Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023608 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 3.1e-78 295.0 148 100.0
CSS0029491 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 2.7e-66 255.4 135 95.6
Actinidia12812 Actinidia chinensis HOM05D004367 ORTHO05D004937 3.6e-34 148.7 126 63.5
Actinidia09681 Actinidia chinensis HOM05D004367 ORTHO05D004937 7.5e-32 141.0 125 61.6
TAR624G0790 Trochodendron aralioides HOM05D004367 ORTHO05D004937 7.5e-32 141.0 107 65.4
CSS0040030 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 9.8e-32 140.6 108 66.7
Dinv04310 Davidia involucrata HOM05D004367 ORTHO05D004937 1.7e-31 139.8 120 63.3
CSS0040505 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.1e-30 137.1 108 65.7
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 4.1e-30 135.2 107 65.4
Hma1.2p1_0480F.1_g161810 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 4.1e-30 135.2 107 65.4
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 4.1e-30 135.2 118 60.2
vmacro11860 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 1.6e-29 133.3 113 62.8
vmacro22868 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 1.6e-29 133.3 113 62.8
Ciclev10008024m.g Citrus clementina HOM05D004367 ORTHO05D004937 2.0e-29 132.9 113 61.1
GSVIVG01014349001 Vitis vinifera HOM05D004367 ORTHO05D004937 4.6e-29 131.7 119 58.8
QL08p021548 Quercus lobata HOM05D004367 ORTHO05D004937 7.8e-29 131.0 108 63.0
Sabra16G0262900 Salix brachista HOM05D004367 ORTHO05D004937 1.0e-28 130.6 118 61.0
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 1.7e-28 129.8 106 65.1
TWI39G0928 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 2.3e-28 129.4 118 56.8
Nitab4.5_0000207g0150 Nicotiana tabacum HOM05D004367 ORTHO05D004937 3.0e-28 129.0 107 64.5
Rhsim06G0197900 Rhododendron simsii HOM05D004367 ORTHO05D004937 5.0e-28 128.3 108 61.1
Sopen10g002900 Solanum pennellii HOM05D004367 ORTHO05D004937 6.6e-28 127.9 122 59.0
AUR62029381 Chenopodium quinoa HOM05D004367 ORTHO05D004937 1.1e-27 127.1 120 55.8
Lj1A844G36 Lonicera japonica HOM05D004367 ORTHO05D004937 1.1e-27 127.1 101 61.4
Cc00_g35090 Coffea canephora HOM05D004367 ORTHO05D004937 1.5e-27 126.7 116 58.6
Nn1g06556 Nelumbo nucifera HOM05D004367 ORTHO05D004937 1.5e-27 126.7 125 53.6
PGSC0003DMG400025036 Solanum tuberosum HOM05D004367 ORTHO05D004937 1.5e-27 126.7 120 60.0
Cpa.g.sc80.55 Carica papaya HOM05D004367 ORTHO05D004937 2.5e-27 125.9 118 57.6
CiPaw.11G168700 Carya illinoinensis HOM05D004367 ORTHO05D004937 2.5e-27 125.9 127 54.3
Oeu060551.2 Olea europaea HOM05D004367 ORTHO05D004937 2.5e-27 125.9 134 53.7
MSTRG.15226 Avicennia marina HOM05D004367 ORTHO05D004937 4.3e-27 125.2 115 56.5
Oeu005412.1 Olea europaea HOM05D004367 ORTHO05D004937 9.5e-27 124.0 126 54.8
Solyc10g006990.3 Solanum lycopersicum HOM05D004367 ORTHO05D004937 1.2e-26 123.6 120 58.3
AUR62034287 Chenopodium quinoa HOM05D004367 ORTHO05D004937 2.1e-26 122.9 120 55.0
SalBow8G0254 Salvia bowleyana HOM05D004367 ORTHO05D004937 2.1e-26 122.9 115 57.4
COL.COLO4_09395 Corchorus olitorius HOM05D004367 ORTHO05D004937 2.8e-26 122.5 107 59.8
Nitab4.5_0002383g0110 Nicotiana tabacum HOM05D004367 ORTHO05D004937 4.7e-26 121.7 102 62.7
Cfa020594 Carpinus fangiana HOM05D004367 ORTHO05D004937 6.2e-26 121.3 123 60.2
Potri.001G400800 Populus trichocarpa HOM05D004367 ORTHO05D004937 6.2e-26 121.3 106 62.3
Hund22921 Selenicereus undatus HOM05D004367 ORTHO05D004937 1.4e-25 120.2 120 54.2
QL05p086109 Quercus lobata HOM05D004367 ORTHO05D004937 1.8e-25 119.8 102 60.8
Thecc.07G087300 Theobroma cacao HOM05D004367 ORTHO05D004937 4.0e-25 118.6 92 63.0
Aqoxy4G00819 Aquilegia oxysepala HOM05D004367 ORTHO05D004937 8.9e-25 117.5 120 49.2
DCAR_017144 Daucus carota HOM05D004367 ORTHO05D004937 8.9e-25 117.5 126 55.6
Sed0004687 Sechium edule HOM05D004367 ORTHO05D004937 8.9e-25 117.5 114 57.9
Duzib213G0391 Durio zibethinus HOM05D004367 ORTHO05D004937 1.2e-24 117.1 118 55.1
Ca_01836_v3 Cicer arietinum L. HOM05D004367 ORTHO05D004937 1.5e-24 116.7 105 60.0
Gohir.A01G064120 Gossypium hirsutum HOM05D004367 ORTHO05D004937 1.5e-24 116.7 133 51.1
Phvul.005G070800 Phaseolus vulgaris HOM05D004367 ORTHO05D004937 1.5e-24 116.7 119 52.9
Sc16g0006960 Simmondsia chinensis HOM05D004367 ORTHO05D004937 2.0e-24 116.3 115 53.9
Atru.chr2.2651 Acer truncatum HOM05D004367 ORTHO05D004937 3.4e-24 115.5 107 57.0
Atru.chr2.2673 Acer truncatum HOM05D004367 ORTHO05D004937 3.4e-24 115.5 107 57.0
HanXRQChr12g0361521 Helianthus annuus HOM05D004367 ORTHO05D004937 3.4e-24 115.5 119 47.9
Ah.06g184060 Amaranthus hybridus HOM05D004367 ORTHO05D004937 5.8e-24 114.8 102 54.9
ClCG11G018120 Citrullus lanatus HOM05D004367 ORTHO05D004937 5.8e-24 114.8 102 59.8
Psat5g242760 Pisum sativum HOM05D004367 ORTHO05D004937 7.5e-24 114.4 114 54.4
CsaV3_4G033760 Cucumis sativus L. HOM05D004367 ORTHO05D004937 9.8e-24 114.0 108 58.3
TPR.G38993 Trifolium pratense HOM05D004367 ORTHO05D004937 9.8e-24 114.0 106 56.6
Medtr2g079330 Medicago truncatula HOM05D004367 ORTHO05D004937 2.9e-23 112.5 98 61.2
PGR083G2352 Punica granatum HOM05D004367 ORTHO05D004937 3.7e-23 112.1 129 47.3
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea HOM05D004367 ORTHO05D004937 4.9e-23 111.7 107 55.1
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea HOM05D004367 ORTHO05D004937 4.9e-23 111.7 107 55.1
Glyma.13G277700 Glycine max HOM05D004367 ORTHO05D004937 6.4e-23 111.3 102 57.8
Lalb_Chr25g0286441 Lupinus albus HOM05D004367 ORTHO05D004937 8.3e-23 110.9 87 62.1
EL10Ac4g08166 Beta vulgaris HOM05D004367 ORTHO05D004937 1.1e-22 110.5 95 60.0
TWI38G0759 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 1.4e-22 110.2 93 59.1
Manes.03G110700 Manihot esculenta HOM05D004367 ORTHO05D004937 4.1e-22 108.6 85 61.2
Gohir.D01G051200 Gossypium hirsutum HOM05D004367 ORTHO05D004937 7.0e-22 107.8 91 58.2
Gorai.002G071000 Gossypium raimondii HOM05D004367 ORTHO05D004937 7.0e-22 107.8 91 58.2
Lj3g0015758 Lotus japonicus HOM05D004367 ORTHO05D004937 7.0e-22 107.8 112 52.7
MELO3C016705.2 Cucumis melo HOM05D004367 ORTHO05D004937 1.2e-21 107.1 107 56.1
Lsat_1_v5_gn_5_127821 Lactuca sativa HOM05D004367 ORTHO05D004937 2.7e-21 105.9 96 51.0
unitig_899.g15291 Utricularia gibba HOM05D004367 ORTHO05D004937 3.5e-21 105.5 129 45.7
ECA234G0664 Erigeron canadensis HOM05D004367 ORTHO05D004937 4.6e-21 105.1 107 49.5
Eucgr.F01119 Eucalyptus grandis HOM05D004367 ORTHO05D004937 7.8e-21 104.4 118 47.5
MBI07_g32654_MAGBIO Magnolia biondii HOM05D004367 ORTHO05D004937 7.8e-21 104.4 110 52.7
MD03G1226500 Malus domestica HOM05D004367 ORTHO05D004937 7.8e-21 104.4 124 52.4
MD11G1244600 Malus domestica HOM05D004367 ORTHO05D004937 7.8e-21 104.4 121 54.5
PSO210G1788 Papaver somniferum HOM05D004367 ORTHO05D004937 1.0e-20 104.0 113 50.4
THA.LOC104799923 Tarenaya hassleriana HOM05D004367 ORTHO05D004937 1.3e-20 103.6 92 55.4
BcaB05g22072 Brassica carinata HOM05D004367 ORTHO05D004937 6.6e-20 101.3 120 50.0
C02p17970 Brassica napus HOM05D004367 ORTHO05D004937 8.6e-20 100.9 111 51.4
Prupe.4G182900 Prunus persica HOM05D004367 ORTHO05D004937 1.1e-19 100.5 121 52.9
CARHR266920 Cardamine hirsuta HOM05D004367 ORTHO05D004937 1.5e-19 100.1 109 51.4
SGA_v2.0_scaffold73G24268 Striga asiatica HOM05D004367 ORTHO05D004937 2.5e-19 99.4 119 47.1
BcaC03g14387 Brassica carinata HOM05D004367 ORTHO05D004937 4.3e-19 98.6 111 50.5
BcaB08g35738 Brassica carinata HOM05D004367 ORTHO05D004937 5.6e-19 98.2 100 54.0
BcaC04g20419 Brassica carinata HOM05D004367 ORTHO05D004937 7.3e-19 97.8 100 53.0
A10p11150 Brassica napus HOM05D004367 ORTHO05D004937 7.3e-19 97.8 100 53.0
C09p43730 Brassica napus HOM05D004367 ORTHO05D004937 7.3e-19 97.8 100 53.0
BolC9t57258H Brassica oleracea HOM05D004367 ORTHO05D004937 7.3e-19 97.8 100 53.0
BraA10t43208Z Brassica rapa HOM05D004367 ORTHO05D004937 7.3e-19 97.8 100 53.0
Migut.M00812 Erythranthe guttata HOM05D004367 ORTHO05D004937 7.3e-19 97.8 81 60.5
Thhalv10013073m.g Eutrema salsugineum HOM05D004367 ORTHO05D004937 7.3e-19 97.8 134 43.3
AT5G53770 Arabidopsis thaliana HOM05D004367 ORTHO05D004937 9.5e-19 97.4 110 52.7
VMungo1080G1289 Vigna mungo HOM05D004367 ORTHO05D004937 9.5e-19 97.4 101 50.5
RcHm_v2.0_Chr5g0034001 Rosa chinensis HOM05D004367 ORTHO05D004937 1.2e-18 97.1 113 50.4
FAN25G3266 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.6e-18 96.7 113 52.2
Aa31LG3G10140 Aethionema arabicum HOM05D004367 ORTHO05D004937 2.1e-18 96.3 84 56.0
FvH4_3g20190 Fragaria vesca HOM05D004367 ORTHO05D004937 4.7e-18 95.1 113 51.3
AL8G28710 Arabidopsis lyrata HOM05D004367 ORTHO05D004937 6.2e-18 94.7 112 49.1
FAN16G0302 Fragaria x ananassa HOM05D004367 ORTHO05D004937 6.2e-18 94.7 113 52.2
Sp6g15840 Schrenkiella parvula HOM05D004367 ORTHO05D004937 6.2e-18 94.7 100 53.0
Carub.0008s1407 Capsella rubella HOM05D004367 ORTHO05D004937 1.8e-17 93.2 90 51.1
HPP92_007964 Vanilla planifolia HOM05D004367 ORTHO05D004937 4.0e-17 92.0 112 45.5
HPP92_008014 Vanilla planifolia HOM05D004367 ORTHO05D004937 5.8e-16 88.2 114 46.5
CDE10G0244 Ceratophyllum demersum HOM05D004367 ORTHO05D004937 1.7e-15 86.7 108 49.1
Zm00001eb157140 Zea mays HOM05D004367 ORTHO05D004937 1.7e-12 76.6 107 41.1
ATR0730G126 Amborella trichopoda HOM05D004367 ORTHO05D004937 2.4e-09 66.2 131 35.9
FAN21G3330 Fragaria x ananassa HOM05D004367 ORTHO05D004937 3.1e-09 65.9 56 62.5
SGA_v2.0_scaffold34G13821 Striga asiatica HOM05D004367 ORTHO05D004937 1.5e-08 63.5 128 35.9


User provided reference genes

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