Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023611 Camellia sinensis var. sinensis HOM05D000467 ORTHO05D111066 2.8e-34 147.9 68 100.0
Gohir.D08G243400 Gossypium hirsutum HOM05D000467 ORTHO05D000379 3.8e-07 57.8 59 55.9
Gorai.004G259300 Gossypium raimondii HOM05D000467 ORTHO05D000379 3.8e-07 57.8 59 55.9
COL.COLO4_06381 Corchorus olitorius HOM05D000467 ORTHO05D000379 5.0e-07 57.4 59 55.9
Thecc.05G208600 Theobroma cacao HOM05D000467 ORTHO05D000379 5.0e-07 57.4 59 55.9
Atru.chr12.1983 Acer truncatum HOM05D000467 ORTHO05D000379 1.1e-06 56.2 46 63.0
Nn1g01974 Nelumbo nucifera HOM05D000467 ORTHO05D000379 1.1e-06 56.2 46 63.0
Nn3g19292 Nelumbo nucifera HOM05D000467 ORTHO05D000379 1.1e-06 56.2 46 63.0
Nn3g19293 Nelumbo nucifera HOM05D000467 ORTHO05D000379 1.1e-06 56.2 46 63.0
Potri.013G081300 Populus trichocarpa HOM05D000467 ORTHO05D000379 1.1e-06 56.2 46 63.0
Sabra13G0071700 Salix brachista HOM05D000467 ORTHO05D000379 1.1e-06 56.2 46 63.0
Gohir.A08G223200 Gossypium hirsutum HOM05D000467 ORTHO05D000379 1.5e-06 55.8 59 54.2
unitig_0.g2214 Utricularia gibba HOM05D000467 ORTHO05D000379 1.5e-06 55.8 46 63.0
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 1.5e-06 55.8 46 63.0
Duzib106G0790 Durio zibethinus HOM05D000467 ORTHO05D000379 1.9e-06 55.5 48 58.3
FAN03G1070 Fragaria x ananassa HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 60.9
FAN03G2783 Fragaria x ananassa HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 60.9
FAN10G0920 Fragaria x ananassa HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 60.9
FAN10G2077 Fragaria x ananassa HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 60.9
Manes.09G124300 Manihot esculenta HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 63.0
Prupe.2G324300 Prunus persica HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 60.9
RcHm_v2.0_Chr1g0383911 Rosa chinensis HOM05D000467 ORTHO05D000379 1.9e-06 55.5 46 60.9
Dinv15834 Davidia involucrata HOM05D000467 ORTHO05D000379 2.5e-06 55.1 46 60.9
CSS0044438 Camellia sinensis var. sinensis HOM05D000467 ORTHO05D000379 3.3e-06 54.7 46 58.7
CDE02G1927 Ceratophyllum demersum HOM05D000467 ORTHO05D000379 3.3e-06 54.7 46 60.9
CDE11G0037 Ceratophyllum demersum HOM05D000467 ORTHO05D000379 3.3e-06 54.7 46 60.9
Migut.A00578 Erythranthe guttata HOM05D000467 ORTHO05D000379 3.3e-06 54.7 46 60.9
Oeu044980.1 Olea europaea HOM05D000467 ORTHO05D000379 3.3e-06 54.7 46 58.7
SGA_v2.0_scaffold111G31376 Striga asiatica HOM05D000467 ORTHO05D000379 3.3e-06 54.7 46 60.9
Actinidia14760 Actinidia chinensis HOM05D000467 ORTHO05D000379 4.2e-06 54.3 46 60.9
Dinv29040 Davidia involucrata HOM05D000467 ORTHO05D000379 4.2e-06 54.3 46 60.9
Migut.E01334 Erythranthe guttata HOM05D000467 ORTHO05D000379 4.2e-06 54.3 46 60.9
PGR142G2654 Punica granatum HOM05D000467 ORTHO05D000379 4.2e-06 54.3 46 60.9
Rhsim11G0027400 Rhododendron simsii HOM05D000467 ORTHO05D000379 4.2e-06 54.3 46 58.7
SalBow4G1833 Salvia bowleyana HOM05D000467 ORTHO05D000379 4.2e-06 54.3 46 60.9
Ciclev10018590m.g Citrus clementina HOM05D000467 ORTHO05D000379 5.5e-06 53.9 46 60.9
MSTRG.11894 Avicennia marina HOM05D000467 ORTHO05D000379 7.2e-06 53.5 46 60.9
FvH4_7g33770 Fragaria vesca HOM05D000467 ORTHO05D000379 7.2e-06 53.5 46 58.7
FAN01G0799 Fragaria x ananassa HOM05D000467 ORTHO05D000379 7.2e-06 53.5 46 58.7
MD01G1234100 Malus domestica HOM05D000467 ORTHO05D000379 7.2e-06 53.5 46 58.7
MD07G1306300 Malus domestica HOM05D000467 ORTHO05D000379 7.2e-06 53.5 46 58.7
MSTRG.1784 Avicennia marina HOM05D000467 ORTHO05D000379 9.5e-06 53.1 46 58.7
Solyc08g076030.3 Solanum lycopersicum HOM05D000467 ORTHO05D000379 9.5e-06 53.1 46 58.7
Sopen08g024680 Solanum pennellii HOM05D000467 ORTHO05D000379 9.5e-06 53.1 46 58.7
GSVIVG01024440001 Vitis vinifera HOM05D000467 ORTHO05D000379 9.5e-06 53.1 46 58.7


User provided reference genes

Program Settings