Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022278 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 5.5e-27 124.8 145 100.0
Actinidia35547 Actinidia chinensis HOM05D004370 ORTHO05D005084 9.0e-14 80.9 59 74.6
MD06G1169400 Malus domestica HOM05D004370 ORTHO05D005084 4.2e-11 72.0 58 67.2
Ciclev10018122m.g Citrus clementina HOM05D004370 ORTHO05D005084 5.5e-11 71.6 61 68.9
CsaV3_6G052680 Cucumis sativus L. HOM05D004370 ORTHO05D005084 7.2e-11 71.2 58 67.2
Cpa.g.sc285.3 Carica papaya HOM05D004370 ORTHO05D005084 2.1e-10 69.7 62 64.5
Gohir.D10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 2.1e-10 69.7 62 71.0
Prupe.5G168200 Prunus persica HOM05D004370 ORTHO05D005084 2.7e-10 69.3 55 67.3
MBI05_g12101_MAGBIO Magnolia biondii HOM05D004370 ORTHO05D005084 7.9e-10 67.8 58 69.0
Duzib160G0857 Durio zibethinus HOM05D004370 ORTHO05D005084 1.8e-09 66.6 61 63.9
MELO3C007041.2 Cucumis melo HOM05D004370 ORTHO05D005084 2.3e-09 66.2 58 65.5
CSS0027232 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 5.1e-09 65.1 42 81.0
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea HOM05D004370 ORTHO05D005084 6.7e-09 64.7 58 65.5
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea HOM05D004370 ORTHO05D005084 6.7e-09 64.7 58 65.5
Gohir.A10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 8.8e-09 64.3 62 67.7
Gorai.011G006200 Gossypium raimondii HOM05D004370 ORTHO05D005084 8.8e-09 64.3 62 67.7
Lalb_Chr10g0106891 Lupinus albus HOM05D004370 ORTHO05D005084 1.5e-08 63.5 56 66.1
Sed0020090 Sechium edule HOM05D004370 ORTHO05D005084 1.5e-08 63.5 58 63.8
COL.COLO4_26893 Corchorus olitorius HOM05D004370 ORTHO05D005084 2.5e-08 62.8 53 66.0
LjContig00310g0017486 Lotus japonicus HOM05D004370 ORTHO05D005084 2.5e-08 62.8 56 64.3
Sc10g0006890 Simmondsia chinensis HOM05D004370 ORTHO05D005084 5.7e-08 61.6 62 62.9
CSS0048817 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 7.4e-08 61.2 42 78.6
Zm00001eb117150 Zea mays HOM05D004370 ORTHO05D005084 1.7e-07 60.1 58 56.9
Zm00001eb300870 Zea mays HOM05D004370 ORTHO05D005084 1.7e-07 60.1 58 56.9
Solyc01g094540.4 Solanum lycopersicum HOM05D004370 ORTHO05D005084 2.8e-07 59.3 58 60.3
Sopen01g038350 Solanum pennellii HOM05D004370 ORTHO05D005084 2.8e-07 59.3 58 60.3
MD14G1174700 Malus domestica HOM05D004370 ORTHO05D005084 3.7e-07 58.9 52 63.5
ClCG01G025430 Citrullus lanatus HOM05D004370 ORTHO05D005084 6.3e-07 58.2 58 60.3
Psat2g015400 Pisum sativum HOM05D004370 ORTHO05D005084 8.2e-07 57.8 58 63.8
PSO339G5217 Papaver somniferum HOM05D004370 ORTHO05D005084 1.8e-06 56.6 60 60.0
PSO384G4426 Papaver somniferum HOM05D004370 ORTHO05D005084 1.8e-06 56.6 60 60.0
Phvul.008G264900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 1.8e-06 56.6 54 61.1
Dinv04119 Davidia involucrata HOM05D004370 ORTHO05D005084 3.1e-06 55.8 38 73.7
Dinv23904 Davidia involucrata HOM05D004370 ORTHO05D005084 5.3e-06 55.1 47 68.1
Nn1g09322 Nelumbo nucifera HOM05D004370 ORTHO05D005084 5.3e-06 55.1 45 66.7
Phvul.008G234900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 6.9e-06 54.7 54 59.3
Potri.001G440100 Populus trichocarpa HOM05D004370 ORTHO05D005084 9.1e-06 54.3 44 63.6


User provided reference genes

Program Settings