Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021423 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D109266 7.3e-32 139.8 65 100.0
CSS0040163 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D001997 4.8e-07 57.4 35 74.3
CSS0003571 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
CSS0018416 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Cc02_g22240 Coffea canephora HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Dinv19349 Davidia involucrata HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Dinv24259 Davidia involucrata HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Lj9C240G9 Lonicera japonica HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Oeu032644.1 Olea europaea HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Oeu064616.1 Olea europaea HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Rhsim08G0226500 Rhododendron simsii HOM05D000347 ORTHO05D001997 2.4e-06 55.1 49 53.1
Manes.05G060600 Manihot esculenta HOM05D000347 ORTHO05D001997 3.1e-06 54.7 49 53.1
Oeu039106.1 Olea europaea HOM05D000347 ORTHO05D001997 4.1e-06 54.3 49 53.1
Potri.002G216200 Populus trichocarpa HOM05D000347 ORTHO05D001997 5.3e-06 53.9 49 51.0
Potri.014G179700 Populus trichocarpa HOM05D000347 ORTHO05D001997 5.3e-06 53.9 49 51.0
Sabra02G0168500 Salix brachista HOM05D000347 ORTHO05D001997 5.3e-06 53.9 49 51.0
vmacro19903 Vaccinium macrocarpon HOM05D000347 ORTHO05D001997 5.3e-06 53.9 49 51.0
Actinidia39058 Actinidia chinensis HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Ah.11g043720 Amaranthus hybridus HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
EL10Ac2g03733 Beta vulgaris HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
CSS0013040 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
CAN.G1352.19 Capsicum annuum HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
HanXRQChr01g0021821 Helianthus annuus HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 53.1
Hma1.2p1_0557F.1_g178310 Hydrangea macrophylla HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Hma1.2p1_2850F.1_g329410 Hydrangea macrophylla HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Nitab4.5_0004005g0020 Nicotiana tabacum HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Nitab4.5_0005539g0030 Nicotiana tabacum HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Peaxi162Scf00011g00030 Petunia axillaris HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Solyc01g104510.3 Solanum lycopersicum HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Sopen01g047010 Solanum pennellii HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
PGSC0003DMG400023743 Solanum tuberosum HOM05D000347 ORTHO05D001997 6.9e-06 53.5 49 51.0
Sabra14G0137900 Salix brachista HOM05D000347 ORTHO05D001997 9.0e-06 53.1 49 51.0
Sabra14G0140000 Salix brachista HOM05D000347 ORTHO05D001997 9.0e-06 53.1 49 51.0


User provided reference genes

Program Settings