Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.7e-207 725.7 360 100.0
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 2.9e-170 602.1 361 82.8
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.5e-158 563.1 380 76.1
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.8e-151 539.7 334 80.2
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.3e-151 539.3 363 76.6
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 6.3e-149 531.2 354 76.0
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.4e-148 530.0 332 79.2
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.8e-148 529.6 355 75.5
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.4e-148 529.3 362 74.9
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.9e-148 527.7 356 76.4
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.2e-147 526.9 354 75.1
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.0e-147 526.2 333 79.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 3.4e-147 525.4 359 73.8
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.4e-147 525.4 354 75.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 5.9e-147 524.6 335 78.2
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.3e-146 523.5 354 73.7
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.3e-146 523.5 360 74.4
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 2.9e-146 522.3 355 75.8
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.8e-146 521.9 354 74.3
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 5.0e-146 521.5 328 77.7
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 5.0e-146 521.5 351 74.4
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.0e-146 521.5 353 73.7
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.5e-146 521.2 355 74.9
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.4e-145 520.0 354 74.0
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.5e-145 519.2 351 75.5
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 5.5e-145 518.1 344 76.7
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 7.2e-145 517.7 355 75.2
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 7.2e-145 517.7 357 74.2
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 9.4e-145 517.3 355 74.6
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.7e-144 515.8 360 73.6
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 2.7e-144 515.8 360 73.6
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 4.7e-144 515.0 354 73.7
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.1e-144 514.6 361 72.0
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.0e-143 513.8 358 74.0
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.0e-143 513.8 379 71.2
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 2.3e-143 512.7 361 72.3
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 2.3e-143 512.7 337 76.3
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 5.1e-143 511.5 354 72.9
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 6.7e-143 511.1 353 75.1
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 8.8e-143 510.8 360 71.9
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.1e-142 510.4 353 72.2
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.5e-142 510.0 355 73.5
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 2.0e-142 509.6 356 73.0
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.0e-142 509.6 356 73.0
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.0e-142 509.6 359 70.8
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 3.3e-142 508.8 334 77.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.7e-142 508.1 356 72.8
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 5.7e-142 508.1 343 72.9
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.7e-142 507.3 331 76.4
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.3e-141 506.9 358 72.9
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.3e-141 506.9 337 74.5
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.7e-141 506.5 340 75.0
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 2.8e-141 505.8 353 72.5
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 3.7e-141 505.4 353 73.4
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 6.3e-141 504.6 352 71.0
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 8.2e-141 504.2 351 73.2
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.1e-140 503.8 356 71.1
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.8e-140 503.1 356 72.5
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.4e-140 502.7 335 75.5
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 4.1e-140 501.9 354 70.1
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 5.3e-140 501.5 366 70.8
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.5e-139 500.0 357 72.3
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.6e-139 499.2 331 75.2
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 7.7e-139 497.7 359 69.9
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.0e-138 497.3 352 71.9
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.3e-138 496.9 352 71.9
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-138 496.9 365 71.0
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 2.2e-138 496.1 352 72.4
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.9e-138 495.7 352 71.3
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.8e-138 495.4 351 72.6
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.8e-138 495.4 356 71.3
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.8e-138 495.4 355 71.3
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.8e-138 495.4 352 71.3
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.1e-137 493.8 370 71.1
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.5e-137 493.4 329 76.0
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.5e-137 493.4 386 67.6
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.5e-137 493.4 355 70.7
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 3.2e-137 492.3 367 68.9
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 4.2e-137 491.9 367 70.3
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 7.2e-137 491.1 349 71.6
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 9.4e-137 490.7 334 74.3
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.2e-136 490.3 352 70.5
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.1e-136 489.6 335 74.6
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 2.7e-136 489.2 349 71.9
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 4.7e-136 488.4 363 68.0
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 6.1e-136 488.0 329 74.8
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.0e-135 487.3 353 70.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 3.9e-135 485.3 331 74.9
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 7.4e-134 481.1 302 79.8
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 7.4e-134 481.1 308 77.9
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 3.7e-133 478.8 347 70.9
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 3.7e-133 478.8 349 70.5
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 8.2e-133 477.6 347 70.3
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.4e-132 476.9 334 75.7
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-132 476.9 354 68.6
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 3.1e-132 475.7 335 73.4
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 9.1e-132 474.2 355 68.7
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 9.1e-132 474.2 321 74.1
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.2e-131 473.8 411 62.0
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.6e-131 472.6 330 71.5
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 3.5e-131 472.2 321 73.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.5e-131 471.9 308 76.3
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 7.7e-131 471.1 354 68.1
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.2e-130 469.5 335 71.6
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.9e-130 469.2 347 70.0
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 3.8e-130 468.8 355 68.5
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 6.5e-130 468.0 355 68.5
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 6.5e-130 468.0 352 69.0
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.1e-129 467.2 358 67.3
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.5e-129 466.8 355 67.9
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.9e-129 466.5 355 67.9
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.9e-129 466.5 341 68.3
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 2.5e-129 466.1 339 68.1
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 9.4e-129 464.2 347 67.7
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.6e-128 462.2 337 68.2
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 1.4e-127 460.3 374 64.2
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.0e-127 459.1 348 67.5
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 4.0e-127 458.8 323 71.2
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 6.3e-125 451.4 338 69.8
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.7e-123 446.0 333 67.3
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 2.9e-122 442.6 359 65.7
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.5e-121 440.3 543 48.8
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.2e-121 439.1 335 68.4
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.4e-119 433.7 265 79.2
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 8.8e-119 431.0 360 63.1
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 8.3e-117 424.5 339 64.6
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 3.8e-114 415.6 281 75.4
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.6e-110 402.9 293 71.7
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 3.4e-110 402.5 356 61.0
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 3.7e-109 399.1 357 61.1
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 8.3e-109 397.9 267 74.5
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 7.3e-97 358.2 317 58.0
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 2.8e-96 356.3 285 65.3
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.0e-94 350.1 227 76.2
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 2.6e-94 349.7 245 70.6
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 9.8e-94 347.8 235 76.6
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.7e-93 345.9 203 84.2
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 6.4e-93 345.1 352 51.1
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 4.7e-88 328.9 267 64.8
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 1.1e-87 327.8 208 78.4
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.2e-85 320.1 289 55.4
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 7.3e-81 305.1 225 69.3
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.9e-73 280.4 172 81.4
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 9.9e-70 268.1 162 82.7
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.2e-67 261.2 193 71.0
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.6e-64 250.8 371 41.2
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.8e-63 247.3 213 62.9
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.4e-63 246.9 191 66.5
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 6.0e-59 232.3 161 72.0
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 8.1e-56 221.9 184 64.7
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.9e-53 213.4 275 45.8
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.5e-46 191.0 336 40.2
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 4.5e-46 189.5 150 67.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 5.7e-41 172.6 193 49.7
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 6.9e-39 165.6 112 72.3
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.5e-28 130.6 151 49.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.1e-26 122.9 304 32.9
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.0e-25 120.9 262 32.1
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 2.6e-25 120.6 381 30.7
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.4e-23 114.8 71 81.7
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.6e-22 111.3 128 49.2
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.5e-20 104.0 91 62.6
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 3.0e-18 97.1 64 70.3
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.4e-15 88.2 62 64.5
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.3e-15 86.3 57 71.9
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.2e-14 85.1 55 78.2
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.3e-10 70.9 139 35.3
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 7.5e-09 65.9 59 57.6


User provided reference genes

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