Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023507 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D002520 2.7e-126 455.3 225 100.0
Actinidia37418 Actinidia chinensis HOM05D000225 ORTHO05D002520 2.2e-75 286.2 224 67.0
Dinv24806 Davidia involucrata HOM05D000225 ORTHO05D002520 7.3e-63 244.6 197 61.9
Sopen06g026910 Solanum pennellii HOM05D000225 ORTHO05D002520 3.8e-59 232.3 214 53.7
Solyc06g069610.1 Solanum lycopersicum HOM05D000225 ORTHO05D002520 2.4e-58 229.6 214 52.8
Lj6A811T76 Lonicera japonica HOM05D000225 ORTHO05D002520 1.7e-56 223.4 187 58.8
Cc11_g15550 Coffea canephora HOM05D000225 ORTHO05D002520 3.9e-56 222.2 210 55.2
Rhsim12G0112300 Rhododendron simsii HOM05D000225 ORTHO05D002520 3.9e-56 222.2 209 56.5
Ciclev10033617m.g Citrus clementina HOM05D000225 ORTHO05D002520 1.1e-55 220.7 206 57.3
CAN.G587.20 Capsicum annuum HOM05D000225 ORTHO05D002520 1.4e-53 213.8 206 50.5
TAR371G0870 Trochodendron aralioides HOM05D000225 ORTHO05D002520 2.0e-52 209.9 223 51.6
Hma1.2p1_0223F.1_g094140 Hydrangea macrophylla HOM05D000225 ORTHO05D002520 2.6e-52 209.5 223 52.5
PGSC0003DMG400037297 Solanum tuberosum HOM05D000225 ORTHO05D002520 5.8e-52 208.4 209 50.7
Haze_12234 Corylus avellana HOM05D000225 ORTHO05D002520 1.4e-50 203.8 217 52.5
Cpa.g.sc33.2 Carica papaya HOM05D000225 ORTHO05D002520 1.9e-50 203.4 220 52.3
Peaxi162Scf00013g00053 Petunia axillaris HOM05D000225 ORTHO05D002520 5.5e-50 201.8 197 51.8
GSVIVG01004091001 Vitis vinifera HOM05D000225 ORTHO05D002520 9.3e-50 201.1 227 49.3
Atru.chr9.2548 Acer truncatum HOM05D000225 ORTHO05D002520 3.5e-49 199.1 211 48.3
Atru.chr11.2135 Acer truncatum HOM05D000225 ORTHO05D002520 1.0e-48 197.6 182 52.7
Atru.chr11.2119 Acer truncatum HOM05D000225 ORTHO05D002520 1.3e-48 197.2 182 52.2
CANSAT01G1082 Cannabis sativa HOM05D000225 ORTHO05D002520 5.1e-48 195.3 222 47.3
TWI39G0501 Tripterygium wilfordii HOM05D000225 ORTHO05D002520 6.7e-48 194.9 218 48.2
DCAR_005851 Daucus carota HOM05D000225 ORTHO05D002520 1.1e-47 194.1 204 49.5
Manes.06G108500 Manihot esculenta HOM05D000225 ORTHO05D002520 2.5e-47 193.0 211 47.4
Lsat_1_v5_gn_3_28821 Lactuca sativa HOM05D000225 ORTHO05D002520 5.6e-47 191.8 186 50.5
DCAR_026528 Daucus carota HOM05D000740 ORTHO05D003236 1.6e-46 190.3 223 48.4
Prupe.1G247900 Prunus persica HOM05D000225 ORTHO05D002520 1.6e-46 190.3 214 49.1
CAN.G298.29 Capsicum annuum HOM05D000225 ORTHO05D002520 2.1e-46 189.9 213 49.3
Oeu059915.1 Olea europaea HOM05D000225 ORTHO05D002520 3.7e-46 189.1 200 47.5
MD16G1098600 Malus domestica HOM05D000225 ORTHO05D002520 6.2e-46 188.3 222 48.2
HanXRQChr06g0174451 Helianthus annuus HOM05D000225 ORTHO05D002520 1.1e-45 187.6 209 44.5
Migut.L01480 Erythranthe guttata HOM05D000225 ORTHO05D002520 9.0e-45 184.5 208 45.2
Thecc.02G257100 Theobroma cacao HOM05D000225 ORTHO05D002520 3.4e-44 182.6 213 46.9
Manes.12G024400 Manihot esculenta HOM05D000225 ORTHO05D002520 5.8e-44 181.8 215 47.4
Manes.13G026000 Manihot esculenta HOM05D000225 ORTHO05D002520 1.0e-43 181.0 211 46.9
COL.COLO4_30151 Corchorus olitorius HOM05D000225 ORTHO05D002520 4.9e-43 178.7 190 48.4
Potri.015G081601 Populus trichocarpa HOM05D000225 ORTHO05D002520 4.9e-43 178.7 211 45.0
Potri.T125208 Populus trichocarpa HOM05D000225 ORTHO05D002520 4.9e-43 178.7 211 45.0
Thecc.03G022500 Theobroma cacao HOM05D000225 ORTHO05D002520 8.4e-43 177.9 210 47.1
Glyma.08G283300 Glycine max HOM05D000225 ORTHO05D002520 1.4e-42 177.2 213 46.5
Lj4g0021993 Lotus japonicus HOM05D000225 ORTHO05D002520 2.5e-42 176.4 212 48.1
Nitab4.5_0006673g0100 Nicotiana tabacum HOM05D000225 ORTHO05D002520 2.5e-42 176.4 206 46.6
Eucgr.H02518 Eucalyptus grandis HOM05D000225 ORTHO05D002520 1.2e-41 174.1 215 46.0
VMungo0251G0993 Vigna mungo HOM05D000225 ORTHO05D002520 1.2e-41 174.1 211 45.5
MD06G1169200 Malus domestica HOM05D000225 ORTHO05D002520 1.6e-41 173.7 214 47.7
Duzib251G0491 Durio zibethinus HOM05D000225 ORTHO05D002520 6.0e-41 171.8 212 46.2
Prupe.5G168000 Prunus persica HOM05D000225 ORTHO05D002520 7.9e-41 171.4 223 46.6
FAN22G2293 Fragaria x ananassa HOM05D000225 ORTHO05D002520 1.8e-40 170.2 222 44.6
Gohir.D02G159800 Gossypium hirsutum HOM05D000225 ORTHO05D002520 1.8e-40 170.2 212 46.2
FAN17G1047 Fragaria x ananassa HOM05D000740 ORTHO05D002520 5.1e-40 168.7 222 44.1
Gorai.005G179900 Gossypium raimondii HOM05D000225 ORTHO05D002520 5.1e-40 168.7 212 45.8
FAN07G0546 Fragaria x ananassa HOM05D000740 ORTHO05D002520 6.7e-40 168.3 216 44.4
FAN07G1090 Fragaria x ananassa HOM05D000740 ORTHO05D002520 6.7e-40 168.3 216 44.4
Glyma.01G027100 Glycine max HOM05D000225 ORTHO05D002520 1.5e-39 167.2 228 45.2
Gohir.A03G136600 Gossypium hirsutum HOM05D000225 ORTHO05D002520 1.5e-39 167.2 212 46.2
MBI16_g23850_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.5e-39 167.2 221 44.3
Aqoxy3G01156 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 2.5e-39 166.4 220 45.9
FAN12G1195 Fragaria x ananassa HOM05D000740 ORTHO05D002520 4.3e-39 165.6 209 44.5
FAN12G1520 Fragaria x ananassa HOM05D000740 ORTHO05D002520 7.4e-39 164.9 223 43.9
RcHm_v2.0_Chr4g0433311 Rosa chinensis HOM05D000225 ORTHO05D002520 7.4e-39 164.9 213 45.5
FvH4_4g25871 Fragaria vesca HOM05D000225 ORTHO05D002520 9.6e-39 164.5 223 43.9
Phvul.003G063700 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 1.3e-38 164.1 218 44.0
Medtr5g033490 Medicago truncatula HOM05D000225 ORTHO05D002520 8.2e-38 161.4 213 43.2
PGR119G1031 Punica granatum HOM05D000225 ORTHO05D002520 1.4e-37 160.6 217 43.3
MBI10_g00732_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 2.4e-37 159.8 182 47.8
Lj2g0016247 Lotus japonicus HOM05D000225 ORTHO05D002520 3.1e-37 159.5 200 43.5
Phvul.002G059500 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 3.1e-37 159.5 215 41.9
Lalb_Chr16g0382021 Lupinus albus HOM05D000225 ORTHO05D002520 6.9e-37 158.3 210 41.4
Lj9A444G106 Lonicera japonica HOM05D000225 ORTHO05D002520 1.2e-36 157.5 164 51.8
Aqoxy3G01157 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 2.6e-36 156.4 211 44.1
arahy.Tifrunner.gnm1.ann1.7J5ZWH Arachis hypogaea HOM05D000225 ORTHO05D002520 2.6e-36 156.4 223 41.3
arahy.Tifrunner.gnm1.ann1.6V1TUE Arachis hypogaea HOM05D000225 ORTHO05D002520 3.4e-36 156.0 224 40.6
FvH4_5g05950 Fragaria vesca HOM05D000225 ORTHO05D002520 3.4e-36 156.0 214 41.1
TPR.G38785 Trifolium pratense HOM05D000225 ORTHO05D002520 3.4e-36 156.0 206 43.7
FAN18G4107 Fragaria x ananassa HOM05D000225 ORTHO05D002520 4.5e-36 155.6 214 41.1
Lsat_1_v5_gn_5_15880 Lactuca sativa HOM05D000225 ORTHO05D002520 4.5e-36 155.6 208 43.3
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 7.6e-36 154.8 184 41.8
ECA246G1268 Erigeron canadensis HOM05D000225 ORTHO05D009144 7.6e-36 154.8 210 40.0
VMungo1215G0379 Vigna mungo HOM05D000225 ORTHO05D002520 7.6e-36 154.8 215 42.3
FAN08G1117 Fragaria x ananassa HOM05D000225 ORTHO05D002520 1.0e-35 154.5 214 40.7
Eucgr.B00237 Eucalyptus grandis HOM05D000225 ORTHO05D002520 1.3e-35 154.1 177 45.8
arahy.Tifrunner.gnm1.ann1.REE5L6 Arachis hypogaea HOM05D000225 ORTHO05D002520 2.2e-35 153.3 202 44.6
arahy.Tifrunner.gnm1.ann1.P7CPN3 Arachis hypogaea HOM05D000225 ORTHO05D002520 3.8e-35 152.5 202 44.1
FAN13G0456 Fragaria x ananassa HOM05D000225 ORTHO05D002520 3.8e-35 152.5 214 40.7
Psat2g094040 Pisum sativum HOM05D000225 ORTHO05D002520 6.5e-35 151.8 214 42.1
HanXRQChr05g0154581 Helianthus annuus HOM05D000225 ORTHO05D002520 8.4e-35 151.4 207 38.6
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 5.5e-34 148.7 210 41.4
FAN04G2503 Fragaria x ananassa HOM05D000225 ORTHO05D002520 5.1e-32 142.1 214 39.3
ClCG05G025640 Citrullus lanatus HOM05D000225 ORTHO05D002520 1.8e-29 133.7 193 43.0
MELO3C011965.2 Cucumis melo HOM05D000225 ORTHO05D002520 4.1e-29 132.5 185 43.2
CsaV3_5G031250 Cucumis sativus L. HOM05D000225 ORTHO05D002520 6.9e-29 131.7 176 43.8
MSTRG.572 Avicennia marina HOM05D000225 ORTHO05D002520 5.9e-28 128.6 171 45.0
PSO017G6892 Papaver somniferum HOM05D000225 ORTHO05D002520 5.9e-28 128.6 110 54.5
Eucgr.B00236 Eucalyptus grandis HOM05D000225 ORTHO05D002520 2.9e-27 126.3 177 39.5
Sed0021349 Sechium edule HOM05D000225 ORTHO05D002520 5.0e-27 125.6 205 39.5
Nitab4.5_0003021g0010 Nicotiana tabacum HOM05D000225 ORTHO05D002520 8.5e-27 124.8 114 54.4
MD13G1097500 Malus domestica HOM05D000225 ORTHO05D002520 4.2e-26 122.5 179 43.6
TAR629G3395 Trochodendron aralioides HOM05D000225 ORTHO05D002520 4.2e-26 122.5 111 55.0
ATR0585G088 Amborella trichopoda HOM05D000225 ORTHO05D002520 4.3e-23 112.5 207 35.3
Ca_04581_v3 Cicer arietinum L. HOM05D000225 ORTHO05D002520 3.8e-19 99.4 107 47.7
HPP92_006406 Vanilla planifolia HOM05D000225 ORTHO05D002520 3.3e-15 86.3 204 30.4
Potri.008G187500 Populus trichocarpa HOM05D000225 ORTHO05D002520 4.1e-13 79.3 63 58.7
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 9.1e-13 78.2 66 54.5
Zm00001eb342090 Zea mays HOM05D000225 ORTHO05D002520 5.9e-12 75.5 108 39.8
Sabra15G0105500 Salix brachista HOM05D000805 ORTHO05D000624 1.3e-11 74.3 84 45.2
Cfa012229 Carpinus fangiana HOM05D065004 ORTHO05D002520 5.0e-11 72.4 75 54.7
Haze_08781 Corylus avellana HOM05D000225 ORTHO05D002520 1.9e-10 70.5 77 48.1
SEGI_34148 Sequoiadendron giganteum HOM05D000013 ORTHO05D386948 9.4e-10 68.2 204 24.5
Cc00_g21990 Coffea canephora HOM05D000302 ORTHO05D000334 1.8e-08 63.9 61 52.5
Nn6g35326 Nelumbo nucifera HOM05D000225 ORTHO05D002520 1.5e-07 60.8 206 24.8
TWI36G0069 Tripterygium wilfordii HOM05D000225 ORTHO05D002520 1.5e-07 60.8 59 52.5
Nn8g39069 Nelumbo nucifera HOM05D000225 ORTHO05D002520 7.5e-07 58.5 219 25.1
SalBow2G2057 Salvia bowleyana HOM05D000225 ORTHO05D002520 9.7e-07 58.2 206 22.8
Aqoxy7G03979 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 4.8e-06 55.8 205 24.4
SEGI_19066 Sequoiadendron giganteum HOM05D000225 ORTHO05D002520 4.8e-06 55.8 192 24.0
TAR383G0597 Trochodendron aralioides HOM05D000225 ORTHO05D002520 6.3e-06 55.5 218 24.8


User provided reference genes

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