Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022615 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 1.1e-93 346.7 173 100.0
Actinidia22073 Actinidia chinensis HOM05D004807 ORTHO05D005915 2.7e-73 278.9 149 93.3
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 3.0e-72 275.4 153 90.2
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 1.5e-71 273.1 155 87.1
Dinv25024 Davidia involucrata HOM05D004807 ORTHO05D005915 5.6e-71 271.2 152 89.5
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 1.3e-70 270.0 154 88.3
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.6e-70 269.6 153 88.9
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 9.3e-66 253.8 156 81.4
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 1.8e-64 249.6 157 78.3
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 1.5e-63 246.5 158 79.7
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 2.8e-62 242.3 162 75.9
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 4.0e-61 238.4 157 77.1
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 3.4e-60 235.3 159 77.4
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 1.3e-59 233.4 163 74.8
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 2.9e-59 232.3 170 71.2
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 3.8e-59 231.9 157 73.2
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 3.8e-59 231.9 156 78.2
Ciclev10011020m.g Citrus clementina HOM05D004807 ORTHO05D005915 4.9e-59 231.5 163 71.2
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 1.4e-58 229.9 168 69.6
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 1.4e-58 229.9 155 74.8
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 1.9e-58 229.6 181 65.7
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 2.5e-58 229.2 159 74.2
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 2.5e-58 229.2 164 68.9
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 3.2e-58 228.8 157 75.2
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 3.2e-58 228.8 160 73.1
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 5.5e-58 228.0 169 69.2
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 5.5e-58 228.0 181 65.2
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 1.6e-57 226.5 153 73.2
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 2.1e-57 226.1 156 73.1
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 2.7e-57 225.7 168 68.5
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 2.7e-57 225.7 181 65.2
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 3.5e-57 225.3 158 72.8
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 3.5e-57 225.3 156 72.4
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 4.6e-57 224.9 156 70.5
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 7.9e-57 224.2 156 73.1
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 1.0e-56 223.8 156 73.1
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 1.3e-56 223.4 168 67.9
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 1.8e-56 223.0 158 72.8
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 2.3e-56 222.6 163 69.3
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 3.0e-56 222.2 157 72.6
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 3.0e-56 222.2 157 72.6
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 5.1e-56 221.5 161 72.0
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 8.7e-56 220.7 161 72.7
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 8.7e-56 220.7 159 73.0
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 8.7e-56 220.7 159 73.0
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 1.5e-55 219.9 163 68.1
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 2.5e-55 219.2 156 71.8
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 2.5e-55 219.2 156 71.2
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 3.3e-55 218.8 157 69.4
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 4.3e-55 218.4 162 69.1
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 4.3e-55 218.4 159 66.7
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.3e-55 218.4 159 66.7
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.3e-55 218.4 159 66.7
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 7.4e-55 217.6 156 71.2
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 9.6e-55 217.2 152 69.7
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 1.6e-54 216.5 159 71.1
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.1e-54 216.1 159 65.4
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.1e-54 216.1 159 64.8
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 2.4e-53 212.6 161 68.3
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 2.4e-53 212.6 159 68.6
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 5.3e-53 211.5 132 75.8
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 1.2e-52 210.3 157 65.6
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 3.4e-52 208.8 157 66.2
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 4.5e-52 208.4 164 64.6
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 4.5e-52 208.4 157 68.2
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 7.6e-52 207.6 161 68.3
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 4.2e-50 201.8 165 66.1
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 1.3e-48 196.8 150 64.7
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 1.8e-48 196.4 158 65.2
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 2.3e-48 196.1 158 62.7
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 3.3e-47 192.2 145 64.8
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 9.7e-47 190.7 167 59.9
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 9.7e-47 190.7 137 69.3
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 1.6e-46 189.9 164 61.0
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.6e-46 189.9 145 64.8
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 3.7e-46 188.7 164 61.6
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 1.1e-45 187.2 137 67.9
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 1.4e-45 186.8 136 68.4
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 1.4e-45 186.8 136 68.4
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 3.1e-45 185.7 136 67.6
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 6.9e-45 184.5 163 60.1
unitig_0.g511 Utricularia gibba HOM05D004807 ORTHO05D005915 6.9e-45 184.5 172 57.6
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 2.0e-44 183.0 136 66.9
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 2.2e-43 179.5 136 66.9
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 3.8e-43 178.7 163 59.5
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 1.1e-42 177.2 136 66.2
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 1.1e-42 177.2 171 56.7
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 1.9e-42 176.4 137 65.0
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 1.9e-42 176.4 137 65.7
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 1.9e-42 176.4 131 61.1
Haze_20076 Corylus avellana HOM05D004807 ORTHO05D005915 2.7e-41 172.6 112 75.9
Cpa.g.sc85.17 Carica papaya HOM05D004807 ORTHO05D005915 3.0e-40 169.1 130 70.0
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 3.0e-40 169.1 131 60.3
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 3.3e-39 165.6 141 55.3
EL10Ac4g10205 Beta vulgaris HOM05D000020 ORTHO05D027019 8.2e-38 161.0 112 72.3
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.1e-37 158.7 101 70.3
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 1.0e-35 154.1 142 54.2
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.3e-35 153.7 100 71.0
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 3.8e-35 152.1 136 54.4
AagrBONN_evm.TU.Sc2ySwM_228.688 Anthoceros agrestis HOM05D004807 ORTHO05D005915 5.0e-35 151.8 129 56.6
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.2e-33 147.1 99 70.7
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.4e-32 143.7 91 71.4
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 1.5e-31 140.2 155 49.0
SEGI_25187 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 6.3e-30 134.8 98 63.3
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 2.9e-27 125.9 106 64.2
SHI30022 Sapria himalayana HOM05D004807 ORTHO05D005915 9.7e-23 110.9 124 47.6
CBR_g51523 Chara braunii HOM05D000019 ORTHO05D000048 8.2e-22 107.8 99 47.5
Psat7g139360 Pisum sativum HOM05D004807 ORTHO05D005915 1.7e-19 100.1 62 69.4
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 8.5e-19 97.8 69 71.0
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.5e-18 97.1 63 69.8
Psat3g169960 Pisum sativum HOM05D002132 ORTHO05D009901 1.6e-17 93.6 62 66.1
AUR62030183 Chenopodium quinoa HOM05D000826 ORTHO05D000250 1.8e-16 90.1 54 77.8
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 1.2e-15 87.4 54 77.8
Cfa020119 Carpinus fangiana HOM05D004807 ORTHO05D021976 1.2e-15 87.4 54 79.6
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 4.4e-15 85.5 54 74.1
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 4.4e-15 85.5 59 74.6
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 1.1e-13 80.9 87 50.6
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 9.1e-13 77.8 65 58.5
CsaV3_7G005520 Cucumis sativus L. HOM05D004807 ORTHO05D005915 3.5e-12 75.9 56 76.8
MCO03G129 Micromonas commoda HOM05D004807 ORTHO05D005915 3.6e-09 65.9 116 33.6
SEGI_09849 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 1.7e-06 57.0 45 62.2


User provided reference genes

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