Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.1e-69 266.5 137 100.0
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.1e-66 256.5 137 96.4
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.5e-66 255.4 137 97.1
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 9.0e-64 246.9 137 91.2
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.6e-63 245.4 137 89.8
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 4.5e-63 244.6 137 89.1
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 9.9e-63 243.4 137 89.1
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 2.2e-62 242.3 137 87.6
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.9e-62 241.9 137 87.6
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.9e-62 241.9 137 87.6
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 2.9e-62 241.9 137 87.6
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 87.6
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 88.3
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 6.4e-62 240.7 135 88.9
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 8.4e-62 240.4 137 86.9
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 8.4e-62 240.4 137 86.9
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.4e-61 239.6 137 86.9
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.4e-61 239.6 137 86.9
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 3.2e-61 238.4 137 88.3
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 4.2e-61 238.0 132 90.2
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 9.3e-61 236.9 142 88.0
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 2.1e-60 235.7 133 88.7
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 2.1e-60 235.7 138 87.0
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 3.5e-60 235.0 137 85.4
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 4.6e-60 234.6 133 88.0
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 4.6e-60 234.6 144 84.7
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 6.0e-60 234.2 136 86.0
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.0e-59 233.4 138 87.0
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.8e-59 232.6 137 84.7
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 3.0e-59 231.9 148 82.4
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 84.7
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.9e-59 231.5 145 84.8
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 84.7
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 5.1e-59 231.1 137 83.9
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 5.1e-59 231.1 137 86.9
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 6.7e-59 230.7 137 83.9
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 6.7e-59 230.7 137 85.4
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 8.7e-59 230.3 137 83.9
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 2.5e-58 228.8 136 83.1
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 2.5e-58 228.8 136 83.1
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 2.5e-58 228.8 136 83.1
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 4.3e-58 228.0 134 84.3
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 4.3e-58 228.0 137 83.2
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 4.3e-58 228.0 137 84.7
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 5.6e-58 227.6 137 81.0
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 5.6e-58 227.6 139 84.2
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 7.4e-58 227.3 129 87.6
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.3e-57 226.5 136 82.4
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 2.1e-57 225.7 137 79.6
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 2.8e-57 225.3 135 83.7
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 2.8e-57 225.3 137 81.8
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 4.8e-57 224.6 137 80.3
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 4.8e-57 224.6 137 81.0
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 8.2e-57 223.8 140 80.7
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 2.4e-56 222.2 132 83.3
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 4.0e-56 221.5 169 73.4
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 4.0e-56 221.5 129 83.7
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 4.0e-56 221.5 164 72.6
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 5.3e-56 221.1 137 81.0
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 1.2e-55 219.9 132 81.8
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 1.5e-55 219.5 137 81.8
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 1.5e-55 219.5 129 85.3
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 1.5e-55 219.5 137 81.8
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 2.0e-55 219.2 137 81.0
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 2.0e-55 219.2 140 77.1
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 3.4e-55 218.4 137 81.0
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 80.3
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 80.3
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 80.3
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 5.8e-55 217.6 137 80.3
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 5.8e-55 217.6 137 80.3
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 5.8e-55 217.6 137 80.3
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.0e-54 216.9 142 78.2
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 1.0e-54 216.9 144 77.1
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 1.3e-54 216.5 138 79.7
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.3e-54 216.5 137 79.6
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 3.8e-54 214.9 137 78.8
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 6.5e-54 214.2 137 78.8
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 8.4e-54 213.8 137 78.1
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 8.4e-54 213.8 140 75.7
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 8.4e-54 213.8 123 87.0
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 1.9e-53 212.6 123 86.2
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 2.5e-53 212.2 144 76.4
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 5.5e-53 211.1 137 78.8
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 5.5e-53 211.1 136 82.4
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 7.1e-53 210.7 129 82.2
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 7.1e-53 210.7 133 78.9
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 9.3e-53 210.3 137 77.4
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 1.2e-52 209.9 128 82.8
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.2e-52 209.9 137 78.1
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 1.6e-52 209.5 126 85.7
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.1e-52 209.1 110 99.1
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.7e-52 208.8 140 80.0
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 1.3e-51 206.5 127 80.3
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 1.1e-50 203.4 137 77.4
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.5e-50 203.0 125 83.2
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.5e-50 203.0 125 83.2
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.5e-50 203.0 137 76.6
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.5e-50 202.2 123 82.1
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 6.3e-49 197.6 131 74.0
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 6.3e-49 197.6 131 74.0
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 9.0e-48 193.7 110 89.1
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.5e-47 193.0 131 72.5
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 2.6e-47 192.2 110 89.1
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 4.5e-47 191.4 128 71.1
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 7.7e-47 190.7 110 90.9
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 1.0e-46 190.3 106 91.5
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.9e-46 188.7 115 84.3
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 6.1e-44 181.0 112 83.0
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 7.9e-44 180.6 124 68.5
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.0e-43 180.3 114 81.6
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 1.8e-43 179.5 145 69.0
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 2.5e-42 175.6 107 86.0
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 9.7e-42 173.7 126 71.4
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 2.2e-41 172.6 113 80.5
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 1.1e-40 170.2 110 80.9
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 5.0e-38 161.4 106 75.5
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 6.5e-38 161.0 118 72.9
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 6.1e-36 154.5 115 66.1
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 7.9e-36 154.1 133 63.2
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 1.1e-34 150.2 182 51.1
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 2.0e-34 149.4 140 62.1
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 5.7e-34 147.9 112 69.6
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 5.7e-34 147.9 84 90.5
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.7e-33 146.4 85 87.1
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 2.2e-33 146.0 84 90.5
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 5.3e-32 141.4 84 88.1
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 6.5e-30 134.4 86 81.4
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 9.4e-29 130.6 84 83.3
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 3.6e-28 128.6 104 60.6
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 5.2e-27 124.8 74 85.1
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 5.2e-27 124.8 100 67.0
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.1e-26 123.6 120 57.5
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 2.0e-26 122.9 132 55.3
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.8e-24 116.3 114 50.9
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.2e-23 113.6 64 85.9
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 1.3e-22 110.2 94 62.8
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 1.7e-22 109.8 65 81.5
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 3.6e-20 102.1 53 88.7
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 4.0e-19 98.6 53 84.9
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 2.0e-18 96.3 128 39.1
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 7.5e-18 94.4 60 85.0
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.3e-17 93.6 62 75.8
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.2e-17 92.8 52 80.8
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 3.1e-16 89.0 61 75.4
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 5.3e-16 88.2 61 75.4
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 1.2e-15 87.0 124 42.7
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.0e-14 84.0 77 58.4
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 6.5e-14 81.3 157 38.9
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 6.5e-14 81.3 45 82.2
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 6.3e-09 64.7 120 36.7
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.2e-07 60.5 55 60.0
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.5e-07 58.5 41 73.2


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