Gene: PGSC0003DMG400023743

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400023743
  • Transcript Identifier PGSC0003DMT400061016
  • Gene Type Coding gene
  • Location ST4.03ch01 : 81263269-81268023 : negative

Gene Family Information

  • ID HOM05D000347
  • #Genes/#Species 1366/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37435821
  • id PGSC0003DMG400023743.v4.03
  • uniprot M1C6W9

Descriptions

  • Description WD-40 repeat-containing protein MSI1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000653
IEA
GOA Databaseregulation of genetic imprinting
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development AT5G58230
GO:0031507
IEA
GOA Databaseheterochromatin assembly
GO:0006349
IEA
GOA Databaseregulation of gene expression by genetic imprinting
GO:0010214
IEA
GOA Databaseseed coat development
GO:0010026
IEA
GOA Databasetrichome differentiation
GO:0009909
IEA
GOA Databaseregulation of flower development
GO:0009793
IEA
GOA Databaseembryo development ending in seed dormancy
GO:0009555
IEA
GOA Databasepollen development
GO:0048366
IEA
GOA Databaseleaf development
GO:0048316
IEA
GOA Databaseseed development
GO:0045787
IEA
GOA Databasepositive regulation of cell cycle
GO:0070828
IEA
GOA Databaseheterochromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005677
IEA
GOA Databasechromatin silencing complex
GO:0032991
IEA
GOA Databaseprotein-containing complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR022052 Histone-binding protein RBBP4, N-terminal
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
12.2.1.3 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1c/MSI
12.3.3.2.1.1.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component MSI1