Gene: Sopen08g024680
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g024680
- Transcript Identifier Sopen08g024680.2
- Gene Type Coding gene
- Location Spenn-ch08 : 64447102-64460463 : negative
Gene Family Information
- ID HOM05D000467
- #Genes/#Species 1130/96
- Phylogenetic origin
- ID ORTHO05D000379
- #Genes/#Species 1028/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g024680.2
Descriptions
- Description Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. | TOPLESS (TPL) | FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: TOPLESS-related 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010229 | ISO | PLAZA Integrative Orthology | inflorescence development | Os08g0162100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |