Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.6e-310 1068.5 534 100.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 9.7e-239 830.1 518 80.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 1.1e-218 763.5 568 71.7
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 3.0e-216 755.4 569 69.9
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.3e-208 729.2 522 70.9
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 6.8e-200 701.0 523 68.6
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.3e-195 686.8 523 67.7
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 2.5e-186 656.0 456 74.6
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 2.1e-185 652.9 521 65.8
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 4.7e-185 651.7 522 64.2
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 4.7e-185 651.7 527 65.1
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 4.9e-182 641.7 522 64.9
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 4.6e-180 635.2 522 62.5
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.3e-179 633.6 521 62.6
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 3.9e-179 632.1 519 64.0
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.5e-178 629.4 519 62.8
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.2e-177 627.1 514 63.2
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 3.1e-176 622.5 541 60.4
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.7e-174 616.7 521 61.8
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 3.8e-174 615.5 451 70.7
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.4e-173 612.8 531 60.5
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 9.2e-173 610.9 533 59.8
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 4.6e-172 608.6 525 59.6
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 7.8e-172 607.8 536 59.3
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 7.8e-172 607.8 533 59.8
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 2.3e-171 606.3 468 67.7
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 5.1e-171 605.1 525 60.2
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.9e-170 603.2 519 62.2
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 7.3e-170 601.3 518 61.6
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 9.6e-170 600.9 533 60.8
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.6e-169 600.1 527 59.2
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 3.1e-168 595.9 524 61.3
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 4.0e-168 595.5 517 61.9
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 6.9e-168 594.7 519 61.7
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.2e-167 594.0 514 60.5
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 9.9e-167 590.9 535 58.1
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.3e-166 590.5 527 56.7
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 4.9e-166 588.6 523 60.2
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 2.4e-165 586.3 510 60.0
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 2.4e-165 586.3 523 58.9
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 3.2e-165 585.9 493 62.7
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 9.3e-165 584.3 522 60.2
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 2.1e-164 583.2 521 59.1
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 3.0e-163 579.3 473 62.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 5.1e-163 578.6 523 57.7
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 8.1e-161 571.2 538 58.0
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 6.9e-160 568.2 535 57.0
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 2.0e-159 566.6 520 56.3
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 7.6e-159 564.7 518 59.1
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.7e-158 563.5 517 58.8
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 6.4e-158 561.6 517 57.6
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 1.2e-156 557.4 547 56.1
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 4.6e-156 555.4 521 56.4
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.3e-155 553.9 518 56.9
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 3.9e-155 552.4 518 56.9
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 1.9e-154 550.1 515 58.6
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 3.3e-154 549.3 420 67.4
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 3.7e-153 545.8 520 55.8
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.8e-152 543.5 525 55.6
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 6.4e-150 535.0 471 62.8
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.4e-149 533.9 523 54.9
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.3e-149 531.2 577 51.6
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 3.5e-148 529.3 534 55.6
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 4.8e-145 518.8 514 54.9
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.1e-144 517.7 514 55.1
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.8e-144 516.9 517 55.1
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 5.3e-144 515.4 517 54.4
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 6.9e-144 515.0 517 54.4
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 3.4e-143 512.7 512 54.9
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 5.8e-143 511.9 524 53.6
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 7.6e-143 511.5 521 52.4
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.0e-142 511.1 514 54.7
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 1.3e-142 510.8 514 53.1
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 1.7e-142 510.4 456 59.2
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 8.4e-142 508.1 514 53.1
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 8.4e-142 508.1 514 53.5
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 1.4e-141 507.3 515 54.2
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-141 507.3 515 54.2
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 1.4e-141 507.3 515 54.2
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.9e-141 506.9 515 53.8
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 7.1e-141 505.0 514 53.3
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 7.9e-140 501.5 516 53.5
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 7.9e-140 501.5 525 52.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 3.9e-139 499.2 525 52.8
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 4.3e-138 495.7 514 53.1
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 2.2e-137 493.4 522 50.2
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.3e-134 484.2 519 52.2
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 5.0e-134 482.3 474 54.4
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 2.5e-133 479.9 537 50.5
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.5e-133 479.9 391 65.2
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.2e-132 477.6 541 51.9
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.2e-132 477.6 536 51.5
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 7.9e-132 474.9 514 51.0
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 6.3e-129 465.3 339 69.6
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.4e-125 454.1 254 83.5
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 6.7e-123 445.3 388 60.1
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 2.2e-113 413.7 545 42.8
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 8.5e-110 401.7 259 72.6
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 1.1e-109 401.4 539 41.4
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 3.0e-107 393.3 527 41.7
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.9e-101 374.0 429 51.0
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.7e-100 370.2 307 64.2
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.0e-91 340.1 401 51.1
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 3.4e-90 336.7 211 74.9
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 2.8e-84 317.0 299 53.5
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.6e-82 310.5 233 64.8
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.6e-76 291.2 456 38.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 9.2e-72 275.4 246 58.9
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 5.6e-53 213.0 246 44.3
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.3e-52 211.8 169 62.1
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 4.0e-51 206.8 473 30.7
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.9e-45 188.0 267 45.7
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.4e-43 181.0 209 50.2
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 2.9e-41 174.1 213 49.3
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 9.6e-37 159.1 188 50.0
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.4e-32 145.2 257 40.1
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 4.2e-32 143.7 171 47.4
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 9.3e-32 142.5 106 70.8
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.3e-30 137.9 199 41.2
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.6e-28 131.7 216 40.3
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 6.5e-25 119.8 167 41.9
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 3.2e-24 117.5 313 27.8
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.3e-20 105.5 202 35.6
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 6.9e-19 99.8 48 93.8
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.7e-17 95.1 103 47.6
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.2e-15 89.0 167 39.5
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 1.4e-14 85.5 127 36.2
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 3.9e-14 84.0 65 64.6
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.5e-13 82.0 39 89.7
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 6.3e-12 76.6 152 32.9
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.9e-10 70.1 111 36.9
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 8.5e-09 66.2 38 76.3
SGA_v2.0_scaffold711G53499 Striga asiatica HOM05D037478 ORTHO05D006867 6.7e-06 56.6 127 36.2


User provided reference genes

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