Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 0.0e+00 1200.3 613 100.0
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 2.0e-240 835.9 592 74.2
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 6.1e-237 824.3 592 73.6
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.7e-231 806.2 582 73.4
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 8.0e-229 797.3 587 72.1
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 2.3e-228 795.8 587 70.0
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 5.9e-224 781.2 592 69.4
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 6.8e-212 741.1 586 65.0
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 2.6e-211 739.2 592 63.9
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 3.4e-203 712.2 586 63.8
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 3.2e-201 705.7 578 64.9
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 4.1e-201 705.3 590 62.7
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 3.5e-200 702.2 592 64.4
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 6.6e-199 698.0 595 62.0
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 1.2e-197 693.7 589 61.8
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 1.8e-196 689.9 585 61.0
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 4.9e-194 681.8 595 61.8
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 1.9e-193 679.9 581 62.0
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 5.4e-193 678.3 594 60.6
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.2e-192 677.2 595 61.7
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 1.3e-191 673.7 587 61.7
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 2.3e-191 672.9 582 61.5
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.1e-190 670.6 575 62.3
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 1.5e-190 670.2 580 62.1
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 7.3e-190 667.9 594 61.4
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 7.3e-190 667.9 605 59.3
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 7.3e-190 667.9 572 63.5
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 4.7e-189 665.2 582 60.7
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 2.0e-187 659.8 595 61.0
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 9.9e-187 657.5 592 60.0
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 1.3e-186 657.1 591 58.5
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 3.8e-186 655.6 564 61.7
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 5.4e-185 651.7 572 60.7
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 1.2e-184 650.6 569 60.5
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 1.6e-184 650.2 584 60.8
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 3.0e-183 646.0 565 61.8
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 5.1e-183 645.2 573 59.9
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 2.1e-181 639.8 606 57.9
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 3.6e-181 639.0 552 60.1
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 5.8e-179 631.7 572 60.0
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 4.2e-177 625.5 584 58.0
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 9.3e-177 624.4 567 60.1
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 3.5e-176 622.5 584 57.5
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 7.9e-176 621.3 607 57.7
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 1.3e-175 620.5 579 56.8
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 5.1e-175 618.6 547 59.2
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 7.3e-174 614.8 536 59.1
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 9.6e-174 614.4 590 58.1
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 1.8e-172 610.1 536 59.0
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 2.4e-172 609.8 574 57.0
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 5.3e-172 608.6 567 59.3
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 1.2e-171 607.4 558 59.3
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 2.0e-171 606.7 584 56.3
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 2.6e-171 606.3 547 58.1
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 4.5e-171 605.5 583 58.0
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 4.5e-171 605.5 583 58.0
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 7.6e-171 604.7 589 57.9
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 1.3e-170 604.0 595 55.0
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 2.4e-169 599.7 576 54.5
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 7.1e-169 598.2 635 52.1
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 9.3e-169 597.8 574 56.1
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 1.6e-168 597.0 612 53.8
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 1.0e-167 594.3 620 52.9
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 3.0e-167 592.8 578 55.5
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.1e-166 590.9 574 56.6
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 3.7e-165 585.9 584 54.1
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 2.2e-162 576.6 579 55.1
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 2.2e-162 576.6 576 54.0
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 4.9e-162 575.5 584 52.7
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 6.5e-162 575.1 576 53.5
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.6e-160 570.5 583 54.0
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 2.7e-160 569.7 574 56.1
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 8.7e-159 564.7 573 55.3
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.3e-158 562.8 562 55.9
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 9.6e-158 561.2 556 55.6
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 2.8e-157 559.7 555 55.7
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 6.3e-157 558.5 555 55.5
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.1e-156 557.8 566 55.3
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 2.9e-154 549.7 567 54.3
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 4.3e-150 535.8 561 54.2
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 5.7e-142 508.8 588 51.7
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 4.7e-136 489.2 553 53.0
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 3.3e-134 483.0 559 52.2
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 1.7e-133 480.7 560 52.1
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 1.7e-133 480.7 560 52.1
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 2.2e-133 480.3 665 43.5
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 1.1e-132 478.0 560 52.1
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 8.5e-130 468.4 601 45.4
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 4.7e-128 462.6 497 50.9
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 4.2e-121 439.5 573 46.8
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 1.7e-117 427.6 570 45.3
AL2G26020 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.2e-117 427.2 548 46.7
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 9.1e-116 421.8 593 44.9
SEGI_05754 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 7.5e-102 375.6 621 39.6
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 8.3e-101 372.1 577 44.9
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 2.4e-100 370.5 321 61.7
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.1e-97 361.7 400 50.8
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 1.9e-97 360.9 321 61.1
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 3.3e-97 360.1 563 41.2
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 1.6e-96 357.8 342 59.4
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 6.4e-93 345.9 307 61.6
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 5.1e-82 309.7 552 36.6
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 6.6e-82 309.3 270 60.0
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 1.7e-77 294.7 584 35.1
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 5.4e-76 289.7 544 35.3
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 6.2e-72 276.2 202 67.3
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 4.2e-68 263.5 527 37.0
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 1.8e-58 231.5 484 34.1
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 4.9e-53 213.4 184 62.5
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 2.4e-52 211.1 192 60.9
CBR_g48672 Chara braunii HOM05D003876 ORTHO05D004560 4.3e-41 173.7 605 26.4
Os04g0625350 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 1.0e-34 152.5 168 47.0
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 9.7e-25 119.4 127 51.2
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 1.5e-22 112.1 175 39.4
HPP92_009518 Vanilla planifolia HOM05D003876 ORTHO05D004560 7.9e-19 99.8 136 42.6
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 3.9e-18 97.4 187 38.5
SEGI_19037 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 1.8e-15 88.6 188 35.6
Cre02.g074300 Chlamydomonas reinhardtii HOM05D003876 ORTHO05D004560 5.9e-14 83.6 426 20.9
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 2.6e-09 68.2 263 25.5
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 4.4e-09 67.4 263 25.5
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 4.4e-09 67.4 53 62.3
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 2.8e-08 64.7 70 48.6
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 2.0e-06 58.5 42 66.7
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 2.0e-06 58.5 52 57.7


User provided reference genes

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