Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022492 Camellia sinensis var. sinensis HOM05D022497 ORTHO05D024728 2.8e-36 156.4 238 100.0
CSS0028987 Camellia sinensis var. sinensis HOM05D022497 ORTHO05D024728 6.2e-36 155.2 238 99.6
Haze_15115 Corylus avellana HOM05D001563 ORTHO05D001956 2.9e-09 66.6 54 77.8
QL06p045490 Quercus lobata HOM05D022497 ORTHO05D024728 2.9e-09 66.6 54 75.9
vmacro17856 Vaccinium macrocarpon HOM05D001563 ORTHO05D001956 2.9e-09 66.6 51 74.5
Prupe.7G151700 Prunus persica HOM05D001563 ORTHO05D001956 3.8e-09 66.2 55 74.5
GSVIVG01018994001 Vitis vinifera HOM05D022497 ORTHO05D024728 1.2e-07 61.2 55 74.5
Actinidia36546 Actinidia chinensis HOM05D001563 ORTHO05D001956 2.1e-07 60.5 47 76.6
CANSAT01G0666 Cannabis sativa HOM05D001563 ORTHO05D001956 2.7e-07 60.1 55 67.3
FvH4_1g13680 Fragaria vesca HOM05D001563 ORTHO05D001956 2.7e-07 60.1 52 67.3
FAN19G0548 Fragaria x ananassa HOM05D001563 ORTHO05D001956 2.7e-07 60.1 52 67.3
FAN23G0428 Fragaria x ananassa HOM05D001563 ORTHO05D001956 2.7e-07 60.1 52 67.3
RcHm_v2.0_Chr2g0102011 Rosa chinensis HOM05D001563 ORTHO05D001956 4.6e-07 59.3 51 68.6
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 7.9e-07 58.5 51 66.7
Cfa004284 Carpinus fangiana HOM05D001563 ORTHO05D001956 2.3e-06 57.0 44 77.3
Sed0006575 Sechium edule HOM05D001563 ORTHO05D001956 3.0e-06 56.6 53 69.8
Lj4A198G28 Lonicera japonica HOM05D022497 ORTHO05D024728 5.1e-06 55.8 48 62.5
CSS0042908 Camellia sinensis var. sinensis HOM05D001563 ORTHO05D001956 6.7e-06 55.5 49 71.4
MELO3C011498.2 Cucumis melo HOM05D001563 ORTHO05D001956 6.7e-06 55.5 53 67.9
CiPaw.02G015700 Carya illinoinensis HOM05D001563 ORTHO05D001956 8.7e-06 55.1 54 68.5


User provided reference genes

Program Settings