Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021577 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 2.3e-54 215.3 108 100.0
CSS0006548 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 3.8e-49 198.0 108 90.7
CSS0018174 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 4.9e-49 197.6 108 89.8
CSS0000012 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 2.4e-48 195.3 108 89.8
CSS0035995 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 2.3e-46 188.7 97 93.8
CSS0032028 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 3.1e-43 178.3 108 80.6
CSS0036674 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 3.1e-43 178.3 108 80.6
CsaV3_3G033630 Cucumis sativus L. HOM05D003802 ORTHO05D004829 4.0e-43 177.9 108 79.6
Dinv01494 Davidia involucrata HOM05D003802 ORTHO05D004829 1.5e-42 176.0 108 79.6
MELO3C009153.2 Cucumis melo HOM05D003802 ORTHO05D004829 2.0e-42 175.6 108 77.8
ClCG10G022250 Citrullus lanatus HOM05D003802 ORTHO05D004829 2.6e-42 175.3 108 77.8
Duzib093G0744 Durio zibethinus HOM05D003802 ORTHO05D004829 3.4e-42 174.9 108 78.7
SalBow5G2900 Salvia bowleyana HOM05D003802 ORTHO05D004829 5.8e-42 174.1 108 80.6
SalBow5G3730 Salvia bowleyana HOM05D003802 ORTHO05D004829 5.8e-42 174.1 108 80.6
Cc06_g01200 Coffea canephora HOM05D003802 ORTHO05D004829 7.6e-42 173.7 108 78.7
Sc07g0006670 Simmondsia chinensis HOM05D003802 ORTHO05D004829 1.0e-41 173.3 108 77.8
SalBow5G1244 Salvia bowleyana HOM05D003802 ORTHO05D004829 1.3e-41 172.9 108 78.7
TWI74G0069 Tripterygium wilfordii HOM05D003802 ORTHO05D004829 1.3e-41 172.9 108 78.7
MSTRG.5566 Avicennia marina HOM05D003802 ORTHO05D004829 2.2e-41 172.2 108 78.7
CSS0028267 Camellia sinensis var. sinensis HOM05D003802 ORTHO05D004829 2.9e-41 171.8 108 80.6
Duzib106G0050 Durio zibethinus HOM05D003802 ORTHO05D004829 2.9e-41 171.8 108 77.8
RcHm_v2.0_Chr3g0462821 Rosa chinensis HOM05D003802 ORTHO05D004829 2.9e-41 171.8 108 76.9
Thecc.05G013900 Theobroma cacao HOM05D003802 ORTHO05D004829 3.8e-41 171.4 108 77.8
Cfa017192 Carpinus fangiana HOM05D003802 ORTHO05D004829 4.9e-41 171.0 108 75.9
Nitab4.5_0000770g0030 Nicotiana tabacum HOM05D003802 ORTHO05D004829 4.9e-41 171.0 108 77.8
Cpa.g.sc11.100 Carica papaya HOM05D003802 ORTHO05D004829 6.5e-41 170.6 108 75.0
COL.COLO4_14514 Corchorus olitorius HOM05D003802 ORTHO05D004829 8.4e-41 170.2 108 77.8
Migut.J00147 Erythranthe guttata HOM05D003802 ORTHO05D004829 8.4e-41 170.2 108 76.9
Nitab4.5_0000119g0070 Nicotiana tabacum HOM05D003802 ORTHO05D004829 8.4e-41 170.2 107 77.6
GSVIVG01011175001 Vitis vinifera HOM05D003802 ORTHO05D004829 8.4e-41 170.2 108 77.8
Hma1.2p1_0362F.1_g136390 Hydrangea macrophylla HOM05D003802 ORTHO05D004829 1.1e-40 169.9 108 75.9
Sed0011339 Sechium edule HOM05D003802 ORTHO05D004829 1.1e-40 169.9 108 76.9
Dinv09291 Davidia involucrata HOM05D003802 ORTHO05D004829 1.4e-40 169.5 108 75.0
Nitab4.5_0004107g0050 Nicotiana tabacum HOM05D003802 ORTHO05D004829 1.4e-40 169.5 108 76.9
Peaxi162Scf00014g00222 Petunia axillaris HOM05D003802 ORTHO05D004829 1.4e-40 169.5 107 77.6
Haze_21019 Corylus avellana HOM05D003802 ORTHO05D004829 1.9e-40 169.1 108 75.0
FAN09G1187 Fragaria x ananassa HOM05D003802 ORTHO05D004829 1.9e-40 169.1 108 75.9
FAN09G3436 Fragaria x ananassa HOM05D003802 ORTHO05D004829 1.9e-40 169.1 108 75.9
FAN14G2331 Fragaria x ananassa HOM05D003802 ORTHO05D004829 1.9e-40 169.1 108 75.9
FAN14G4713 Fragaria x ananassa HOM05D003802 ORTHO05D004829 1.9e-40 169.1 108 75.9
CiPaw.10G157200 Carya illinoinensis HOM05D003802 ORTHO05D004829 2.5e-40 168.7 108 75.0
FvH4_6g11280 Fragaria vesca HOM05D003802 ORTHO05D004829 2.5e-40 168.7 108 75.0
QL07p035231 Quercus lobata HOM05D003802 ORTHO05D004829 3.2e-40 168.3 107 74.8
Eucgr.A00529 Eucalyptus grandis HOM05D003802 ORTHO05D004829 4.2e-40 167.9 108 74.1
Gohir.A13G085701 Gossypium hirsutum HOM05D003802 ORTHO05D004829 4.2e-40 167.9 108 74.1
Nn2g13152 Nelumbo nucifera HOM05D003802 ORTHO05D004829 4.2e-40 167.9 108 74.1
Peaxi162Scf00009g00163 Petunia axillaris HOM05D003802 ORTHO05D004829 4.2e-40 167.9 108 75.9
PGSC0003DMG401019176 Solanum tuberosum HOM05D003802 ORTHO05D004829 4.2e-40 167.9 108 76.9
Potri.006G101800 Populus trichocarpa HOM05D003802 ORTHO05D004829 5.5e-40 167.5 108 72.2
Solyc10g076600.2 Solanum lycopersicum HOM05D003802 ORTHO05D004829 5.5e-40 167.5 108 76.9
Solyc10g085200.2 Solanum lycopersicum HOM05D003802 ORTHO05D004829 5.5e-40 167.5 108 75.0
Sopen10g034670 Solanum pennellii HOM05D003802 ORTHO05D004829 5.5e-40 167.5 108 75.0
PGSC0003DMG400011023 Solanum tuberosum HOM05D003802 ORTHO05D004829 5.5e-40 167.5 108 75.0
TWI53G0442 Tripterygium wilfordii HOM05D003802 ORTHO05D004829 5.5e-40 167.5 108 78.7
Actinidia20743 Actinidia chinensis HOM05D003802 ORTHO05D004829 7.1e-40 167.2 108 75.0
Manes.08G093200 Manihot esculenta HOM05D003802 ORTHO05D004829 7.1e-40 167.2 108 72.2
Oeu038764.2 Olea europaea HOM05D003802 ORTHO05D004829 7.1e-40 167.2 108 74.1
Prupe.6G279200 Prunus persica HOM05D003802 ORTHO05D004829 9.3e-40 166.8 108 75.9
CAN.G243.8 Capsicum annuum HOM05D003802 ORTHO05D004829 1.6e-39 166.0 108 75.9
Glyma.03G056400 Glycine max HOM05D003802 ORTHO05D004829 1.6e-39 166.0 108 76.9
Atru.chr8.2601 Acer truncatum HOM05D003802 ORTHO05D004829 2.1e-39 165.6 107 73.8
FAN05G2463 Fragaria x ananassa HOM05D003802 ORTHO05D004829 2.1e-39 165.6 108 73.1
MBI03_g24259_MAGBIO Magnolia biondii HOM05D003802 ORTHO05D004829 2.1e-39 165.6 108 74.1
MD12G1169900 Malus domestica HOM05D003802 ORTHO05D004829 2.1e-39 165.6 108 75.0
Sabra16G0114200 Salix brachista HOM05D003802 ORTHO05D004829 2.1e-39 165.6 108 74.1
Sopen10g028240 Solanum pennellii HOM05D003802 ORTHO05D004829 2.1e-39 165.6 108 75.9
Aa31LG10G9050 Aethionema arabicum HOM05D003802 ORTHO05D004829 2.7e-39 165.2 108 76.9
CDE06G0316 Ceratophyllum demersum HOM05D003802 ORTHO05D004829 2.7e-39 165.2 108 75.0
TAR369G0012 Trochodendron aralioides HOM05D003802 ORTHO05D004829 3.5e-39 164.9 108 73.1
Aqoxy4G02528 Aquilegia oxysepala HOM05D003802 ORTHO05D004829 4.6e-39 164.5 108 70.4
CAN.G823.1 Capsicum annuum HOM05D003802 ORTHO05D004829 4.6e-39 164.5 108 75.0
Rhsim04G0127300 Rhododendron simsii HOM05D003802 ORTHO05D004829 6.0e-39 164.1 108 73.1
BcaB01g00473 Brassica carinata HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
A09p44980 Brassica napus HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
C08p27060 Brassica napus HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
BolC8t50321H Brassica oleracea HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
BraA09t39958Z Brassica rapa HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
Gohir.A09G166000 Gossypium hirsutum HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
Gohir.D09G161600 Gossypium hirsutum HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 74.1
Lj3g0007770 Lotus japonicus HOM05D003802 ORTHO05D004829 7.9e-39 163.7 108 75.9
Sp5g10430 Schrenkiella parvula HOM05D003802 ORTHO05D004829 1.0e-38 163.3 108 75.0
CARHR161470 Cardamine hirsuta HOM05D003802 ORTHO05D004829 1.3e-38 162.9 108 75.0
Glyma.07G151500 Glycine max HOM05D003802 ORTHO05D004829 1.3e-38 162.9 108 74.1
Gorai.006G183300 Gossypium raimondii HOM05D003802 ORTHO05D004829 1.3e-38 162.9 108 74.1
Lj1g0026208 Lotus japonicus HOM05D003802 ORTHO05D004829 1.3e-38 162.9 108 73.1
unitig_736.g22759 Utricularia gibba HOM05D003802 ORTHO05D004829 1.3e-38 162.9 111 75.7
AT3G51840 Arabidopsis thaliana HOM05D003802 ORTHO05D004829 2.3e-38 162.2 108 75.0
Gorai.001G247400 Gossypium raimondii HOM05D003802 ORTHO05D004829 2.3e-38 162.2 108 71.3
MD04G1155700 Malus domestica HOM05D003802 ORTHO05D004829 2.3e-38 162.2 108 72.2
Phvul.010G076000 Phaseolus vulgaris HOM05D003802 ORTHO05D004829 2.3e-38 162.2 108 74.1
ATR0681G264 Amborella trichopoda HOM05D003802 ORTHO05D004829 3.0e-38 161.8 108 72.2
AUR62030803 Chenopodium quinoa HOM05D003802 ORTHO05D004829 5.1e-38 161.0 108 75.0
Gohir.D13G095300 Gossypium hirsutum HOM05D003802 ORTHO05D004829 5.1e-38 161.0 108 70.4
HanXRQChr11g0331731 Helianthus annuus HOM05D003802 ORTHO05D004829 5.1e-38 161.0 109 74.3
TPR.G8416 Trifolium pratense HOM05D003802 ORTHO05D004829 5.1e-38 161.0 108 73.1
BcaB01g00413 Brassica carinata HOM05D003802 ORTHO05D004829 6.7e-38 160.6 108 74.1
Medtr7g068850 Medicago truncatula HOM05D003802 ORTHO05D004829 6.7e-38 160.6 108 73.1
AL5G32300 Arabidopsis lyrata HOM05D003802 ORTHO05D004829 8.7e-38 160.2 108 73.1
PSO384G3434 Papaver somniferum HOM05D003802 ORTHO05D004829 8.7e-38 160.2 97 75.3
THA.LOC104805957 Tarenaya hassleriana HOM05D003802 ORTHO05D004829 1.1e-37 159.8 97 76.3
DCAR_015400 Daucus carota HOM05D003802 ORTHO05D004829 1.5e-37 159.5 99 74.7
Lalb_Chr12g0207031 Lupinus albus HOM05D003802 ORTHO05D004829 1.5e-37 159.5 108 74.1
Aa31LG5G23700 Aethionema arabicum HOM05D003802 ORTHO05D004829 1.9e-37 159.1 108 72.2
CiPaw.09G210700 Carya illinoinensis HOM05D003802 ORTHO05D004829 1.9e-37 159.1 108 71.3
Os05g0163700 Oryza sativa ssp. japonica HOM05D003802 ORTHO05D004829 1.9e-37 159.1 108 74.1
ECA236G0063 Erigeron canadensis HOM05D003802 ORTHO05D004829 2.5e-37 158.7 108 74.1
vmacro08883 Vaccinium macrocarpon HOM05D003802 ORTHO05D004829 2.5e-37 158.7 119 68.9
Ah.12g058740 Amaranthus hybridus HOM05D003802 ORTHO05D004829 4.3e-37 157.9 108 73.1
Lalb_Chr03g0043201 Lupinus albus HOM05D003802 ORTHO05D004829 4.3e-37 157.9 100 74.0
PGR031G1102 Punica granatum HOM05D003802 ORTHO05D004829 4.3e-37 157.9 109 70.6
PSO339G3660 Papaver somniferum HOM05D003802 ORTHO05D004829 5.7e-37 157.5 97 74.2
arahy.Tifrunner.gnm1.ann1.0003EL Arachis hypogaea HOM05D003802 ORTHO05D004829 7.4e-37 157.1 108 69.4
arahy.Tifrunner.gnm1.ann1.DW8YXR Arachis hypogaea HOM05D003802 ORTHO05D004829 7.4e-37 157.1 108 69.4
BcaB02g08601 Brassica carinata HOM05D003802 ORTHO05D004829 7.4e-37 157.1 108 71.3
Thhalv10010388m.g Eutrema salsugineum HOM05D003802 ORTHO05D004829 7.4e-37 157.1 97 76.3
HPP92_006763 Vanilla planifolia HOM05D003802 ORTHO05D004829 7.4e-37 157.1 108 71.3
Lsat_1_v5_gn_8_101681 Lactuca sativa HOM05D003802 ORTHO05D004829 9.7e-37 156.8 97 78.4
Hund10994 Selenicereus undatus HOM05D003802 ORTHO05D004829 1.3e-36 156.4 114 71.1
BcaC02g09302 Brassica carinata HOM05D003802 ORTHO05D004829 1.6e-36 156.0 108 70.4
A04p07490 Brassica napus HOM05D003802 ORTHO05D004829 1.6e-36 156.0 108 70.4
C04p41140 Brassica napus HOM05D003802 ORTHO05D004829 1.6e-36 156.0 108 70.4
BolC4t25697H Brassica oleracea HOM05D003802 ORTHO05D004829 1.6e-36 156.0 108 70.4
BraA04t16444Z Brassica rapa HOM05D003802 ORTHO05D004829 1.6e-36 156.0 108 70.4
Os01g0159400 Oryza sativa ssp. japonica HOM05D003802 ORTHO05D004829 2.8e-36 155.2 103 72.8
Carub.0005s1819 Capsella rubella HOM05D003802 ORTHO05D004829 4.8e-36 154.5 108 70.4
EL10Ac5g12547 Beta vulgaris HOM05D003802 ORTHO05D004829 1.1e-35 153.3 91 78.0
AagrBONN_evm.TU.Sc2ySwM_228.349 Anthoceros agrestis HOM05D003802 ORTHO05D004829 2.4e-35 152.1 97 74.2
Ciclev10013617m.g Citrus clementina HOM05D003802 ORTHO05D004829 2.4e-35 152.1 108 65.7
Zm00001eb282120 Zea mays HOM05D003802 ORTHO05D004829 4.1e-35 151.4 108 69.4
SMO118G0494 Selaginella moellendorffii HOM05D003802 ORTHO05D004829 6.9e-35 150.6 97 75.3
SEGI_03618 Sequoiadendron giganteum HOM05D003802 ORTHO05D004829 1.2e-34 149.8 97 73.2
MD12G1170700 Malus domestica HOM05D003802 ORTHO05D004829 4.5e-34 147.9 100 70.0
VMungo0331G1951 Vigna mungo HOM05D003802 ORTHO05D004829 1.0e-33 146.7 96 72.9
Pp3c3_8340 Physcomitrium patens HOM05D003802 ORTHO05D004829 1.3e-33 146.4 97 71.1
Os06g0347100 Oryza sativa ssp. japonica HOM05D003802 ORTHO05D004829 1.1e-32 143.3 97 70.1
Mapoly0037s0018 Marchantia polymorpha HOM05D003802 ORTHO05D004829 7.2e-32 140.6 106 64.2
CBR_g4340 Chara braunii HOM05D003802 ORTHO05D004829 8.8e-30 133.7 97 63.9
Os06g0346300 Oryza sativa ssp. japonica HOM05D003802 ORTHO05D004829 1.4e-27 126.3 93 63.4
Cre16.g695100 Chlamydomonas reinhardtii HOM05D003802 ORTHO05D004829 5.3e-27 124.4 100 64.0
Zm00001eb123620 Zea mays HOM05D003802 ORTHO05D004829 4.5e-26 121.3 78 73.1
Ciclev10013381m.g Citrus clementina HOM05D003802 ORTHO05D004829 1.9e-24 115.9 74 74.3
SHI15900 Sapria himalayana HOM05D003802 ORTHO05D000001 1.9e-24 115.9 86 65.1
Lj3C951G1 Lonicera japonica HOM05D003802 ORTHO05D004829 3.9e-22 108.2 64 79.7
Lj3C950G12 Lonicera japonica HOM05D003802 ORTHO05D004829 1.1e-21 106.7 108 53.7
SGA_v2.0_scaffold95G28857 Striga asiatica HOM05D003802 ORTHO05D004829 2.6e-18 95.5 108 50.0
Atru.chr8.2666 Acer truncatum HOM05D003802 ORTHO05D004829 4.8e-12 74.7 49 73.5
Atru.chr8.2592 Acer truncatum HOM05D003802 ORTHO05D004829 1.4e-11 73.2 45 77.8
Nn2g10872 Nelumbo nucifera HOM05D003802 ORTHO05D020190 1.4e-11 73.2 47 72.3
Ciclev10011934m.g Citrus clementina HOM05D003802 ORTHO05D004829 1.6e-10 69.7 44 72.7
VMungo1325G0002 Vigna mungo HOM05D003802 ORTHO05D006464 5.2e-06 54.7 99 33.3


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