Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 7.9e-230 800.0 391 100.0
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 8.2e-187 657.1 386 84.5
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.8e-186 656.0 387 83.5
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.1e-186 654.8 384 84.1
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 5.3e-186 654.4 386 83.9
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.7e-184 649.4 388 82.2
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.2e-184 649.0 378 83.9
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 8.5e-184 647.1 389 82.8
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 5.7e-180 634.4 382 80.6
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 7.5e-180 634.0 391 79.0
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.7e-179 631.7 380 80.3
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 1.1e-178 630.2 379 80.7
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.4e-178 629.0 378 80.2
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 7.0e-178 627.5 382 79.1
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.6e-177 626.3 379 79.9
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 1.6e-177 626.3 380 77.9
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 2.0e-177 625.9 376 80.9
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 2.7e-177 625.5 382 78.5
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 3.5e-177 625.2 378 78.6
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 3.5e-177 625.2 384 79.2
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 4.5e-177 624.8 378 81.2
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 7.7e-177 624.0 376 81.1
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 1.7e-176 622.9 376 80.1
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 5.0e-176 621.3 388 76.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 8.5e-176 620.5 380 78.2
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 8.5e-176 620.5 384 78.4
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 1.5e-175 619.8 388 77.1
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.5e-175 619.8 373 81.0
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.5e-175 619.8 393 77.6
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.5e-175 619.8 376 78.7
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 1.9e-175 619.4 378 78.6
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 2.5e-175 619.0 386 76.9
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.5e-175 619.0 386 76.9
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 3.2e-175 618.6 386 76.9
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 3.2e-175 618.6 375 79.2
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 5.5e-175 617.8 380 78.7
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 9.4e-175 617.1 381 78.0
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 9.4e-175 617.1 384 78.1
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 1.2e-174 616.7 383 78.3
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 1.2e-174 616.7 383 78.3
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.2e-174 616.7 383 78.1
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.2e-174 616.7 381 78.2
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 2.7e-174 615.5 387 76.2
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.1e-174 614.4 381 76.6
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.0e-174 614.0 378 77.2
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 8.0e-174 614.0 378 77.2
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 1.0e-173 613.6 376 78.5
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.0e-173 613.6 376 78.5
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 1.8e-173 612.8 386 76.9
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.0e-173 612.1 384 76.6
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 4.0e-173 611.7 383 76.5
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 6.8e-173 610.9 391 75.4
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 8.8e-173 610.5 380 76.8
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.2e-172 610.1 386 75.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.2e-172 610.1 372 78.8
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 4.4e-172 608.2 384 77.9
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 5.7e-172 607.8 388 76.8
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 5.7e-172 607.8 377 78.2
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 7.5e-172 607.4 377 77.5
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 2.8e-171 605.5 382 77.7
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 4.9e-171 604.7 381 77.4
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 6.3e-171 604.4 388 74.7
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.4e-170 603.2 389 75.8
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 2.4e-170 602.4 392 74.5
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 3.1e-170 602.1 374 77.0
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 4.1e-170 601.7 382 77.0
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 4.1e-170 601.7 381 75.6
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 4.1e-170 601.7 377 77.5
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 5.4e-170 601.3 383 76.0
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 7.0e-170 600.9 381 75.6
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.7e-169 599.0 384 76.0
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 2.7e-169 599.0 382 75.9
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 4.5e-169 598.2 381 74.3
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 5.9e-169 597.8 372 77.7
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.7e-168 596.3 384 76.3
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-168 596.3 367 78.2
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.6e-168 594.0 381 75.1
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 8.6e-168 594.0 376 76.1
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-167 593.2 380 75.5
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.9e-167 592.8 375 76.0
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 3.3e-167 592.0 372 76.1
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 3.3e-167 592.0 383 75.2
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.3e-167 592.0 393 74.3
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 9.5e-167 590.5 379 76.0
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 1.2e-166 590.1 373 78.3
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.6e-166 589.7 377 75.9
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 6.1e-166 587.8 371 75.7
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 1.4e-165 586.6 385 74.0
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.8e-165 586.3 384 74.0
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 3.0e-165 585.5 376 74.5
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 4.0e-165 585.1 388 74.2
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 2.0e-164 582.8 384 74.0
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.4e-164 582.0 384 73.7
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 5.7e-164 581.3 375 74.4
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.7e-163 579.7 384 74.0
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 4.9e-163 578.2 374 74.9
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.1e-162 577.0 396 70.2
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.4e-162 575.9 392 73.2
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.0e-160 570.5 379 74.4
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 2.5e-159 565.8 366 75.4
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.3e-159 564.3 387 72.1
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 6.8e-157 557.8 387 70.3
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 8.9e-157 557.4 378 72.5
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 8.9e-157 557.4 381 70.9
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 2.0e-156 556.2 422 66.1
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 9.8e-156 553.9 385 73.0
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 9.8e-156 553.9 386 71.0
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 3.2e-154 548.9 380 70.8
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.3e-152 543.5 382 69.9
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-152 543.1 370 70.3
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.6e-152 541.2 374 69.8
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.1e-151 540.4 453 63.6
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.5e-151 539.3 380 69.5
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-149 533.5 372 70.4
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.8e-149 533.1 381 69.0
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.4e-148 528.5 383 68.9
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.7e-147 526.6 377 70.0
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 4.6e-145 518.5 324 77.2
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 6.0e-145 518.1 390 66.4
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 7.8e-145 517.7 372 66.4
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.2e-142 510.4 375 64.5
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.7e-142 508.4 375 67.7
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.5e-140 503.4 375 66.7
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.9e-139 498.4 350 66.6
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.9e-138 496.5 362 64.9
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.4e-138 496.1 298 80.2
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 4.7e-134 481.9 378 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.4e-132 475.7 386 60.6
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-131 473.4 309 74.1
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 3.3e-127 459.1 733 40.7
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.3e-126 457.2 350 63.7
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 6.2e-126 454.9 266 84.6
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 3.1e-125 452.6 364 61.8
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.0e-120 436.0 381 59.6
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.4e-117 427.2 353 56.7
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.5e-116 423.7 329 63.2
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.5e-116 423.7 239 81.6
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 1.4e-109 400.6 258 73.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.3e-104 384.0 362 56.1
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 1.8e-101 373.6 219 79.5
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 7.6e-100 368.2 367 50.1
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 1.5e-87 327.4 247 61.1
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.8e-86 323.2 366 49.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.1e-81 307.0 308 54.2
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.9e-74 283.9 221 65.6
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 5.4e-53 212.6 138 76.1
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.4e-45 187.2 103 88.3
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.7e-44 183.7 114 77.2
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.1e-42 178.3 171 51.5
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-42 177.6 107 81.3
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 4.3e-42 176.4 107 80.4
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 1.6e-41 174.5 107 80.4
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.0e-40 171.8 107 79.4
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.0e-39 167.5 126 65.1
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 6.4e-38 162.5 107 77.6
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 5.4e-37 159.5 97 80.4
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.3e-35 154.1 120 63.3
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.4e-30 136.0 117 60.7
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 3.6e-25 120.2 78 74.4
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.6e-23 114.0 64 82.8
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 7.6e-23 112.5 64 84.4
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.6e-20 104.8 71 69.0
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 2.7e-20 104.0 99 56.6
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 6.6e-19 99.4 59 79.7
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 6.2e-17 92.8 84 57.1
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 5.8e-15 86.3 87 55.2
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 9.9e-15 85.5 127 44.1
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 4.9e-14 83.2 71 62.0
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.0e-11 75.5 46 69.6
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 1.3e-06 58.5 31 87.1


User provided reference genes

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