Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.2e-259 897.9 457 100.0
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 9.4e-259 896.3 457 99.8
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.7e-221 771.9 461 86.6
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 2.4e-209 732.3 459 82.1
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 2.4e-209 732.3 462 82.5
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.2e-205 719.9 469 81.7
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 4.6e-205 718.0 459 81.3
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 7.8e-205 717.2 461 80.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.3e-204 716.5 458 79.9
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.1e-203 713.4 460 79.1
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 3.3e-203 711.8 457 82.5
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.1e-201 706.8 463 77.8
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.4e-201 706.4 458 78.6
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.2e-200 703.4 460 78.7
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 6.4e-199 697.6 460 78.7
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.4e-198 696.4 461 77.9
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 3.2e-198 695.3 461 77.7
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 5.4e-198 694.5 468 75.4
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 7.1e-198 694.1 461 77.2
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 9.3e-198 693.7 454 80.0
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.2e-197 693.3 461 77.7
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 1.6e-197 693.0 461 77.9
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 3.5e-197 691.8 459 77.1
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 3.5e-197 691.8 460 76.7
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 4.6e-197 691.4 461 77.2
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.6e-197 691.4 462 75.5
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 6.0e-197 691.0 461 77.4
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 6.0e-197 691.0 461 77.7
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 2.3e-196 689.1 468 77.1
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.3e-196 689.1 461 77.9
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 5.1e-196 688.0 461 76.8
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.5e-195 686.4 462 76.6
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 4.3e-195 684.9 481 74.2
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 7.4e-195 684.1 464 76.9
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 9.6e-195 683.7 493 73.2
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.3e-194 683.3 461 77.2
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 1.6e-194 682.9 467 75.4
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.8e-194 681.4 460 75.2
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.2e-194 681.0 464 75.0
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.4e-193 679.9 468 77.4
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 5.3e-193 677.9 465 75.9
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 9.0e-193 677.2 460 75.2
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 9.0e-193 677.2 460 76.3
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.5e-192 676.4 460 75.2
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 2.0e-192 676.0 465 75.9
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 2.0e-192 676.0 465 76.1
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 3.4e-192 675.2 468 76.1
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.5e-192 674.9 468 76.1
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.7e-191 672.9 465 75.9
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 2.2e-191 672.5 468 75.9
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 2.9e-191 672.2 465 75.5
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 4.9e-191 671.4 461 74.0
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 6.4e-191 671.0 459 76.9
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.1e-189 666.0 460 74.3
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 2.1e-189 666.0 460 74.1
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 2.1e-189 666.0 468 74.4
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 2.1e-189 666.0 487 73.3
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.1e-189 666.0 441 77.3
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 6.0e-189 664.5 467 72.8
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.3e-188 662.5 465 74.8
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 3.9e-188 661.8 463 73.2
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 5.1e-188 661.4 458 74.2
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 5.1e-188 661.4 470 71.9
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 5.1e-188 661.4 460 75.0
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 8.7e-188 660.6 461 74.4
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.9e-187 659.4 460 73.5
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 2.5e-187 659.1 509 69.0
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.3e-187 658.7 461 74.0
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 4.3e-187 658.3 462 74.9
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 4.3e-187 658.3 427 79.9
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 7.4e-187 657.5 460 74.6
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 9.6e-187 657.1 463 73.0
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 4.8e-186 654.8 427 79.2
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.8e-186 654.8 465 74.6
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 1.8e-185 652.9 463 73.0
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.0e-184 649.4 463 71.9
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 2.0e-184 649.4 463 73.7
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.4e-184 648.7 463 72.4
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 5.8e-184 647.9 468 72.0
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 2.2e-183 646.0 463 71.3
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 4.9e-183 644.8 398 80.7
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.1e-182 643.7 434 77.0
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.1e-182 643.7 468 72.6
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 4.2e-182 641.7 401 78.8
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 2.1e-181 639.4 463 71.7
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 2.1e-181 639.4 463 71.7
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 2.1e-181 639.4 463 71.7
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 6.0e-181 637.9 469 71.4
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 6.0e-181 637.9 463 71.1
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.0e-180 637.1 470 70.4
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 8.7e-180 634.0 420 76.2
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.5e-179 633.3 464 71.1
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 7.4e-179 630.9 464 71.3
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 9.6e-179 630.6 463 70.0
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 9.6e-179 630.6 464 71.3
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.3e-178 630.2 463 70.6
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 6.3e-178 627.9 463 70.2
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 7.6e-176 620.9 415 78.8
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 2.2e-175 619.4 467 69.4
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.4e-174 616.7 419 74.5
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 2.7e-173 612.5 457 70.5
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 6.7e-172 607.8 465 68.8
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 4.3e-171 605.1 464 69.0
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 8.2e-170 600.9 460 68.5
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.4e-169 600.1 491 65.8
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.8e-164 583.2 454 66.5
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 6.7e-164 581.3 456 65.8
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 6.7e-164 581.3 460 65.9
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 6.9e-161 571.2 416 69.2
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.3e-156 556.2 398 72.4
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 3.3e-147 525.8 318 84.3
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 2.9e-135 486.1 399 61.7
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.1e-134 484.2 382 67.8
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.0e-127 461.1 471 54.4
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.3e-124 449.9 403 56.3
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.9e-118 430.3 460 52.6
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 9.5e-102 374.8 287 63.4
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.2e-101 374.4 414 51.4
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 6.2e-101 372.1 258 76.0
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 3.5e-96 356.3 554 38.3
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.8e-84 317.4 188 85.1
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 5.5e-65 252.7 267 54.3
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 7.2e-57 225.7 251 53.4
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 9.4e-57 225.3 251 53.4
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.6e-56 223.0 207 61.4
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.2e-45 187.6 145 64.8
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.5e-43 181.4 119 83.2
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.0e-43 181.0 146 67.8
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 8.8e-39 165.6 166 59.0
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.1e-36 158.7 123 69.1
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 4.4e-30 136.7 399 29.1
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 1.8e-23 114.8 60 93.3
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.1e-17 95.5 57 84.2
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 2.8e-16 90.9 70 71.4
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.4e-15 88.6 59 67.8
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 5.9e-11 73.2 65 64.6


User provided reference genes

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