Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.8e-261 903.7 447 100.0
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 5.9e-197 691.0 408 84.3
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.3e-196 689.9 408 82.4
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.9e-195 686.0 408 82.8
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 3.7e-183 645.2 408 76.7
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 1.6e-178 629.8 501 65.7
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 2.6e-168 595.9 408 73.3
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 9.8e-168 594.0 409 71.9
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 1.6e-165 586.6 412 70.6
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 1.9e-163 579.7 411 69.8
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 4.3e-163 578.6 408 71.6
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.6e-162 576.6 408 68.9
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 4.7e-162 575.1 408 68.4
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 3.1e-161 572.4 408 68.4
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 4.0e-161 572.0 408 68.4
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 7.5e-160 567.8 408 67.9
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 3.7e-159 565.5 409 68.2
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.1e-158 563.9 411 68.1
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 1.1e-158 563.9 408 67.6
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 1.4e-158 563.5 411 67.2
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 3.2e-158 562.4 411 67.9
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 1.2e-157 560.5 411 67.4
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.5e-157 558.9 411 67.9
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 6.6e-156 554.7 408 65.9
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 9.5e-155 550.8 427 63.9
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 3.1e-153 545.8 408 66.2
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 1.2e-152 543.9 408 67.9
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 5.8e-152 541.6 408 67.4
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 7.5e-152 541.2 408 66.7
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.3e-151 540.4 408 67.4
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 6.4e-151 538.1 408 67.9
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.9e-150 536.6 408 67.2
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 4.1e-150 535.4 408 66.9
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 4.1e-150 535.4 412 66.5
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 7.0e-150 534.6 412 66.0
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.6e-149 533.5 408 66.2
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 2.1e-149 533.1 413 65.6
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.1e-149 533.1 408 63.0
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 2.7e-149 532.7 408 65.7
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 6.0e-149 531.6 408 65.4
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 7.8e-149 531.2 408 63.0
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.0e-148 530.8 408 66.4
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.0e-148 530.8 408 63.2
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.3e-148 529.6 411 66.2
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 3.0e-148 529.3 408 65.7
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 5.1e-148 528.5 408 66.4
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.5e-147 526.2 415 64.6
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 7.3e-147 524.6 411 63.7
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 4.7e-146 521.9 408 65.0
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 4.7e-146 521.9 414 65.0
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 2.3e-145 519.6 412 64.6
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 6.8e-145 518.1 378 66.9
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.2e-144 517.3 408 65.2
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.2e-144 517.3 408 64.0
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 1.5e-144 516.9 409 60.9
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 5.8e-144 515.0 408 63.5
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.4e-142 510.4 455 60.0
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 9.2e-142 507.7 407 62.2
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.2e-141 507.3 409 62.3
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 2.1e-141 506.5 453 57.0
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.0e-140 504.2 408 61.5
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.9e-140 502.3 411 60.3
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 3.3e-139 499.2 411 60.3
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 2.8e-138 496.1 408 62.0
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 3.6e-138 495.7 408 60.8
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 3.6e-138 495.7 412 60.4
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.1e-137 494.2 412 60.2
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 4.4e-136 488.8 437 57.4
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 2.2e-135 486.5 409 59.9
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 3.8e-135 485.7 414 58.7
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 4.9e-135 485.3 409 59.2
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 6.4e-135 485.0 409 59.7
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 8.4e-135 484.6 338 72.2
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.1e-134 484.2 409 58.9
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 1.1e-134 484.2 408 62.0
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 1.9e-134 483.4 409 59.2
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.9e-134 483.4 409 59.2
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 1.9e-134 483.4 409 59.4
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 5.4e-134 481.9 409 58.2
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 5.4e-134 481.9 409 60.1
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.2e-133 480.7 409 58.4
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 5.1e-132 475.3 411 61.3
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 8.7e-132 474.6 409 57.9
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 8.7e-132 474.6 410 62.0
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 1.6e-130 470.3 353 67.1
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 6.9e-129 464.9 408 55.6
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 9.0e-129 464.5 323 72.4
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.3e-124 450.7 425 56.0
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 2.1e-122 443.4 408 55.6
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 4.8e-122 442.2 331 67.1
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 9.9e-120 434.5 409 53.8
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 2.2e-119 433.3 378 57.9
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 5.4e-118 428.7 392 55.9
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.2e-117 427.6 408 54.4
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 6.2e-114 415.2 415 53.5
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 2.5e-110 403.3 319 66.5
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 3.7e-106 389.4 352 55.4
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.2e-101 374.4 410 49.0
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 6.1e-93 345.5 262 63.0
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 7.7e-80 302.0 351 48.7
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 4.2e-78 296.2 228 66.2
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 2.7e-64 250.4 423 35.5
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 6.1e-61 239.2 158 75.9
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 2.4e-49 200.7 238 45.8
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 7.0e-49 199.1 426 29.6
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 2.7e-48 197.2 424 29.7
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.7e-39 167.9 494 27.1
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 5.6e-38 162.9 407 30.7
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 2.0e-35 154.5 126 59.5
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 9.9e-27 125.6 178 41.6
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.4e-20 105.1 55 87.3
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 8.9e-20 102.4 61 75.4
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 4.9e-18 96.7 55 81.8
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.7e-15 88.2 57 73.7
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 2.4e-09 67.8 36 80.6
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 2.4e-09 67.8 36 80.6
Aqoxy6G02680 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 3.0e-07 60.8 62 53.2


User provided reference genes

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