Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021784 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 9.1e-47 189.9 96 100.0
CSS0022582 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 1.9e-15 85.9 67 67.2
Dinv29604 Davidia involucrata HOM05D001829 ORTHO05D003548 2.8e-11 72.0 53 67.9
Dinv19424 Davidia involucrata HOM05D001829 ORTHO05D003548 4.7e-11 71.2 54 64.8
Actinidia01613 Actinidia chinensis HOM05D000487 ORTHO05D000405 4.0e-10 68.2 54 63.0
Actinidia26178 Actinidia chinensis HOM05D001829 ORTHO05D003548 5.2e-10 67.8 50 68.0
GSVIVG01023232001 Vitis vinifera HOM05D001829 ORTHO05D003548 5.2e-10 67.8 50 70.0
Manes.07G025700 Manihot esculenta HOM05D001829 ORTHO05D003548 6.8e-10 67.4 54 64.8
TAR628G0621 Trochodendron aralioides HOM05D001829 ORTHO05D003548 2.0e-09 65.9 57 54.4
TAR381G0284 Trochodendron aralioides HOM05D001829 ORTHO05D003548 2.6e-09 65.5 54 57.4
Haze_10033 Corylus avellana HOM05D001829 ORTHO05D003548 4.4e-09 64.7 52 63.5
Manes.10G116400 Manihot esculenta HOM05D001829 ORTHO05D003548 4.4e-09 64.7 50 62.0
Hma1.2p1_0633F.1_g192740 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 7.6e-09 63.9 50 64.0
Actinidia38991 Actinidia chinensis HOM05D001829 ORTHO05D003548 9.9e-09 63.5 75 49.3
Prupe.1G581100 Prunus persica HOM05D001829 ORTHO05D003548 2.2e-08 62.4 50 62.0
Actinidia00172 Actinidia chinensis HOM05D001829 ORTHO05D003548 2.9e-08 62.0 54 57.4
Cc02_g23320 Coffea canephora HOM05D001829 ORTHO05D003548 2.9e-08 62.0 50 68.0
QL02p100929 Quercus lobata HOM05D001829 ORTHO05D003548 2.9e-08 62.0 54 55.6
Atru.chr6.543 Acer truncatum HOM05D001829 ORTHO05D003548 3.8e-08 61.6 50 58.0
CiPaw.05G003800 Carya illinoinensis HOM05D001829 ORTHO05D003548 3.8e-08 61.6 54 57.4
Nn5g27503 Nelumbo nucifera HOM05D001829 ORTHO05D003548 4.9e-08 61.2 55 50.9
Thecc.02G016800 Theobroma cacao HOM05D001829 ORTHO05D003548 8.4e-08 60.5 50 58.0
Duzib132G1055 Durio zibethinus HOM05D001829 ORTHO05D003548 3.2e-07 58.5 50 58.0
Duzib248G0405 Durio zibethinus HOM05D001829 ORTHO05D003548 9.3e-07 57.0 50 56.0
vmacro19858 Vaccinium macrocarpon HOM05D001829 ORTHO05D003548 1.2e-06 56.6 49 63.3
Gohir.A03G215600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 2.7e-06 55.5 50 54.0
Cpa.g.sc113.29 Carica papaya HOM05D001829 ORTHO05D003548 3.5e-06 55.1 54 50.0
Potri.004G225800 Populus trichocarpa HOM05D001829 ORTHO05D003548 3.5e-06 55.1 67 46.3
Gohir.D12G043600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 6.0e-06 54.3 50 52.0
Gorai.005G265700 Gossypium raimondii HOM05D001829 ORTHO05D003548 6.0e-06 54.3 50 52.0
Gorai.008G045900 Gossypium raimondii HOM05D001829 ORTHO05D003548 6.0e-06 54.3 50 52.0
MD08G1243800 Malus domestica HOM05D001829 ORTHO05D003548 6.0e-06 54.3 50 54.0


User provided reference genes

Program Settings