Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.7e-144 514.2 257 100.0
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.4e-142 508.8 257 98.8
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 5.5e-107 391.3 261 77.0
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 5.2e-105 384.8 261 76.2
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 3.6e-90 335.5 260 65.4
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 8.0e-90 334.3 265 65.7
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 2.3e-89 332.8 265 65.3
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 9.2e-86 320.9 260 63.8
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.2e-85 320.5 263 64.3
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.0e-85 319.7 256 62.5
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 2.7e-85 319.3 256 62.1
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 2.7e-85 319.3 254 63.8
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 2.7e-85 319.3 225 75.1
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 3.5e-85 318.9 256 63.3
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 4.6e-85 318.5 263 63.1
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 7.8e-85 317.8 256 63.3
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 1.3e-84 317.0 257 63.0
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 1.3e-84 317.0 263 60.1
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.7e-84 316.6 263 63.9
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 2.3e-84 316.2 258 63.2
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.9e-84 315.5 258 65.1
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 3.9e-84 315.5 260 62.3
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 5.0e-84 315.1 263 63.1
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 6.6e-84 314.7 258 64.7
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.6e-84 314.7 258 64.7
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-83 313.9 258 64.7
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 1.1e-83 313.9 263 62.4
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.5e-83 312.8 258 64.3
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 3.3e-83 312.4 263 62.4
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 7.3e-83 311.2 258 64.0
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 9.5e-83 310.8 262 62.2
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 2.1e-82 309.7 257 61.5
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 2.8e-82 309.3 263 61.6
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 4.7e-82 308.5 262 59.9
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.2e-82 308.1 258 64.3
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.2e-82 308.1 258 64.3
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 8.1e-82 307.8 261 64.4
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 8.1e-82 307.8 266 60.5
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 1.1e-81 307.4 258 61.6
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.8e-81 306.6 256 60.5
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 4.0e-81 305.4 261 62.8
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 8.9e-81 304.3 256 61.3
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 5.8e-80 301.6 262 60.7
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.5e-80 301.2 255 61.6
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 7.5e-80 301.2 255 61.6
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 1.3e-79 300.4 260 58.5
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 3.7e-79 298.9 262 59.9
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 8.3e-79 297.7 273 59.7
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 8.3e-79 297.7 260 61.2
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 8.3e-79 297.7 255 61.2
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.4e-78 297.0 256 58.2
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 1.4e-78 297.0 266 60.5
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 3.2e-78 295.8 264 58.0
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.1e-78 294.7 255 60.4
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 9.2e-78 294.3 227 69.2
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 6.0e-77 291.6 263 58.6
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 1.7e-76 290.0 257 58.8
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 1.7e-76 290.0 221 69.7
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 5.1e-76 288.5 266 57.1
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 5.1e-76 288.5 263 59.3
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 8.6e-76 287.7 259 58.3
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 8.6e-76 287.7 264 58.3
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 2.5e-75 286.2 262 56.9
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 5.6e-75 285.0 265 57.4
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 9.5e-75 284.3 317 49.8
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 4.7e-74 282.0 254 56.3
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.1e-73 280.8 265 58.1
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 1.8e-73 280.0 264 58.0
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 2.3e-73 279.6 259 58.3
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 3.1e-73 279.3 259 57.1
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 5.2e-73 278.5 255 56.9
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 1.2e-72 277.3 259 57.1
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 1.2e-72 277.3 259 57.1
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 1.2e-72 277.3 259 57.1
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.5e-72 276.9 265 56.2
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 2.6e-72 276.2 263 56.3
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 7.6e-72 274.6 267 54.7
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 7.6e-72 274.6 267 55.8
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 4.9e-71 271.9 264 54.9
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 2.7e-69 266.2 255 52.9
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.3e-68 263.8 261 53.3
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 3.0e-68 262.7 259 52.5
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 3.0e-68 262.7 263 55.1
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 1.5e-67 260.4 258 51.6
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 3.3e-67 259.2 260 53.1
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 5.6e-67 258.5 259 52.1
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 5.6e-67 258.5 223 61.9
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 2.8e-66 256.1 255 51.4
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 6.2e-66 255.0 214 65.0
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 8.1e-66 254.6 220 61.8
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 3.1e-65 252.7 230 59.1
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 6.9e-65 251.5 265 50.2
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 4.9e-63 245.4 229 59.4
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 5.4e-62 241.9 258 48.1
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 4.6e-61 238.8 156 79.5
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 6.6e-60 235.0 264 48.5
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.6e-58 230.3 253 53.0
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 4.8e-58 228.8 252 49.2
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 3.1e-57 226.1 231 50.6
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 5.1e-52 208.8 151 70.2
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.1e-49 201.1 149 66.4
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 2.7e-45 186.4 173 56.1
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 6.0e-45 185.3 146 58.9
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 2.2e-39 166.8 158 51.9
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 2.2e-39 166.8 158 51.9
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 2.2e-39 166.8 158 51.9
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 8.4e-39 164.9 248 40.3
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.4e-38 164.1 160 52.5
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 5.5e-38 162.2 148 52.7
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 1.5e-35 154.1 124 57.3
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 1.4e-33 147.5 226 38.5
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 4.5e-32 142.5 110 61.8
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 9.3e-30 134.8 115 54.8
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 9.3e-30 134.8 199 40.7
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 1.2e-29 134.4 166 48.8
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 1.6e-29 134.0 279 33.3
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.7e-23 114.0 162 49.4
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 2.5e-22 110.2 102 54.9
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.2e-22 109.8 81 72.8
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 2.3e-20 103.6 102 52.9
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 5.1e-20 102.4 95 52.6
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.1e-19 101.3 100 51.0
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 1.5e-16 90.9 192 34.9
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 2.2e-15 87.0 77 59.7
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 2.9e-15 86.7 171 33.3
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.1e-14 84.7 77 55.8
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 4.2e-14 82.8 48 79.2
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 2.3e-12 77.0 67 53.7
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 1.7e-10 70.9 104 42.3
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 1.1e-06 58.2 67 55.2
Oeu008279.1 Olea europaea HOM05D005673 ORTHO05D007081 7.2e-06 55.5 42 61.9


User provided reference genes

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