Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021173 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 3.1e-57 224.9 115 100.0
CSS0011496 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 2.8e-42 175.3 92 98.9
Dinv07137 Davidia involucrata HOM05D002336 ORTHO05D002526 7.4e-27 124.0 102 68.6
Hma1.2p1_0394F.1_g143540 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 2.8e-26 122.1 102 66.7
Rhsim13G0138400 Rhododendron simsii HOM05D002336 ORTHO05D002526 6.5e-23 110.9 101 66.3
COL.COLO4_31953 Corchorus olitorius HOM05D002336 ORTHO05D002526 6.7e-20 100.9 99 61.6
Thecc.06G242900 Theobroma cacao HOM05D002336 ORTHO05D002526 2.2e-18 95.9 109 56.0
Duzib235G0330 Durio zibethinus HOM05D002336 ORTHO05D002526 1.1e-17 93.6 123 51.2
vmacro03592 Vaccinium macrocarpon HOM05D002336 ORTHO05D002526 9.0e-17 90.5 80 62.5
MD10G1340900 Malus domestica HOM05D002336 ORTHO05D002526 4.5e-16 88.2 100 55.0
Cc09_g00160 Coffea canephora HOM05D002336 ORTHO05D002526 1.0e-15 87.0 93 55.9
MD05G1363300 Malus domestica HOM05D002336 ORTHO05D002526 1.3e-15 86.7 100 56.0
Actinidia02276 Actinidia chinensis HOM05D002336 ORTHO05D002526 1.7e-15 86.3 78 65.4
Prupe.4G002300 Prunus persica HOM05D002336 ORTHO05D002526 3.8e-15 85.1 108 54.6
Solyc04g015180.3 Solanum lycopersicum HOM05D002336 ORTHO05D002526 1.4e-14 83.2 111 52.3
Gohir.A06G157300 Gossypium hirsutum HOM05D002336 ORTHO05D002526 3.2e-14 82.0 101 57.4
Gohir.D06G163600 Gossypium hirsutum HOM05D002336 ORTHO05D002526 3.2e-14 82.0 101 57.4
Gorai.010G190700 Gossypium raimondii HOM05D002336 ORTHO05D002526 3.2e-14 82.0 101 57.4
Rhsim08G0216900 Rhododendron simsii HOM05D002659 ORTHO05D002526 9.4e-14 80.5 77 63.6
Nitab4.5_0010199g0060 Nicotiana tabacum HOM05D002336 ORTHO05D002526 1.2e-13 80.1 111 51.4
GSVIVG01003467001 Vitis vinifera HOM05D002336 ORTHO05D002526 1.6e-13 79.7 105 51.4
Sopen04g007220 Solanum pennellii HOM05D002336 ORTHO05D002526 2.1e-13 79.3 111 51.4
Cfa000015 Carpinus fangiana HOM05D002336 ORTHO05D002526 7.9e-13 77.4 106 50.9
Manes.09G085000 Manihot esculenta HOM05D002336 ORTHO05D002526 5.1e-12 74.7 101 54.5
CiPaw.10G083700 Carya illinoinensis HOM05D002336 ORTHO05D002526 1.5e-11 73.2 106 50.9
VMungo0540G1254 Vigna mungo HOM05D002336 ORTHO05D002526 3.3e-11 72.0 96 53.1
Cpa.g.sc27.205 Carica papaya HOM05D002336 ORTHO05D002526 4.3e-11 71.6 95 53.7
Atru.chr1.2178 Acer truncatum HOM05D002336 ORTHO05D002526 1.3e-10 70.1 100 54.0
CsaV3_6G048110 Cucumis sativus L. HOM05D002336 ORTHO05D002526 2.2e-10 69.3 106 47.2
ClCG01G021110 Citrullus lanatus HOM05D002336 ORTHO05D002526 2.8e-10 68.9 106 48.1
Ciclev10016499m.g Citrus clementina HOM05D002336 ORTHO05D002526 2.8e-10 68.9 84 56.0
Psat1g171880 Pisum sativum HOM05D002336 ORTHO05D002526 2.8e-10 68.9 93 50.5
QL05p066607 Quercus lobata HOM05D002336 ORTHO05D002526 2.8e-10 68.9 79 57.0
MELO3C007997.2 Cucumis melo HOM05D002336 ORTHO05D002526 3.7e-10 68.6 106 47.2
Peaxi162Scf00811g00442 Petunia axillaris HOM05D002336 ORTHO05D002526 1.1e-09 67.0 101 47.5
CANSAT56G2025 Cannabis sativa HOM05D002336 ORTHO05D002526 9.1e-09 63.9 114 45.6
Duzib235G1184 Durio zibethinus HOM05D002336 ORTHO05D002526 9.1e-09 63.9 70 54.3
Eucgr.D00945 Eucalyptus grandis HOM05D002336 ORTHO05D002526 9.1e-09 63.9 107 46.7
Ca_00777_v3 Cicer arietinum L. HOM05D000491 ORTHO05D000359 1.2e-08 63.5 93 49.5
Sed0019231 Sechium edule HOM05D002336 ORTHO05D002526 1.2e-08 63.5 131 39.7
PGR004G0111 Punica granatum HOM05D002336 ORTHO05D002526 1.5e-08 63.2 107 45.8
Hund21625 Selenicereus undatus HOM05D002336 ORTHO05D002526 4.5e-08 61.6 78 52.6
Lalb_Chr20g0119621 Lupinus albus HOM05D002336 ORTHO05D002526 1.7e-07 59.7 82 46.3
arahy.Tifrunner.gnm1.ann1.7YIN9J Arachis hypogaea HOM05D002336 ORTHO05D002526 2.2e-07 59.3 87 52.9
arahy.Tifrunner.gnm1.ann1.WK75UE Arachis hypogaea HOM05D002336 ORTHO05D002526 2.2e-07 59.3 87 52.9
Glyma.09G016100 Glycine max HOM05D002336 ORTHO05D002526 2.2e-07 59.3 95 46.3
Phvul.006G135800 Phaseolus vulgaris HOM05D002336 ORTHO05D002526 2.2e-07 59.3 96 46.9
Medtr2g027530 Medicago truncatula HOM05D002336 ORTHO05D002526 3.8e-07 58.5 93 47.3
Glyma.15G121800 Glycine max HOM05D002336 ORTHO05D002526 6.5e-07 57.8 95 47.4
MSTRG.16067 Avicennia marina HOM05D002336 ORTHO05D002526 1.4e-06 56.6 98 44.9
CAN.G1456.5 Capsicum annuum HOM05D002336 ORTHO05D002526 2.5e-06 55.8 110 45.5
AUR62014931 Chenopodium quinoa HOM05D002336 ORTHO05D002526 2.5e-06 55.8 93 47.3
AUR62015177 Chenopodium quinoa HOM05D002336 ORTHO05D002526 2.5e-06 55.8 93 47.3
QL03p035757 Quercus lobata HOM05D002336 ORTHO05D002526 2.5e-06 55.8 80 47.5
Sabra16G0008400 Salix brachista HOM05D000456 ORTHO05D000887 4.2e-06 55.1 100 45.0
Potri.016G003200 Populus trichocarpa HOM05D002336 ORTHO05D002526 7.2e-06 54.3 100 43.0


User provided reference genes

Program Settings