Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022082 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 9.3e-156 553.5 284 100.0
CSS0025059 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 2.0e-49 200.3 131 80.2
CSS0011192 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 6.4e-48 195.3 129 79.1
vmacro01708 Vaccinium macrocarpon HOM05D000974 ORTHO05D006000 2.7e-46 189.9 130 75.4
CSS0010237 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 3.5e-46 189.5 131 77.1
Dinv29601 Davidia involucrata HOM05D000974 ORTHO05D006000 3.0e-45 186.4 131 73.3
Manes.07G025100 Manihot esculenta HOM05D000974 ORTHO05D006000 3.0e-45 186.4 138 71.7
Dinv19422 Davidia involucrata HOM05D000974 ORTHO05D006000 1.1e-44 184.5 131 72.5
COL.COLO4_17713 Corchorus olitorius HOM05D000974 ORTHO05D006000 3.3e-44 183.0 131 71.0
Rhsim07G0227800 Rhododendron simsii HOM05D000974 ORTHO05D006000 3.3e-44 183.0 128 73.4
MD08G1243400 Malus domestica HOM05D000974 ORTHO05D006000 4.3e-44 182.6 130 71.5
Duzib132G0946 Durio zibethinus HOM05D000974 ORTHO05D006000 5.6e-44 182.2 131 71.0
Rhsim11G0122100 Rhododendron simsii HOM05D000974 ORTHO05D006000 1.3e-43 181.0 129 72.9
Thecc.02G017200 Theobroma cacao HOM05D000974 ORTHO05D006000 1.3e-43 181.0 131 71.8
Atru.chr9.317 Acer truncatum HOM05D000974 ORTHO05D006000 1.6e-43 180.6 130 72.3
Cfa004480 Carpinus fangiana HOM05D000974 ORTHO05D006000 1.6e-43 180.6 131 71.0
Ca_12589_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 1.6e-43 180.6 137 67.9
Duzib052G0127 Durio zibethinus HOM05D000974 ORTHO05D006000 1.6e-43 180.6 131 71.0
TPR.G5252 Trifolium pratense HOM05D000974 ORTHO05D006000 2.1e-43 180.3 137 68.6
Atru.chr1.4075 Acer truncatum HOM05D000974 ORTHO05D006000 2.8e-43 179.9 130 71.5
Ciclev10000877m.g Citrus clementina HOM05D000974 ORTHO05D006000 2.8e-43 179.9 131 70.2
QL02p100861 Quercus lobata HOM05D000974 ORTHO05D006000 2.8e-43 179.9 131 71.0
GSVIVG01038784001 Vitis vinifera HOM05D000974 ORTHO05D006000 2.8e-43 179.9 131 70.2
Glyma.10G156900 Glycine max HOM05D000974 ORTHO05D006000 3.7e-43 179.5 131 71.0
Lalb_Chr21g0311651 Lupinus albus HOM05D000974 ORTHO05D006000 3.7e-43 179.5 131 71.0
Gohir.A01G185000 Gossypium hirsutum HOM05D000974 ORTHO05D006000 4.8e-43 179.1 131 70.2
Rhsim07G0227600 Rhododendron simsii HOM05D000974 ORTHO05D006000 4.8e-43 179.1 129 72.1
Haze_10037 Corylus avellana HOM05D000974 ORTHO05D006000 6.2e-43 178.7 131 70.2
ECA236G4964 Erigeron canadensis HOM05D000974 ORTHO05D006000 8.1e-43 178.3 130 69.2
MD15G1437700 Malus domestica HOM05D000974 ORTHO05D006000 8.1e-43 178.3 133 69.9
PGR142G3566 Punica granatum HOM05D000974 ORTHO05D006000 8.1e-43 178.3 131 71.0
Gorai.008G045600 Gossypium raimondii HOM05D000974 ORTHO05D006000 1.1e-42 177.9 131 70.2
HanXRQChr06g0176431 Helianthus annuus HOM05D000974 ORTHO05D006000 1.1e-42 177.9 141 67.4
Peaxi162Scf00011g01426 Petunia axillaris HOM05D000974 ORTHO05D006000 1.1e-42 177.9 131 68.7
Potri.004G225500 Populus trichocarpa HOM05D000974 ORTHO05D006000 1.4e-42 177.6 131 71.8
DCAR_006665 Daucus carota HOM05D000974 ORTHO05D006000 1.8e-42 177.2 129 71.3
AUR62001730 Chenopodium quinoa HOM05D000974 ORTHO05D006000 2.4e-42 176.8 131 67.9
AUR62020045 Chenopodium quinoa HOM05D000974 ORTHO05D006000 2.4e-42 176.8 131 67.9
Gohir.D12G043400 Gossypium hirsutum HOM05D000974 ORTHO05D006000 2.4e-42 176.8 131 69.5
HanXRQChr11g0329691 Helianthus annuus HOM05D000974 ORTHO05D006000 2.4e-42 176.8 138 65.9
Sabra01G0171200 Salix brachista HOM05D000974 ORTHO05D006000 2.4e-42 176.8 131 71.0
PGSC0003DMG400024886 Solanum tuberosum HOM05D000974 ORTHO05D006000 5.3e-42 175.6 131 66.4
MSTRG.5204 Avicennia marina HOM05D000974 ORTHO05D006000 9.0e-42 174.9 131 67.2
Cpa.g.sc113.32 Carica papaya HOM05D000974 ORTHO05D006000 9.0e-42 174.9 130 70.0
Ca_04891_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 9.0e-42 174.9 131 68.7
Nitab4.5_0003816g0050 Nicotiana tabacum HOM05D000974 ORTHO05D006000 1.2e-41 174.5 131 67.2
Sopen01g045790 Solanum pennellii HOM05D000974 ORTHO05D006000 1.2e-41 174.5 131 66.4
Psat2g146560 Pisum sativum HOM05D000974 ORTHO05D006000 1.5e-41 174.1 131 69.5
Lsat_1_v5_gn_7_76800 Lactuca sativa HOM05D000974 ORTHO05D006000 2.0e-41 173.7 130 67.7
Lj5g0022297 Lotus japonicus HOM05D000974 ORTHO05D006000 2.0e-41 173.7 131 68.7
MBI06_g06706_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D006000 2.0e-41 173.7 130 69.2
Migut.N00845 Erythranthe guttata HOM05D000974 ORTHO05D006000 2.6e-41 173.3 131 67.9
Phvul.007G182100 Phaseolus vulgaris HOM05D000974 ORTHO05D006000 2.6e-41 173.3 131 68.7
Prupe.1G580800 Prunus persica HOM05D000974 ORTHO05D006000 2.6e-41 173.3 130 69.2
Eucgr.I02775 Eucalyptus grandis HOM05D000974 ORTHO05D006000 3.4e-41 172.9 131 68.7
Lj5C267T12 Lonicera japonica HOM05D000974 ORTHO05D006000 4.5e-41 172.6 131 68.7
Nitab4.5_0002347g0020 Nicotiana tabacum HOM05D000974 ORTHO05D006000 4.5e-41 172.6 131 65.6
Oeu030849.1 Olea europaea HOM05D000974 ORTHO05D006000 5.8e-41 172.2 137 66.4
arahy.Tifrunner.gnm1.ann1.0Q8MRK Arachis hypogaea HOM05D000974 ORTHO05D006000 7.6e-41 171.8 131 67.9
arahy.Tifrunner.gnm1.ann1.DWF5LU Arachis hypogaea HOM05D000974 ORTHO05D006000 7.6e-41 171.8 131 67.9
CANSAT54G1032 Cannabis sativa HOM05D000974 ORTHO05D006000 7.6e-41 171.8 131 67.9
TWI15G1214 Tripterygium wilfordii HOM05D000974 ORTHO05D006000 7.6e-41 171.8 131 67.9
Ah.08g220180 Amaranthus hybridus HOM05D000974 ORTHO05D006000 1.3e-40 171.0 131 65.6
CAN.G855.13 Capsicum annuum HOM05D000974 ORTHO05D006000 1.3e-40 171.0 131 65.6
SalBow8G2098 Salvia bowleyana HOM05D000974 ORTHO05D006000 1.3e-40 171.0 131 67.9
Solyc01g103440.3 Solanum lycopersicum HOM05D000974 ORTHO05D006000 1.3e-40 171.0 131 65.6
VMungo0720G1793 Vigna mungo HOM05D000974 ORTHO05D006000 1.3e-40 171.0 131 67.9
Cc02_g23270 Coffea canephora HOM05D000974 ORTHO05D006000 1.7e-40 170.6 130 66.9
Medtr5g025310 Medicago truncatula HOM05D000974 ORTHO05D006000 1.7e-40 170.6 131 68.7
Aqoxy1G01816 Aquilegia oxysepala HOM05D000974 ORTHO05D006000 3.8e-40 169.5 133 63.9
TAR381G1040 Trochodendron aralioides HOM05D000974 ORTHO05D006000 3.8e-40 169.5 136 64.0
Nitab4.5_0003893g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 6.5e-40 168.7 130 65.4
SalBow4G1817 Salvia bowleyana HOM05D000974 ORTHO05D006000 1.1e-39 167.9 138 65.9
EL10Ac7g16076 Beta vulgaris HOM05D000974 ORTHO05D006000 1.9e-39 167.2 131 65.6
CiPaw.06G174600 Carya illinoinensis HOM05D000974 ORTHO05D006000 1.9e-39 167.2 131 66.4
AT1G09830 Arabidopsis thaliana HOM05D000974 ORTHO05D006000 2.5e-39 166.8 129 65.9
Gorai.002G218200 Gossypium raimondii HOM05D000974 ORTHO05D006000 2.5e-39 166.8 131 65.6
ClCG10G007320 Citrullus lanatus HOM05D000974 ORTHO05D006000 3.2e-39 166.4 131 64.1
Gohir.D01G176200 Gossypium hirsutum HOM05D000974 ORTHO05D006000 4.2e-39 166.0 131 65.6
Nn5g27502 Nelumbo nucifera HOM05D000974 ORTHO05D006000 4.2e-39 166.0 130 65.4
Aa31LG1G5090 Aethionema arabicum HOM05D000974 ORTHO05D006000 7.1e-39 165.2 129 66.7
AL1G20430 Arabidopsis lyrata HOM05D000974 ORTHO05D006000 7.1e-39 165.2 129 65.9
Sc17g0003920 Simmondsia chinensis HOM05D000974 ORTHO05D006000 7.1e-39 165.2 130 64.6
MELO3C016483.2 Cucumis melo HOM05D000974 ORTHO05D006000 1.6e-38 164.1 131 61.8
CsaV3_3G006560 Cucumis sativus L. HOM05D000974 ORTHO05D006000 1.6e-38 164.1 131 61.8
THA.LOC104816783 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 2.1e-38 163.7 129 65.1
Carub.0001s0921 Capsella rubella HOM05D000974 ORTHO05D006000 2.7e-38 163.3 129 64.3
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.5e-38 162.9 129 65.9
ATR0598G043 Amborella trichopoda HOM05D000974 ORTHO05D006000 6.0e-38 162.2 132 62.9
Sed0019412 Sechium edule HOM05D000974 ORTHO05D006000 7.9e-38 161.8 131 62.6
THA.LOC104816816 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 7.9e-38 161.8 129 65.1
BcaC05g24841 Brassica carinata HOM05D000974 ORTHO05D006000 1.0e-37 161.4 129 63.6
C05p07940 Brassica napus HOM05D000974 ORTHO05D006000 1.3e-37 161.0 129 64.3
BolC5t29546H Brassica oleracea HOM05D000974 ORTHO05D006000 1.3e-37 161.0 129 64.3
Hund18885 Selenicereus undatus HOM05D000974 ORTHO05D006000 1.3e-37 161.0 131 64.1
A06p06550 Brassica napus HOM05D000974 ORTHO05D006000 3.0e-37 159.8 129 63.6
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.9e-37 159.5 129 65.1
HPP92_026669 Vanilla planifolia HOM05D000974 ORTHO05D006000 1.5e-36 157.5 132 60.6
BraA06t23866Z Brassica rapa HOM05D000974 ORTHO05D006000 1.9e-36 157.1 129 62.8
Thhalv10007333m.g Eutrema salsugineum HOM05D000974 ORTHO05D006000 3.3e-36 156.4 129 62.0
Sp1g08460 Schrenkiella parvula HOM05D000974 ORTHO05D006000 3.3e-36 156.4 129 61.2
CARHR009850 Cardamine hirsuta HOM05D000974 ORTHO05D006000 5.7e-36 155.6 129 61.2
CDE04G1010 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 9.6e-36 154.8 131 60.3
A08p34320 Brassica napus HOM05D000974 ORTHO05D006000 1.6e-35 154.1 129 60.5
HPP92_001871 Vanilla planifolia HOM05D000974 ORTHO05D006000 2.8e-35 153.3 133 58.6
BcaC07g38528 Brassica carinata HOM05D000974 ORTHO05D006000 4.8e-35 152.5 129 59.7
BraA08t35343Z Brassica rapa HOM05D000974 ORTHO05D006000 4.8e-35 152.5 129 59.7
BcaB03g13541 Brassica carinata HOM05D000974 ORTHO05D006000 8.2e-35 151.8 129 60.5
SEGI_14806 Sequoiadendron giganteum HOM05D000974 ORTHO05D006000 1.1e-34 151.4 136 55.9
PSO170G5315 Papaver somniferum HOM05D000974 ORTHO05D006000 1.4e-34 151.0 154 53.2
Zm00001eb294330 Zea mays HOM05D000974 ORTHO05D006000 1.4e-34 151.0 136 60.3
BolC8t48951H Brassica oleracea HOM05D000974 ORTHO05D006000 2.4e-34 150.2 125 60.0
Os08g0191200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 3.1e-34 149.8 129 61.2
PSO782G2965 Papaver somniferum HOM05D000974 ORTHO05D006000 1.2e-33 147.9 145 54.5
Zm00001eb342350 Zea mays HOM05D000974 ORTHO05D006000 1.2e-33 147.9 129 62.0
Eucgr.I02773 Eucalyptus grandis HOM05D000974 ORTHO05D006000 2.0e-33 147.1 131 58.8
Os12g0197100 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 1.0e-32 144.8 127 60.6
SGA_v2.0_scaffold42G15899 Striga asiatica HOM05D000974 ORTHO05D006000 1.7e-32 144.1 120 55.0
unitig_8.g3588 Utricularia gibba HOM05D000974 ORTHO05D006000 4.2e-31 139.4 118 60.2
Pp3c19_9430 Physcomitrium patens HOM05D000974 ORTHO05D006000 7.9e-30 135.2 134 50.0
Mapoly0041s0149 Marchantia polymorpha HOM05D000974 ORTHO05D006000 3.0e-29 133.3 131 51.1
Pp3c22_7830 Physcomitrium patens HOM05D000974 ORTHO05D006000 6.7e-29 132.1 132 49.2
CBR_g36226 Chara braunii HOM05D000974 ORTHO05D006000 8.7e-29 131.7 131 51.1
SMO358G0426 Selaginella moellendorffii HOM05D000974 ORTHO05D006000 9.7e-28 128.3 134 50.0
FAN10G2816 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.2e-27 127.1 108 65.7
AagrBONN_evm.TU.Sc2ySwM_368.1734 Anthoceros agrestis HOM05D000974 ORTHO05D006000 9.0e-26 121.7 133 48.1
Actinidia38994 Actinidia chinensis HOM05D000974 ORTHO05D006000 2.9e-24 116.7 87 66.7
CDE02G0137 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 5.7e-20 102.4 91 62.6
Cre18.g749497 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 1.3e-19 101.3 131 39.7
MCO16G439 Micromonas commoda HOM05D000974 ORTHO05D006000 1.8e-18 97.4 130 44.6
Cre18.g749647 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 4.1e-18 96.3 131 38.9
Sabra03G0003100 Salix brachista HOM05D000974 ORTHO05D006000 9.1e-18 95.1 64 68.8
Pp3s32_121 Physcomitrium patens HOM05D000974 ORTHO05D006000 5.0e-16 89.4 126 38.1
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 1.5e-12 77.8 129 36.4
arahy.Tifrunner.gnm1.ann1.FF9LB7 Arachis hypogaea HOM05D000974 ORTHO05D006000 2.0e-12 77.4 48 83.3
PRCOL_00005058 Prasinoderma coloniale HOM05D000974 ORTHO05D006000 7.7e-09 65.5 149 35.6
CSS0046241 Camellia sinensis var. sinensis HOM05D017534 ORTHO05D113457 4.7e-06 56.2 63 50.8


User provided reference genes

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