Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020540 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D008410 1.6e-67 259.2 127 100.0
CSS0033889 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D008410 1.2e-51 206.5 124 85.5
Dinv06600 Davidia involucrata HOM05D003039 ORTHO05D008410 2.4e-47 192.2 125 77.6
Hma1.2p1_0178F.1_g078560 Hydrangea macrophylla HOM05D003039 ORTHO05D008410 5.1e-45 184.5 127 73.2
Lj1P893G46 Lonicera japonica HOM05D003039 ORTHO05D008410 2.5e-44 182.2 123 72.4
GSVIVG01012782001 Vitis vinifera HOM05D003039 ORTHO05D008410 1.1e-42 176.8 124 69.4
vmacro21895 Vaccinium macrocarpon HOM05D003039 ORTHO05D008410 1.1e-39 166.8 106 73.6
Atru.chr4.952 Acer truncatum HOM05D003039 ORTHO05D008410 1.4e-39 166.4 123 65.9
CSS0042843 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D008410 7.1e-39 164.1 108 78.7
TAR633G1464 Trochodendron aralioides HOM05D003039 ORTHO05D008410 7.1e-39 164.1 126 67.5
QL07p027161 Quercus lobata HOM05D003039 ORTHO05D008410 9.3e-39 163.7 123 67.5
TWI09G0319 Tripterygium wilfordii HOM05D003039 ORTHO05D008410 2.1e-38 162.5 118 68.6
Rhsim02G0205300 Rhododendron simsii HOM05D003039 ORTHO05D008410 4.6e-38 161.4 99 75.8
Ciclev10019823m.g Citrus clementina HOM05D003039 ORTHO05D008410 6.0e-38 161.0 99 76.8
Prupe.2G028200 Prunus persica HOM05D003039 ORTHO05D008410 3.9e-37 158.3 98 76.5
CiPaw.16G103800 Carya illinoinensis HOM05D003039 ORTHO05D008410 8.7e-37 157.1 124 66.1
HanXRQChr03g0080361 Helianthus annuus HOM05D003039 ORTHO05D008410 8.7e-37 157.1 119 62.2
Potri.001G130400 Populus trichocarpa HOM05D003039 ORTHO05D008410 1.1e-36 156.8 119 65.5
RcHm_v2.0_Chr1g0329261 Rosa chinensis HOM05D003039 ORTHO05D008410 1.9e-36 156.0 99 72.7
Sabra01G0100800 Salix brachista HOM05D003039 ORTHO05D008410 1.9e-36 156.0 110 70.0
Haze_04486 Corylus avellana HOM05D003039 ORTHO05D008410 3.3e-36 155.2 97 78.4
Oeu046013.1 Olea europaea HOM05D003039 ORTHO05D008410 5.6e-36 154.5 100 74.0
Ah.11g043940 Amaranthus hybridus HOM05D003039 ORTHO05D008410 7.4e-36 154.1 115 67.8
MD03G1030500 Malus domestica HOM05D003039 ORTHO05D008410 7.4e-36 154.1 119 64.7
FvH4_7g04300 Fragaria vesca HOM05D003039 ORTHO05D008410 9.6e-36 153.7 99 72.7
FAN06G2480 Fragaria x ananassa HOM05D003039 ORTHO05D008410 9.6e-36 153.7 99 72.7
Cfa006303 Carpinus fangiana HOM05D003039 ORTHO05D008410 1.3e-35 153.3 98 78.6
Lsat_1_v5_gn_9_88941 Lactuca sativa HOM05D003039 ORTHO05D008410 2.1e-35 152.5 117 64.1
FAN10G1410 Fragaria x ananassa HOM05D003039 ORTHO05D008410 2.8e-35 152.1 99 71.7
Duzib235G1487 Durio zibethinus HOM05D003039 ORTHO05D008410 6.2e-35 151.0 127 59.1
EL10Ac5g11611 Beta vulgaris HOM05D003039 ORTHO05D008410 1.1e-34 150.2 120 63.3
CANSAT78G1923 Cannabis sativa HOM05D003039 ORTHO05D008410 1.1e-34 150.2 100 70.0
AUR62038751 Chenopodium quinoa HOM05D003039 ORTHO05D008410 1.1e-34 150.2 117 62.4
MD11G1035500 Malus domestica HOM05D003039 ORTHO05D008410 1.4e-34 149.8 98 73.5
Aqoxy7G02983 Aquilegia oxysepala HOM05D003039 ORTHO05D008410 2.4e-34 149.1 99 74.7
DCAR_013250 Daucus carota HOM05D003039 ORTHO05D008410 2.4e-34 149.1 119 61.3
Nitab4.5_0010112g0050 Nicotiana tabacum HOM05D003039 ORTHO05D008410 3.1e-34 148.7 98 71.4
Actinidia13220 Actinidia chinensis HOM05D003039 ORTHO05D008410 4.0e-34 148.3 100 74.0
CAN.G175.21 Capsicum annuum HOM05D003039 ORTHO05D008410 4.0e-34 148.3 97 71.1
Manes.03G196200 Manihot esculenta HOM05D003039 ORTHO05D008410 6.9e-34 147.5 97 70.1
Sc07g0006310 Simmondsia chinensis HOM05D003039 ORTHO05D008410 1.2e-33 146.7 113 59.3
Sopen04g027230 Solanum pennellii HOM05D003039 ORTHO05D008410 1.2e-33 146.7 98 66.3
PGSC0003DMG400008615 Solanum tuberosum HOM05D003039 ORTHO05D008410 1.2e-33 146.7 98 66.3
Gohir.A13G116700 Gossypium hirsutum HOM05D003039 ORTHO05D008410 2.6e-33 145.6 98 69.4
Gohir.D13G119800 Gossypium hirsutum HOM05D003039 ORTHO05D008410 3.4e-33 145.2 98 69.4
Nitab4.5_0000201g0210 Nicotiana tabacum HOM05D003039 ORTHO05D008410 4.5e-33 144.8 98 70.4
Thecc.06G053600 Theobroma cacao HOM05D003039 ORTHO05D008410 4.5e-33 144.8 120 62.5
Aa31LG9G15670 Aethionema arabicum HOM05D003039 ORTHO05D008410 5.8e-33 144.4 113 62.8
CsaV3_5G005760 Cucumis sativus L. HOM05D003039 ORTHO05D008410 5.8e-33 144.4 98 70.4
Solyc04g071280.3 Solanum lycopersicum HOM05D003039 ORTHO05D008410 5.8e-33 144.4 98 65.3
MELO3C005377.2 Cucumis melo HOM05D003039 ORTHO05D008410 9.9e-33 143.7 98 70.4
Gorai.013G134200 Gossypium raimondii HOM05D003039 ORTHO05D008410 2.2e-32 142.5 98 68.4
Cpa.g.sc33.110 Carica papaya HOM05D003039 ORTHO05D008410 2.9e-32 142.1 120 60.8
Cc10_g14690 Coffea canephora HOM05D003039 ORTHO05D008410 2.9e-32 142.1 100 67.0
Eucgr.D00236 Eucalyptus grandis HOM05D003039 ORTHO05D008410 2.9e-32 142.1 101 65.3
ECA240G2382 Erigeron canadensis HOM05D003039 ORTHO05D008410 3.8e-32 141.7 118 58.5
Carub.0005s2803 Capsella rubella HOM05D003039 ORTHO05D008410 6.4e-32 141.0 109 64.2
Nn2g12485 Nelumbo nucifera HOM05D003039 ORTHO05D008410 6.4e-32 141.0 99 70.7
Lj1g0018465 Lotus japonicus HOM05D003039 ORTHO05D008410 8.4e-32 140.6 96 66.7
CARHR171700 Cardamine hirsuta HOM05D003039 ORTHO05D008410 1.1e-31 140.2 98 68.4
PGR083G2073 Punica granatum HOM05D003039 ORTHO05D008410 1.1e-31 140.2 98 70.4
arahy.Tifrunner.gnm1.ann1.J1JT5X Arachis hypogaea HOM05D003039 ORTHO05D008410 1.4e-31 139.8 100 63.0
COL.COLO4_07473 Corchorus olitorius HOM05D003039 ORTHO05D008410 1.4e-31 139.8 98 69.4
Thhalv10006474m.g Eutrema salsugineum HOM05D003039 ORTHO05D008410 3.2e-31 138.7 98 66.3
AT3G61360 Arabidopsis thaliana HOM05D003039 ORTHO05D008410 4.2e-31 138.3 98 68.4
Migut.C01014 Erythranthe guttata HOM05D003039 ORTHO05D008410 5.5e-31 137.9 116 57.8
PSO170G3686 Papaver somniferum HOM05D003039 ORTHO05D008410 7.1e-31 137.5 99 66.7
Peaxi162Scf00765g00014 Petunia axillaris HOM05D003039 ORTHO05D008410 7.1e-31 137.5 98 67.3
A09p53410 Brassica napus HOM05D003039 ORTHO05D008410 1.2e-30 136.7 99 68.7
C08p36220 Brassica napus HOM05D003039 ORTHO05D008410 1.6e-30 136.3 99 67.7
BolC8t51204H Brassica oleracea HOM05D003039 ORTHO05D008410 1.6e-30 136.3 99 67.7
BraA09t40767Z Brassica rapa HOM05D003039 ORTHO05D008410 1.6e-30 136.3 99 67.7
SGA_v2.0_scaffold48G17965 Striga asiatica HOM05D003039 ORTHO05D008410 1.6e-30 136.3 113 58.4
AL5G43620 Arabidopsis lyrata HOM05D003039 ORTHO05D008410 2.1e-30 136.0 109 62.4
Sp5g02040 Schrenkiella parvula HOM05D003039 ORTHO05D008410 2.1e-30 136.0 98 65.3
THA.LOC104812722 Tarenaya hassleriana HOM05D003039 ORTHO05D008410 3.5e-30 135.2 98 66.3
CAN.G231.30 Capsicum annuum HOM05D003039 ORTHO05D008410 7.9e-30 134.0 88 68.2
VMungo0464G1133 Vigna mungo HOM05D003039 ORTHO05D008410 6.7e-29 131.0 104 57.7
Glyma.19G010600 Glycine max HOM05D003039 ORTHO05D008410 1.9e-28 129.4 104 56.7
SalBow7G2460 Salvia bowleyana HOM05D003039 ORTHO05D008410 1.9e-28 129.4 101 61.4
Phvul.004G017900 Phaseolus vulgaris HOM05D003039 ORTHO05D008410 2.5e-28 129.0 104 56.7
MBI14_g08138_MAGBIO Magnolia biondii HOM05D003039 ORTHO05D008410 1.6e-27 126.3 107 61.7
Lalb_Chr10g0093391 Lupinus albus HOM05D003039 ORTHO05D008410 4.8e-27 124.8 105 61.0
Sed0027709 Sechium edule HOM05D003039 ORTHO05D008410 1.4e-26 123.2 98 62.2
Ca_04108_v3 Cicer arietinum L. HOM05D003039 ORTHO05D008410 2.4e-26 122.5 117 52.1
Ca_04117_v3 Cicer arietinum L. HOM05D003039 ORTHO05D008410 2.4e-26 122.5 117 52.1
Ciclev10024535m.g Citrus clementina HOM05D003039 ORTHO05D008410 6.9e-26 120.9 99 61.6
TPR.G4337 Trifolium pratense HOM05D003039 ORTHO05D008410 6.9e-26 120.9 97 57.7
VMungo1383G1437 Vigna mungo HOM05D003039 ORTHO05D008410 1.5e-25 119.8 93 62.4
unitig_26.g10218 Utricularia gibba HOM05D003039 ORTHO05D008410 3.4e-25 118.6 102 57.8
ATR0580G194 Amborella trichopoda HOM05D003039 ORTHO05D008410 1.9e-23 112.8 109 52.3
CDE07G0739 Ceratophyllum demersum HOM05D003039 ORTHO05D008410 4.6e-22 108.2 97 53.6
Ciclev10027356m.g Citrus clementina HOM05D003039 ORTHO05D008410 4.8e-19 98.2 103 52.4
Dinv21315 Davidia involucrata HOM05D003039 ORTHO05D008410 6.3e-19 97.8 53 86.8
SEGI_15112 Sequoiadendron giganteum HOM05D003039 ORTHO05D008410 5.3e-18 94.7 124 43.5
Migut.D02462 Erythranthe guttata HOM05D003039 ORTHO05D009478 1.4e-07 60.1 96 35.4
SEGI_01398 Sequoiadendron giganteum HOM05D003039 ORTHO05D009478 1.2e-06 57.0 97 35.1
SEGI_39646 Sequoiadendron giganteum HOM05D003039 ORTHO05D009478 1.2e-06 57.0 97 35.1
Nn2g12694 Nelumbo nucifera HOM05D003039 ORTHO05D009478 2.7e-06 55.8 116 31.0


User provided reference genes

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