Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 6.4e-172 607.4 335 100.0
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 2.4e-171 605.5 335 99.7
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 9.7e-136 487.3 313 83.1
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 3.7e-135 485.3 339 83.5
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 3.7e-135 485.3 317 82.3
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 1.1e-134 483.8 354 79.4
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.8e-134 483.0 317 82.0
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.2e-133 480.3 311 82.0
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 1.5e-133 479.9 386 75.1
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 1.5e-133 479.9 386 75.1
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 2.0e-133 479.6 318 81.4
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 7.7e-133 477.6 380 75.5
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 3.8e-132 475.3 361 79.2
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 5.0e-132 474.9 340 80.0
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 6.5e-132 474.6 278 87.8
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 8.5e-132 474.2 320 80.0
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 8.5e-132 474.2 312 80.4
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 1.1e-131 473.8 370 75.9
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 1.1e-131 473.8 345 80.0
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 1.9e-131 473.0 373 74.8
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 1.9e-131 473.0 299 82.9
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 7.2e-131 471.1 312 79.8
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 9.4e-131 470.7 290 84.8
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.2e-130 470.3 316 78.5
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.6e-130 469.9 316 79.4
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 2.7e-130 469.2 317 78.2
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 4.6e-130 468.4 340 74.7
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 1.0e-129 467.2 315 80.0
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 3.0e-129 465.7 312 80.1
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 3.9e-129 465.3 345 74.8
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 6.7e-129 464.5 318 78.9
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 8.8e-129 464.2 357 74.2
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 2.0e-128 463.0 329 77.2
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 3.3e-128 462.2 345 73.3
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.4e-128 461.8 313 78.6
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 7.4e-128 461.1 319 77.1
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 1.1e-126 457.2 370 72.7
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.4e-126 456.8 355 75.8
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 5.3e-126 454.9 402 69.9
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 6.9e-126 454.5 362 75.4
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 1.2e-125 453.8 361 73.4
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.5e-125 453.4 255 91.4
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.6e-125 452.6 329 75.4
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 4.5e-125 451.8 377 71.1
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 4.5e-125 451.8 392 66.8
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 5.9e-125 451.4 380 69.5
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 7.7e-125 451.1 369 72.1
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 1.0e-124 450.7 368 73.1
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.9e-124 449.1 295 81.7
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 3.8e-124 448.7 288 83.3
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 5.0e-124 448.4 323 75.5
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 6.5e-124 448.0 319 80.3
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 8.5e-124 447.6 318 76.7
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 3.2e-123 445.7 356 71.6
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 3.2e-123 445.7 287 82.6
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 4.2e-123 445.3 354 71.5
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 5.5e-123 444.9 289 82.0
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 2.1e-122 443.0 330 73.9
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.6e-122 442.2 289 81.7
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 3.6e-122 442.2 369 69.9
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 7.9e-122 441.0 316 74.7
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 7.9e-122 441.0 255 89.0
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 1.0e-121 440.7 263 85.9
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.0e-121 440.7 289 81.7
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.0e-121 440.7 289 81.7
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 1.4e-121 440.3 325 75.1
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 1.4e-121 440.3 388 68.3
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 1.8e-121 439.9 261 87.0
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 3.9e-121 438.7 362 69.6
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 1.1e-120 437.2 323 73.4
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 1.1e-120 437.2 277 81.9
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 5.3e-118 428.3 329 75.1
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 3.8e-116 422.2 365 71.2
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 8.5e-116 421.0 359 69.4
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.9e-115 419.9 338 69.2
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 2.5e-115 419.5 313 70.6
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 4.2e-115 418.7 288 74.7
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-114 417.2 299 77.3
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 1.6e-114 416.8 316 72.2
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 6.1e-114 414.8 319 73.4
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 6.1e-114 414.8 317 74.1
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 8.0e-114 414.5 320 71.2
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.0e-113 414.1 288 76.4
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.0e-113 414.1 288 76.4
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 1.8e-113 413.3 368 68.8
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 2.3e-113 412.9 287 75.6
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.2e-112 410.6 367 65.9
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 2.0e-112 409.8 323 69.3
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 2.8e-111 406.0 322 68.0
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 2.8e-111 406.0 277 76.9
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 7.0e-110 401.4 268 80.2
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 7.0e-110 401.4 277 76.2
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 7.7e-109 397.9 238 84.0
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.8e-108 395.6 337 73.3
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 8.5e-108 394.4 319 67.4
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.1e-106 388.3 337 73.3
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 1.4e-105 387.1 236 83.5
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 2.6e-104 382.9 319 67.1
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 1.4e-97 360.5 279 67.4
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 6.8e-97 358.2 263 68.1
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 8.8e-97 357.8 260 68.8
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-93 346.3 220 83.6
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 5.6e-91 338.6 263 65.8
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 6.1e-90 335.1 258 67.8
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 8.0e-90 334.7 404 53.5
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.4e-89 334.0 260 65.4
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.9e-87 326.2 338 58.6
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.9e-87 326.2 273 60.8
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.9e-87 326.2 273 60.8
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.9e-83 313.5 261 59.4
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.6e-82 310.5 211 75.4
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.1e-82 310.1 345 51.6
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 2.8e-82 309.7 339 50.4
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.2e-80 304.3 305 64.6
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.6e-74 283.9 164 93.9
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.6e-72 276.6 307 57.0
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.4e-71 271.9 178 79.8
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 5.1e-68 262.3 251 63.3
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 3.1e-57 226.5 221 66.5
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 7.1e-54 215.3 218 54.6
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.4e-46 189.1 127 76.4
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-31 141.0 105 77.1
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 5.5e-30 136.0 93 73.1
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.8e-25 120.9 172 45.3
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.9e-19 100.9 94 69.1
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 9.7e-19 98.6 62 74.2
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 1.3e-18 98.2 288 30.9
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 2.2e-18 97.4 245 30.2
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.5e-16 91.3 106 47.2
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 1.9e-06 57.8 38 71.1


User provided reference genes

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