Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 1.1e-105 386.7 211 100.0
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 2.8e-48 196.1 221 60.2
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 7.1e-44 181.4 215 58.6
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 2.1e-43 179.9 166 70.5
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 1.4e-28 130.6 190 55.8
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 2.0e-25 120.2 215 47.0
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 8.2e-24 114.8 191 48.7
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 2.4e-23 113.2 189 51.9
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 3.1e-23 112.8 166 53.0
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 7.0e-23 111.7 191 48.2
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 2.0e-22 110.2 204 44.6
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 7.7e-22 108.2 213 41.8
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 7.7e-22 108.2 207 44.0
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 1.3e-21 107.5 230 43.9
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 1.3e-21 107.5 197 47.7
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 1.3e-21 107.5 194 45.9
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 2.9e-21 106.3 201 45.8
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 3.8e-21 105.9 234 43.6
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.8e-21 105.9 233 42.1
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 6.5e-21 105.1 190 45.3
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 8.5e-21 104.8 224 42.9
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.1e-20 104.4 206 43.2
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.5e-20 104.0 225 44.0
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.9e-20 103.6 183 44.3
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 5.5e-20 102.1 181 46.4
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 9.4e-20 101.3 209 44.5
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 6.1e-19 98.6 168 42.9
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 8.0e-19 98.2 215 42.3
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 8.0e-19 98.2 231 43.3
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 1.0e-18 97.8 210 45.2
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.4e-18 97.4 181 45.9
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 1.8e-18 97.1 196 45.4
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.3e-18 96.7 183 44.8
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 4.0e-18 95.9 221 39.8
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.0e-18 95.9 203 42.4
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 8.8e-18 94.7 198 47.5
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 3.7e-16 89.4 224 39.7
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 4.8e-16 89.0 169 41.4
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 4.8e-16 89.0 220 41.4
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 8.2e-16 88.2 158 48.7
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 8.2e-16 88.2 130 55.4
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.1e-15 87.8 237 40.5
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.1e-15 87.8 214 41.6
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 1.8e-15 87.0 177 46.3
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 5.3e-15 85.5 221 40.3
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 5.3e-15 85.5 213 41.8
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 7.0e-15 85.1 231 40.7
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.2e-14 84.3 215 40.0
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 2.0e-14 83.6 177 44.6
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 3.5e-14 82.8 194 41.8
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 4.5e-14 82.4 163 46.0
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 4.5e-14 82.4 125 49.6
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 1.3e-13 80.9 189 41.3
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 1.7e-13 80.5 212 39.6
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.7e-13 80.5 192 41.1
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 2.9e-13 79.7 191 44.5
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 3.8e-13 79.3 216 39.4
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 1.5e-12 77.4 182 39.0
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 1.9e-12 77.0 183 38.3
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 4.2e-12 75.9 204 35.3
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 4.2e-12 75.9 171 42.1
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 4.2e-12 75.9 209 36.4
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 5.5e-12 75.5 207 35.7
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 7.2e-12 75.1 192 40.1
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 1.2e-11 74.3 191 40.3
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 2.1e-11 73.6 227 35.2
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 6.1e-11 72.0 67 59.7
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 6.1e-11 72.0 171 36.3
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 8.0e-11 71.6 181 37.6
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 8.0e-11 71.6 54 70.4
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.0e-10 71.2 59 64.4
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.0e-10 71.2 59 64.4
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.0e-10 71.2 59 64.4
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 1.8e-10 70.5 57 66.7
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 4.0e-10 69.3 173 36.4
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 4.0e-10 69.3 231 33.3
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 5.2e-10 68.9 47 72.3
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 6.8e-10 68.6 157 36.9
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 8.8e-10 68.2 45 73.3
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 1.2e-09 67.8 106 50.0
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 1.5e-09 67.4 201 35.3
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.6e-09 66.6 105 42.9
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 3.4e-09 66.2 184 32.1
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 9.8e-09 64.7 45 80.0
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 2.2e-08 63.5 49 61.2
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.2e-08 63.5 49 61.2
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 2.8e-08 63.2 195 36.9
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 6.3e-08 62.0 126 46.8
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 8.3e-08 61.6 220 30.0
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.4e-07 60.8 112 44.6
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 2.4e-07 60.1 180 34.4
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 5.4e-07 58.9 57 59.6
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 1.2e-06 57.8 61 52.5
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 1.6e-06 57.4 215 30.2
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 2.7e-06 56.6 43 65.1
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 4.5e-06 55.8 40 67.5
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 5.9e-06 55.5 60 53.3
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 7.7e-06 55.1 40 67.5
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 7.7e-06 55.1 45 60.0
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 7.7e-06 55.1 45 60.0


User provided reference genes

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