.7 116 83.6
Actinidia22894 Actinidia chinensis HOM05D004017 ORTHO05D004612 1.0e-23 113.6 69 81.2
TAR628G0231 Trochodendron aralioides HOM05D004017 ORTHO05D004612 2.9e-23 112.1 65 80.0
vmacro20628 Vaccinium macrocarpon HOM05D004017 ORTHO05D004612 5.0e-23 111.3 64 81.2
Rhsim10G0195200 Rhododendron simsii HOM05D004017 ORTHO05D004612 4.2e-22 108.2 66 81.8
Dinv28321 Davidia involucrata HOM05D004017 ORTHO05D004612 7.2e-22 107.5 64 78.1
GSVIVG01026635001 Vitis vinifera HOM05D004017 ORTHO05D004612 1.2e-21 106.7 91 58.2
Manes.02G114300 Manihot esculenta HOM05D004017 ORTHO05D004612 2.1e-21 105.9 69 69.6
Glyma.01G158400 Glycine max HOM05D004017 ORTHO05D004612 6.1e-21 104.4 69 68.1
CiPaw.07G002300 Carya illinoinensis HOM05D004017 ORTHO05D004612 8.0e-21 104.0 69 72.5
Atru.chr3.129 Acer truncatum HOM05D004017 ORTHO05D004612 1.8e-20 102.8 66 69.7
PGR142G4352 Punica granatum HOM05D004017 ORTHO05D004612 2.3e-20 102.4 80 65.0
Ciclev10024702m.g Citrus clementina HOM05D004017 ORTHO05D004612 1.5e-19 99.8 60 71.7
arahy.Tifrunner.gnm1.ann1.IMTK78 Arachis hypogaea HOM05D004017 ORTHO05D004612 2.6e-19 99.0 69 63.8
Lj2A500T36 Lonicera japonica HOM05D004017 ORTHO05D004612 4.4e-19 98.2 67 74.6
QL06p053019 Quercus lobata HOM05D004017 ORTHO05D004612 4.4e-19 98.2 59 76.3
Ca_24985_v3 Cicer arietinum L. HOM05D004017 ORTHO05D004612 5.7e-19 97.8 64 70.3
ECA238G2486 Erigeron canadensis HOM05D004017 ORTHO05D004612 7.5e-19 97.4 63 68.3
Lalb_Chr16g0380061 Lupinus albus HOM05D004017 ORTHO05D004612 7.5e-19 97.4 66 66.7
Duzib147G1448 Durio zibethinus HOM05D004017 ORTHO05D004612 9.7e-19 97.1 101 50.5
Lj2g0020546 Lotus japonicus HOM05D004017 ORTHO05D004612 9.7e-19 97.1 69 66.7
Phvul.002G116900 Phaseolus vulgaris HOM05D004017 ORTHO05D004612 9.7e-19 97.1 87 56.3
Psat2g148040 Pisum sativum HOM05D004017 ORTHO05D004612 9.7e-19 97.1 86 57.0
HanXRQChr14g0442551 Helianthus annuus HOM05D004017 ORTHO05D004612 2.2e-18 95.9 61 73.8
PSO541G0703 Papaver somniferum HOM05D004017 ORTHO05D004612 3.7e-18 95.1 65 67.7
Sabra05G0084300 Salix brachista HOM05D004017 ORTHO05D004612 3.7e-18 95.1 60 73.3
CANSAT25G1082 Cannabis sativa HOM05D004017 ORTHO05D004612 4.8e-18 94.7 71 64.8
Nn6g31689 Nelumbo nucifera HOM05D004017 ORTHO05D004612 4.8e-18 94.7 64 68.8
Medtr5g024250 Medicago truncatula HOM05D004017 ORTHO05D004612 6.3e-18 94.4 86 55.8
CAN.G1238.14 Capsicum annuum HOM05D004017 ORTHO05D004612 1.4e-17 93.2 60 73.3
Prupe.7G183500 Prunus persica HOM05D004017 ORTHO05D004612 1.4e-17 93.2 69 60.9
Potri.005G101900 Populus trichocarpa HOM05D004017 ORTHO05D004612 2.4e-17 92.4 60 71.7
Lsat_1_v5_gn_2_73681 Lactuca sativa HOM05D004017 ORTHO05D004612 3.1e-17 92.0 59 76.3
Thecc.01G005000 Theobroma cacao HOM05D004017 ORTHO05D004612 4.1e-17 91.7 63 73.0
TPR.G33889 Trifolium pratense HOM05D004017 ORTHO05D004612 4.1e-17 91.7 87 56.3
Eucgr.J02538 Eucalyptus grandis HOM05D004017 ORTHO05D004612 5.3e-17 91.3 56 71.4
Cpa.g.sc6.367 Carica papaya HOM05D004017 ORTHO05D004612 7.0e-17 90.9 57 75.4
Nitab4.5_0004608g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 7.0e-17 90.9 65 67.7
Peaxi162Scf00121g02447 Petunia axillaris HOM05D004017 ORTHO05D004612 7.0e-17 90.9 65 67.7
FAN26G0543 Fragaria x ananassa HOM05D004017 ORTHO05D004612 9.1e-17 90.5 62 66.1
Gohir.A02G178100 Gossypium hirsutum HOM05D004017 ORTHO05D004612 9.1e-17 90.5 66 66.7
Oeu045735.2 Olea europaea HOM05D004017 ORTHO05D004612 9.1e-17 90.5 65 67.7
AL7G15650 Arabidopsis lyrata HOM05D004017 ORTHO05D004612 1.6e-16 89.7 66 65.2
Cc07_g11910 Coffea canephora HOM05D004017 ORTHO05D004612 1.6e-16 89.7 57 73.7
FvH4_1g10270 Fragaria vesca HOM05D004017 ORTHO05D004612 1.6e-16 89.7 62 66.1
DCAR_016694 Daucus carota HOM05D004017 ORTHO05D004612 2.0e-16 89.4 62 71.0
CsaV3_3G000200 Cucumis sativus L. HOM05D004017 ORTHO05D004612 2.7e-16 89.0 91 52.7
Gorai.003G002000 Gossypium raimondii HOM05D004017 ORTHO05D004612 2.7e-16 89.0 66 65.2
Hma1.2p1_0300F.1_g117960 Hydrangea macrophylla HOM05D004017 ORTHO05D004612 2.7e-16 89.0 70 64.3
RcHm_v2.0_Chr2g0097091 Rosa chinensis HOM05D004017 ORTHO05D004612 3.5e-16 88.6 69 56.5
FAN23G1226 Fragaria x ananassa HOM05D004017 ORTHO05D004612 4.5e-16 88.2 62 64.5
FAN28G2227 Fragaria x ananassa HOM05D004017 ORTHO05D004612 4.5e-16 88.2 62 64.5
Lsat_1_v5_gn_5_57160 Lactuca sativa HOM05D004017 ORTHO05D004612 4.5e-16 88.2 66 66.7
Aqoxy6G01621 Aquilegia oxysepala HOM05D004017 ORTHO05D004612 5.9e-16 87.8 64 65.6
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 7.7e-16 87.4 66 65.2
FAN19G1215 Fragaria x ananassa HOM05D004017 ORTHO05D004612 1.0e-15 87.0 62 64.5
Hund03598 Selenicereus undatus HOM05D004017 ORTHO05D004612 1.0e-15 87.0 65 63.1
Nitab4.5_0001467g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 1.3e-15 86.7 66 65.2
Solyc02g082660.3 Solanum lycopersicum HOM05D004017 ORTHO05D004612 1.7e-15 86.3 57 71.9
A03p63640 Brassica napus HOM05D004017 ORTHO05D004612 2.2e-15 85.9 62 67.7
BraA03t15435Z Brassica rapa HOM05D004017 ORTHO05D004612 2.2e-15 85.9 62 67.7
MD02G1114700 Malus domestica HOM05D004017 ORTHO05D004612 2.2e-15 85.9 57 66.7
Sopen02g027400 Solanum pennellii HOM05D004017 ORTHO05D004612 2.2e-15 85.9 69 60.9
AT4G35520 Arabidopsis thaliana HOM05D004017 ORTHO05D004612 2.9e-15 85.5 62 66.1
C07p61210 Brassica napus HOM05D004017 ORTHO05D004612 2.9e-15 85.5 62 66.1
BolC7t46547H Brassica oleracea HOM05D004017 ORTHO05D004612 2.9e-15 85.5 62 66.1
Thhalv10024245m.g Eutrema salsugineum HOM05D004017 ORTHO05D004612 3.8e-15 85.1 62 66.1
Sp7g33300 Schrenkiella parvula HOM05D004017 ORTHO05D004612 3.8e-15 85.1 62 66.1
Carub.0007s0480 Capsella rubella HOM05D004017 ORTHO05D004612 5.0e-15 84.7 62 64.5
TWI09G1144 Tripterygium wilfordii HOM05D004017 ORTHO05D004612 5.0e-15 84.7 61 62.3
AUR62003744 Chenopodium quinoa HOM05D004017 ORTHO05D004612 6.5e-15 84.3 65 63.1
ATR0807G175 Amborella trichopoda HOM05D004017 ORTHO05D004612 8.5e-15 84.0 76 55.3
Sed0025898 Sechium edule HOM05D004017 ORTHO05D004612 8.5e-15 84.0 66 65.2
THA.LOC104819715 Tarenaya hassleriana HOM05D004017 ORTHO05D004612 8.5e-15 84.0 62 66.1
CARHR243850 Cardamine hirsuta HOM05D004017 ORTHO05D004612 1.1e-14 83.6 62 64.5
MELO3C013715.2 Cucumis melo HOM05D004017 ORTHO05D004612 1.1e-14 83.6 91 49.5
SGA_v2.0_scaffold61G21182 Striga asiatica HOM05D004017 ORTHO05D004612 7.2e-14 80.9 65 60.0
Sopen01g052810 Solanum pennellii HOM05D004017 ORTHO05D004612 1.2e-13 80.1 88 52.3
COL.COLO4_22554 Corchorus olitorius HOM05D004017 ORTHO05D004612 3.6e-13 78.6 50 76.0
HPP92_020507 Vanilla planifolia HOM05D004017 ORTHO05D004612 6.1e-13 77.8 62 62.9
AUR62002051 Chenopodium quinoa HOM05D004017 ORTHO05D004612 1.0e-12 77.0 65 60.0
Solyc01g110640.2 Solanum lycopersicum HOM05D004017 ORTHO05D013629 1.0e-12 77.0 69 56.5
arahy.Tifrunner.gnm1.ann1.0EHY87 Arachis hypogaea HOM05D004017 ORTHO05D004612 1.8e-12 76.3 72 54.2
Aa31LG6G12480 Aethionema arabicum HOM05D004017 ORTHO05D004612 2.3e-12 75.9 62 59.7
Sc03g0003980 Simmondsia chinensis HOM05D004017 ORTHO05D004612 3.0e-12 75.5 64 57.8
SHI29523 Sapria himalayana HOM05D004017 ORTHO05D004612 1.5e-11 73.2 53 64.2
Zm00001eb104330 Zea mays HOM05D004017 ORTHO05D004612 4.4e-11 71.6 74 43.2
Zm00001eb104360 Zea mays HOM05D004017 ORTHO05D004612 4.4e-11 71.6 74 43.2
MD15G1230600 Malus domestica HOM05D004017 ORTHO05D004612 1.7e-10 69.7 50 64.0
Ah.03g142840 Amaranthus hybridus HOM05D004017 ORTHO05D004612 2.2e-10 69.3 65 49.2
Os09g0551900 Oryza sativa ssp. japonica HOM05D004017 ORTHO05D004612 2.2e-10 69.3 57 52.6
CDE06G0086 Ceratophyllum demersum HOM05D004017 ORTHO05D004612 2.8e-10 68.9 57 57.9
Migut.L00849 Erythranthe guttata HOM05D004017 ORTHO05D004612 1.4e-09 66.6 65 55.4
Migut.L00851 Erythranthe guttata HOM05D004017 ORTHO05D004612 1.4e-09 66.6 60 60.0
Sopen02g027370 Solanum pennellii HOM05D004017 ORTHO05D004612 4.1e-09 65.1 50 62.0
Mapoly0006s0222 Marchantia polymorpha HOM05D004017 ORTHO05D004612 5.4e-09 64.7 56 60.7
unitig_747.g21784 Utricularia gibba HOM05D004017 ORTHO05D004612 3.5e-08 62.0 70 48.6
Sopen02g033710 Solanum pennellii HOM05D004017 ORTHO05D004612 7.7e-08 60.8 53 50.9
Zm00001eb104340 Zea mays HOM05D004017 ORTHO05D004612 8.6e-07 57.4 69 39.1


User provided reference genes

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