Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 4.6e-94 347.8 169 100.0
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.7e-72 276.2 185 75.1
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 8.5e-72 273.9 187 74.3
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.4e-71 273.1 189 74.6
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.9e-71 272.7 176 75.6
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 9.4e-71 270.4 185 73.5
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.1e-70 269.2 185 72.4
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 1.0e-69 266.9 191 72.8
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 2.3e-69 265.8 191 72.3
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 3.0e-69 265.4 184 72.3
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 3.9e-69 265.0 170 76.5
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 3.9e-69 265.0 191 71.7
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 6.7e-69 264.2 189 70.9
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 8.8e-69 263.8 189 70.9
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.1e-68 263.5 185 71.9
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.1e-68 263.5 191 71.7
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.3e-67 260.0 185 70.3
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.1e-66 256.9 183 71.0
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.8e-66 256.1 191 69.6
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.8e-66 256.1 185 70.3
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.1e-66 255.4 189 69.3
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 3.1e-66 255.4 189 69.3
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 4.1e-66 255.0 191 69.1
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 5.3e-66 254.6 183 69.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 9.1e-66 253.8 176 72.2
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.2e-65 253.4 191 66.5
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 1.2e-65 253.4 190 67.9
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.2e-65 253.4 171 71.9
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.2e-65 253.4 191 66.5
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.2e-65 253.4 191 66.5
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.5e-65 253.1 179 68.2
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 2.0e-65 252.7 175 70.3
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 2.0e-65 252.7 190 66.8
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 2.6e-65 252.3 218 63.8
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 2.6e-65 252.3 175 70.9
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.5e-65 251.9 197 66.5
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 3.5e-65 251.9 193 68.4
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.5e-65 251.5 184 67.9
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 5.9e-65 251.1 185 69.7
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.0e-64 250.4 190 67.9
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.3e-64 250.0 185 67.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.3e-64 250.0 191 67.0
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.3e-64 250.0 169 72.2
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.7e-64 249.6 188 70.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 5.0e-64 248.1 166 72.9
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 5.0e-64 248.1 176 67.0
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 6.5e-64 247.7 191 67.0
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 1.9e-63 246.1 177 70.1
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 2.5e-63 245.7 189 67.7
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 5.5e-63 244.6 182 65.4
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 5.5e-63 244.6 179 68.2
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 5.5e-63 244.6 176 69.3
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 1.6e-62 243.0 168 69.6
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.1e-62 242.7 184 66.3
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.1e-62 242.7 190 65.3
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.1e-62 242.7 182 65.4
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.7e-62 242.3 190 65.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 3.6e-62 241.9 183 67.2
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 4.7e-62 241.5 183 67.2
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 8.0e-62 240.7 183 67.2
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 8.0e-62 240.7 185 65.9
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 3.0e-61 238.8 164 71.3
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 3.9e-61 238.4 185 64.3
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.5e-60 236.5 184 66.8
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 7.4e-60 234.2 180 65.0
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 7.4e-60 234.2 168 68.5
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 9.7e-60 233.8 162 71.6
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.7e-59 233.0 184 62.0
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.8e-59 232.3 168 66.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.8e-58 229.6 199 61.8
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 1.8e-58 229.6 191 63.9
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 1.8e-58 229.6 191 63.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 5.3e-58 228.0 190 61.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.2e-57 226.9 183 62.3
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.6e-57 226.5 180 64.4
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 4.5e-57 224.9 182 64.3
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.5e-57 224.9 159 71.1
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 5.9e-57 224.6 182 63.7
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 5.9e-57 224.6 182 63.7
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 5.9e-57 224.6 182 63.7
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.9e-56 222.2 167 65.3
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 3.8e-56 221.9 178 64.0
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 5.0e-56 221.5 171 64.9
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 6.5e-56 221.1 178 62.9
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 8.5e-56 220.7 179 63.7
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.9e-55 219.5 183 63.4
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.5e-55 219.2 183 62.8
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 3.2e-55 218.8 176 63.1
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 4.2e-55 218.4 179 63.1
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 6.1e-54 214.5 180 61.7
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 6.7e-53 211.1 180 60.6
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 7.0e-50 201.1 213 51.2
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 1.6e-49 199.9 102 92.2
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 3.5e-49 198.7 168 56.5
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 3.8e-48 195.3 176 55.7
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 1.0e-45 187.2 180 54.4
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 3.0e-45 185.7 148 64.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 6.8e-45 184.5 166 59.6
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 9.1e-42 174.1 180 51.1
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 2.3e-40 169.5 136 66.2
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 3.8e-40 168.7 189 53.4
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 1.2e-36 157.1 131 58.8
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 3.1e-34 149.1 126 57.9
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.4e-34 148.3 95 72.6
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.6e-33 146.7 94 72.3
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.0e-32 144.1 95 70.5
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.6e-32 141.4 95 70.5
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.9e-31 139.8 184 44.0
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 2.0e-28 129.8 177 40.7
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 6.4e-27 124.8 125 58.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.2e-25 120.6 113 58.4
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 5.0e-24 115.2 106 58.5
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 8.6e-24 114.4 109 53.2
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.2e-17 94.0 61 73.8
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.9e-16 89.0 157 35.0
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 5.6e-15 85.1 48 79.2
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 6.4e-11 71.6 48 70.8
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 3.2e-10 69.3 167 27.5
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.0e-08 64.3 178 25.3
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 3.9e-08 62.4 175 27.4
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 8.1e-06 54.7 59 52.5


User provided reference genes

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