Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020931 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 9.5e-95 350.1 173 100.0
CSS0029670 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 1.6e-78 296.2 160 90.6
CSS0002019 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 2.4e-74 282.3 151 91.4
RhsimUnG0006400 Rhododendron simsii HOM05D005949 ORTHO05D006945 2.4e-69 265.8 160 77.5
RhsimUnG0087200 Rhododendron simsii HOM05D005949 ORTHO05D006945 2.4e-69 265.8 160 77.5
Dinv25719 Davidia involucrata HOM05D005949 ORTHO05D006945 3.2e-66 255.4 160 78.1
GSVIVG01032367001 Vitis vinifera HOM05D005949 ORTHO05D006945 4.2e-66 255.0 160 76.2
Atru.chr6.2442 Acer truncatum HOM05D005949 ORTHO05D006945 3.5e-65 251.9 159 74.8
TAR374G0398 Trochodendron aralioides HOM05D005949 ORTHO05D006945 1.5e-63 246.5 160 74.4
Nn2g12389 Nelumbo nucifera HOM05D005949 ORTHO05D006945 1.4e-61 240.0 159 73.0
Eucgr.J02262 Eucalyptus grandis HOM05D005949 ORTHO05D006945 1.8e-61 239.6 160 71.2
HanXRQChr15g0486811 Helianthus annuus HOM05D005949 ORTHO05D006945 3.1e-61 238.8 159 69.8
Sc09g0007150 Simmondsia chinensis HOM05D005949 ORTHO05D006945 3.1e-61 238.8 164 68.9
CAN.G1235.24 Capsicum annuum HOM05D005949 ORTHO05D006945 2.0e-60 236.1 160 70.0
Lj7C602T3 Lonicera japonica HOM05D005949 ORTHO05D006945 3.4e-60 235.3 188 64.4
Nitab4.5_0001562g0070 Nicotiana tabacum HOM05D005949 ORTHO05D006945 3.4e-60 235.3 160 69.4
Nitab4.5_0006683g0100 Nicotiana tabacum HOM05D005949 ORTHO05D006945 3.4e-60 235.3 160 70.0
TWI12G1469 Tripterygium wilfordii HOM05D005949 ORTHO05D006945 3.4e-60 235.3 159 69.8
MSTRG.15541 Avicennia marina HOM05D005949 ORTHO05D006945 5.8e-60 234.6 159 68.6
Cfa007328 Carpinus fangiana HOM05D005949 ORTHO05D006945 5.8e-60 234.6 162 69.8
Actinidia36133 Actinidia chinensis HOM05D005949 ORTHO05D006945 1.0e-59 233.8 140 80.0
Migut.K01417 Erythranthe guttata HOM05D005949 ORTHO05D006945 1.1e-58 230.3 160 68.8
Manes.17G110300 Manihot esculenta HOM05D005949 ORTHO05D006945 1.9e-58 229.6 159 68.6
SHI03792 Sapria himalayana HOM05D005949 ORTHO05D006945 3.2e-58 228.8 159 67.3
MELO3C026595.2 Cucumis melo HOM05D005949 ORTHO05D006945 5.5e-58 228.0 159 66.7
Ciclev10015245m.g Citrus clementina HOM05D005949 ORTHO05D006945 1.2e-57 226.9 159 68.6
Lsat_1_v5_gn_4_184520 Lactuca sativa HOM05D005949 ORTHO05D006945 3.5e-57 225.3 159 66.7
SGA_v2.0_scaffold47G17523 Striga asiatica HOM05D005949 ORTHO05D006945 4.6e-57 224.9 162 67.3
CsaV3_3G042930 Cucumis sativus L. HOM05D000631 ORTHO05D000524 6.0e-57 224.6 159 65.4
PGSC0003DMG400018653 Solanum tuberosum HOM05D005949 ORTHO05D006945 7.9e-57 224.2 160 69.4
unitig_88.g27782 Utricularia gibba HOM05D005949 ORTHO05D006945 7.9e-57 224.2 159 66.0
Solyc01g112020.3 Solanum lycopersicum HOM05D005949 ORTHO05D006945 1.0e-56 223.8 160 68.8
Sopen01g054070 Solanum pennellii HOM05D005949 ORTHO05D006945 1.8e-56 223.0 160 68.8
CiPaw.03G046600 Carya illinoinensis HOM05D005949 ORTHO05D006945 2.3e-56 222.6 160 67.5
MD09G1021300 Malus domestica HOM05D005949 ORTHO05D006945 2.3e-56 222.6 161 66.5
Haze_14768 Corylus avellana HOM05D005949 ORTHO05D006945 3.0e-56 222.2 173 65.3
QL02p073821 Quercus lobata HOM05D005949 ORTHO05D006945 6.7e-56 221.1 159 66.0
ECA232G4961 Erigeron canadensis HOM05D005949 ORTHO05D006945 8.7e-56 220.7 151 66.9
Lj2g0004695 Lotus japonicus HOM05D005949 ORTHO05D006945 8.7e-56 220.7 160 64.4
Sed0011104 Sechium edule HOM05D005949 ORTHO05D006945 8.7e-56 220.7 159 66.0
MD17G1021300 Malus domestica HOM05D005949 ORTHO05D006945 1.1e-55 220.3 159 67.3
AUR62028447 Chenopodium quinoa HOM05D005949 ORTHO05D006945 9.6e-55 217.2 160 64.4
AUR62043287 Chenopodium quinoa HOM05D005949 ORTHO05D006945 3.7e-54 215.3 160 63.8
ClCG10G013730 Citrullus lanatus HOM05D005949 ORTHO05D006945 4.8e-54 214.9 159 64.2
CANSAT64G2213 Cannabis sativa HOM05D005949 ORTHO05D006945 8.2e-54 214.2 161 61.5
Gohir.D10G085800 Gossypium hirsutum HOM05D005949 ORTHO05D006945 4.1e-53 211.8 159 66.0
Potri.001G341400 Populus trichocarpa HOM05D005949 ORTHO05D006945 4.1e-53 211.8 155 65.2
Aqoxy5G03678 Aquilegia oxysepala HOM05D005949 ORTHO05D006945 6.9e-53 211.1 160 64.4
Gorai.011G094000 Gossypium raimondii HOM05D005949 ORTHO05D006945 6.9e-53 211.1 159 66.0
Duzib264G1167 Durio zibethinus HOM05D005949 ORTHO05D006945 1.5e-52 209.9 159 64.8
Gohir.A10G101600 Gossypium hirsutum HOM05D005949 ORTHO05D006945 2.6e-52 209.1 158 65.8
Cc09_g05780 Coffea canephora HOM05D005949 ORTHO05D006945 5.8e-52 208.0 152 63.8
Glyma.19G052100 Glycine max HOM05D005949 ORTHO05D006945 5.8e-52 208.0 160 60.0
Thecc.04G021200 Theobroma cacao HOM05D005949 ORTHO05D006945 5.8e-52 208.0 155 65.2
RcHm_v2.0_Chr2g0173461 Rosa chinensis HOM05D005949 ORTHO05D006945 7.6e-52 207.6 159 62.9
Sabra16G0221400 Salix brachista HOM05D005949 ORTHO05D006945 1.3e-51 206.8 155 63.2
arahy.Tifrunner.gnm1.ann1.BK7H4N Arachis hypogaea HOM05D005949 ORTHO05D006945 1.7e-51 206.5 160 61.9
Prupe.3G295200 Prunus persica HOM05D005949 ORTHO05D006945 2.9e-51 205.7 160 65.0
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 3.8e-51 205.3 159 63.5
ATR0199G040 Amborella trichopoda HOM05D005949 ORTHO05D006945 5.0e-51 204.9 151 62.3
FAN09G2334 Fragaria x ananassa HOM05D005949 ORTHO05D006945 5.0e-51 204.9 159 61.6
FAN05G2654 Fragaria x ananassa HOM05D005949 ORTHO05D006945 6.5e-51 204.5 164 59.8
Glyma.05G115200 Glycine max HOM05D005949 ORTHO05D006945 6.5e-51 204.5 160 59.4
Phvul.004G060400 Phaseolus vulgaris HOM05D005949 ORTHO05D006945 6.5e-51 204.5 160 58.1
PGR083G1217 Punica granatum HOM05D005949 ORTHO05D006945 6.5e-51 204.5 156 63.5
FvH4_6g51990 Fragaria vesca HOM05D005949 ORTHO05D006945 1.1e-50 203.8 159 61.6
FAN02G3213 Fragaria x ananassa HOM05D005949 ORTHO05D006945 1.1e-50 203.8 159 61.6
FAN14G1023 Fragaria x ananassa HOM05D005949 ORTHO05D006945 2.5e-50 202.6 159 61.6
THA.LOC104819734 Tarenaya hassleriana HOM05D005949 ORTHO05D006945 2.5e-50 202.6 159 61.0
DCAR_021740 Daucus carota HOM05D005949 ORTHO05D006945 4.2e-50 201.8 162 63.0
arahy.Tifrunner.gnm1.ann1.4A4JE9 Arachis hypogaea HOM05D005949 ORTHO05D006945 9.3e-50 200.7 160 60.0
Ca_04380_v3 Cicer arietinum L. HOM05D005949 ORTHO05D006945 1.6e-49 199.9 160 57.5
vmacro05885 Vaccinium macrocarpon HOM05D005949 ORTHO05D006945 4.6e-49 198.4 147 68.0
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 6.1e-49 198.0 160 56.9
Lalb_Chr06g0174481 Lupinus albus HOM05D005949 ORTHO05D006945 1.3e-48 196.8 161 59.6
Medtr6g021740 Medicago truncatula HOM05D005949 ORTHO05D006945 3.0e-48 195.7 160 56.9
HPP92_016937 Vanilla planifolia HOM05D005949 ORTHO05D006945 5.1e-48 194.9 160 61.9
Psat5g064960 Pisum sativum HOM05D005949 ORTHO05D006945 6.7e-48 194.5 160 57.5
TPR.G16864 Trifolium pratense HOM05D005949 ORTHO05D006945 2.5e-47 192.6 160 56.9
TPR.G8694 Trifolium pratense HOM05D005949 ORTHO05D006945 2.5e-47 192.6 160 56.9
BcaNung04881 Brassica carinata HOM05D005949 ORTHO05D006945 3.3e-47 192.2 159 59.1
Thhalv10025194m.g Eutrema salsugineum HOM05D005949 ORTHO05D006945 4.3e-47 191.8 159 59.7
BcaNung00787 Brassica carinata HOM05D005949 ORTHO05D006945 5.7e-47 191.4 159 59.1
C01p03190 Brassica napus HOM05D005949 ORTHO05D006945 5.7e-47 191.4 159 59.1
BraA01t00268Z Brassica rapa HOM05D005949 ORTHO05D006945 5.7e-47 191.4 159 59.1
BolC1t00304H Brassica oleracea HOM05D005949 ORTHO05D006945 9.7e-47 190.7 159 58.5
Carub.0007s0438 Capsella rubella HOM05D005949 ORTHO05D006945 9.7e-47 190.7 159 58.5
AL7G15220 Arabidopsis lyrata HOM05D005949 ORTHO05D006945 1.6e-46 189.9 159 57.2
A01p02870 Brassica napus HOM05D005949 ORTHO05D006945 1.6e-46 189.9 159 57.9
CARHR244220 Cardamine hirsuta HOM05D005949 ORTHO05D006945 2.2e-46 189.5 159 57.9
Aa31LG6G12800 Aethionema arabicum HOM05D005949 ORTHO05D006945 2.8e-46 189.1 160 57.5
AT4G35850 Arabidopsis thaliana HOM05D005949 ORTHO05D006945 3.7e-46 188.7 159 57.2
EL10Ac6g14123 Beta vulgaris HOM05D005949 ORTHO05D006945 6.9e-45 184.5 220 45.0
PSO063G1157 Papaver somniferum HOM05D005949 ORTHO05D006945 5.9e-44 181.4 161 56.5
SEGI_30195 Sequoiadendron giganteum HOM05D005949 ORTHO05D006945 5.9e-44 181.4 159 54.1
PSO754G0010 Papaver somniferum HOM05D005949 ORTHO05D006945 1.7e-43 179.9 161 57.1
Ah.02g128260 Amaranthus hybridus HOM05D005949 ORTHO05D006945 8.5e-43 177.6 189 48.1
CDE04G3569 Ceratophyllum demersum HOM05D005949 ORTHO05D006945 8.5e-43 177.6 153 54.2
Zm00001eb354320 Zea mays HOM05D005949 ORTHO05D006945 2.1e-41 172.9 155 56.1
Os05g0145600 Oryza sativa ssp. japonica HOM05D005949 ORTHO05D006945 5.1e-40 168.3 147 57.1
Peaxi162Scf00420g00016 Petunia axillaris HOM05D005949 ORTHO05D006945 6.7e-40 167.9 118 68.6
Sc07g0004380 Simmondsia chinensis HOM05D005949 ORTHO05D006945 2.2e-35 152.9 134 59.7
MBI10_g15883_MAGBIO Magnolia biondii HOM05D005949 ORTHO05D006945 4.2e-34 148.7 107 70.1
Cpa.g.sc130.71 Carica papaya HOM05D005949 ORTHO05D006945 7.9e-33 144.4 104 69.2
CAN.G370.99 Capsicum annuum HOM05D000140 ORTHO05D000087 1.8e-32 143.3 105 63.8
Thhalv10023015m.g Eutrema salsugineum HOM05D005949 ORTHO05D006945 1.8e-32 143.3 144 47.9
Zm00001eb120940 Zea mays HOM05D005949 ORTHO05D006945 9.7e-31 137.5 134 53.0
MBI10_g37260_MAGBIO Magnolia biondii HOM05D005949 ORTHO05D006945 5.3e-29 131.7 98 67.3
Duzib147G0933 Durio zibethinus HOM05D005949 ORTHO05D006945 4.5e-28 128.6 159 44.7
Sp7g33630 Schrenkiella parvula HOM05D005949 ORTHO05D006945 1.1e-23 114.0 106 57.5
Pp3c1_21850 Physcomitrium patens HOM05D005949 ORTHO05D006945 7.5e-23 111.3 153 37.9
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 7.7e-20 101.3 163 41.1
Mapoly0062s0069 Marchantia polymorpha HOM05D005949 ORTHO05D006945 1.5e-18 97.1 160 34.4
CBR_g20407 Chara braunii HOM05D005949 ORTHO05D006945 2.5e-18 96.3 154 29.9
Pp3c14_7210 Physcomitrium patens HOM05D005949 ORTHO05D006945 2.5e-18 96.3 144 34.7
SMO201G0168 Selaginella moellendorffii HOM05D005949 ORTHO05D006945 4.2e-18 95.5 155 35.5
CBR_g20410 Chara braunii HOM05D005949 ORTHO05D006945 7.2e-18 94.7 156 30.1
Psat1g081720 Pisum sativum HOM05D005949 ORTHO05D006945 3.4e-15 85.9 78 52.6
AagrBONN_evm.TU.Sc2ySwM_117.2156 Anthoceros agrestis HOM05D005949 ORTHO05D006945 1.4e-13 80.5 164 28.0
CAN.G15.16 Capsicum annuum HOM05D005949 ORTHO05D006945 7.0e-13 78.2 52 69.2
Cpa.g.sc130.69 Carica papaya HOM05D005949 ORTHO05D006945 2.7e-12 76.3 56 64.3
AL7G15200 Arabidopsis lyrata HOM05D005949 ORTHO05D006945 6.5e-11 71.6 126 34.1
MD09G1021100 Malus domestica HOM05D005949 ORTHO05D006945 1.9e-10 70.1 55 56.4
MBI07_g20478_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001968 9.4e-10 67.8 66 53.0
CAN.G479.6 Capsicum annuum HOM05D005949 ORTHO05D006945 5.2e-08 62.0 32 84.4
CAN.G898.5 Capsicum annuum HOM05D005949 ORTHO05D006945 2.0e-07 60.1 32 81.2
CAN.G2149.1 Capsicum annuum HOM05D001265 ORTHO05D006945 2.6e-07 59.7 32 81.2
CAN.G1258.4 Capsicum annuum HOM05D005949 ORTHO05D006945 1.3e-06 57.4 32 78.1


User provided reference genes

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