Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 0.0e+00 1569.3 944 100.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 7.6e-279 964.1 975 58.6
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.4e-248 862.8 861 71.4
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 6.7e-243 844.7 824 70.5
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 3.8e-238 828.9 821 58.8
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 4.0e-235 818.9 915 52.6
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.6e-231 807.0 831 69.1
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 2.5e-229 799.7 626 69.2
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.5e-229 798.5 599 73.3
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 3.6e-228 795.8 833 67.5
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 8.0e-228 794.7 826 67.1
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 7.5e-226 788.1 825 66.8
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 4.8e-225 785.4 796 68.5
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 8.3e-225 784.6 825 66.7
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.1e-224 784.3 825 66.5
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 3.1e-224 782.7 827 66.7
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 9.1e-224 781.2 825 66.5
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 5.9e-223 778.5 824 65.7
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.3e-222 777.3 801 66.7
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 2.2e-222 776.5 447 83.0
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 7.2e-221 771.5 826 65.3
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 9.4e-221 771.2 807 67.0
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.2e-220 770.8 832 65.3
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.2e-220 770.8 832 65.3
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 2.3e-219 766.5 791 68.1
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.0e-219 766.1 799 66.8
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 8.8e-219 764.6 784 68.2
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.5e-218 763.8 784 68.2
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 3.4e-218 762.7 824 64.7
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 5.7e-218 761.9 827 64.8
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 7.5e-218 761.5 832 64.9
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.3e-217 760.8 799 66.6
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 2.2e-217 760.0 827 65.5
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 2.8e-217 759.6 830 64.0
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.3e-217 758.4 824 65.0
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.8e-216 756.9 815 65.9
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 3.1e-216 756.1 830 63.4
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 9.2e-216 754.6 808 65.0
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.2e-215 754.2 824 64.7
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 3.5e-215 752.7 840 55.6
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 3.5e-215 752.7 825 65.9
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 4.5e-215 752.3 539 68.3
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 7.7e-215 751.5 828 64.6
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.3e-214 750.7 782 67.9
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.7e-214 750.4 537 68.9
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 3.8e-214 749.2 826 65.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 8.6e-214 748.0 833 64.6
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 1.1e-213 747.7 799 65.7
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 1.9e-213 746.9 791 64.1
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 3.3e-213 746.1 825 65.9
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.6e-213 745.3 543 68.3
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 7.3e-213 745.0 825 65.5
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 9.5e-213 744.6 815 65.5
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 9.5e-213 744.6 448 80.6
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.2e-212 744.2 826 65.1
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 6.1e-212 741.9 832 61.1
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 6.1e-212 741.9 794 65.1
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.0e-211 741.1 831 64.3
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 3.0e-211 739.6 829 63.1
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.9e-209 733.0 829 63.3
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.7e-209 732.6 789 66.9
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 8.3e-209 731.5 809 64.6
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.1e-208 731.1 824 62.4
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.4e-208 730.7 824 63.2
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.8e-208 730.3 447 77.2
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.4e-208 729.9 824 63.1
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 7.0e-208 728.4 824 62.5
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.1e-205 721.1 835 62.4
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 2.5e-205 719.9 819 61.7
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.3e-205 719.5 821 63.3
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 9.5e-205 718.0 771 68.5
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 3.6e-204 716.1 809 64.3
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 6.2e-204 715.3 823 63.2
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 8.0e-204 714.9 825 61.2
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 8.0e-204 714.9 815 64.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.4e-203 714.1 818 61.0
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 3.4e-202 709.5 826 60.5
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 4.4e-202 709.1 447 75.4
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.5e-202 708.4 811 62.8
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-201 707.6 825 60.0
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.2e-201 706.8 826 60.4
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 6.4e-201 705.3 449 75.5
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.0e-200 701.8 814 62.5
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 2.7e-199 699.9 787 64.0
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 4.6e-199 699.1 824 60.0
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 7.8e-199 698.4 827 61.4
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 6.6e-198 695.3 827 61.2
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 5.6e-197 692.2 791 63.3
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.6e-196 690.6 794 58.3
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.2e-195 685.6 796 62.3
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 9.8e-194 681.4 823 59.1
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.7e-193 679.5 442 72.9
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 4.9e-193 679.1 793 62.7
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 7.1e-192 675.2 793 62.4
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 6.0e-191 672.2 794 62.2
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 3.6e-188 662.9 823 60.5
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 4.4e-186 656.0 832 57.6
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 2.4e-184 650.2 790 59.6
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 7.9e-167 592.0 770 57.9
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.0e-166 591.7 448 64.7
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.9e-165 587.4 449 62.8
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 6.0e-151 539.3 393 65.9
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 8.5e-129 465.7 761 47.3
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.9e-128 464.5 556 46.2
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.5e-122 443.7 409 57.0
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 9.4e-120 435.6 664 56.8
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 3.6e-119 433.7 250 78.4
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.7e-108 397.1 811 38.8
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 6.1e-103 379.8 575 61.9
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.8e-102 378.3 205 84.4
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 1.8e-91 341.7 199 80.4
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 2.0e-90 338.2 814 35.4
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.5e-88 331.3 504 38.1
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.5e-72 278.9 568 57.6
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 9.9e-69 266.2 269 55.8
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 5.4e-67 260.4 421 37.3
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.9e-64 251.9 323 46.4
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 7.9e-50 203.4 443 57.3
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-44 185.7 133 60.9
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.3e-41 175.3 112 81.2
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 9.6e-40 169.9 126 65.9
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.6e-40 169.9 90 91.1
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.6e-39 169.1 126 65.9
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.6e-39 169.1 257 64.6
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 3.1e-38 164.9 181 48.1
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.3e-36 159.5 90 83.3
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.3e-32 144.8 74 83.8
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 7.4e-32 143.7 233 73.8
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 8.2e-31 140.2 114 65.8
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 2.4e-30 138.7 90 74.4
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 6.1e-26 124.0 73 80.8
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 5.1e-25 120.9 736 33.8
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 3.4e-21 108.2 129 46.5
CSS0002033 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 5.1e-17 94.4 45 100.0
CSS0044835 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D017532 4.4e-16 91.3 65 70.8
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.2e-15 87.0 82 56.1
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.2e-13 83.2 82 61.0
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 1.5e-13 82.8 93 43.0
CAN.G1823.3 Capsicum annuum HOM05D004966 ORTHO05D017532 1.0e-12 80.1 45 80.0
C01p10430 Brassica napus HOM05D003801 ORTHO05D017532 2.9e-12 78.6 92 43.5
BcaC09g50643 Brassica carinata HOM05D003801 ORTHO05D017532 2.5e-11 75.5 48 70.8
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.5e-11 75.5 41 85.4
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 1.0e-09 70.1 49 57.1
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 9.7e-08 63.5 44 75.0
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.7e-07 61.6 45 73.3


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