Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.9e-139 498.4 235 100.0
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.6e-113 411.8 222 87.8
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 6.2e-113 411.0 222 87.8
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 1.1e-104 383.6 222 79.3
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 4.0e-104 381.7 222 78.8
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 6.8e-104 380.9 229 77.3
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 4.9e-102 374.8 229 74.2
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 5.4e-101 371.3 229 73.8
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 1.2e-100 370.2 229 73.4
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 3.5e-100 368.6 222 76.6
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 4.6e-100 368.2 222 76.6
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 7.8e-100 367.5 222 74.8
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 1.3e-99 366.7 222 74.8
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 1.3e-99 366.7 229 72.1
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 1.7e-99 366.3 227 72.2
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.0e-99 365.5 222 74.3
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 6.6e-99 364.4 239 73.2
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 8.7e-99 364.0 229 70.7
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 8.7e-99 364.0 229 72.1
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 1.1e-98 363.6 213 75.6
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 1.9e-98 362.8 222 74.3
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 1.9e-98 362.8 223 75.3
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 1.9e-98 362.8 229 72.1
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.9e-98 362.8 229 71.2
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 2.5e-98 362.5 222 73.4
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 3.3e-98 362.1 222 74.8
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 4.3e-98 361.7 229 72.5
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 4.3e-98 361.7 229 71.6
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 7.3e-98 360.9 226 73.5
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 1.6e-97 359.8 222 73.0
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 2.1e-97 359.4 222 73.9
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 2.1e-97 359.4 223 75.8
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 2.1e-97 359.4 223 75.3
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 3.6e-97 358.6 222 73.0
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 4.8e-97 358.2 222 74.3
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 8.1e-97 357.5 229 72.5
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 1.4e-96 356.7 229 72.1
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 1.4e-96 356.7 227 70.5
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 3.1e-96 355.5 222 71.6
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 4.0e-96 355.1 229 69.0
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 4.0e-96 355.1 229 70.7
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 5.3e-96 354.8 229 69.4
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 6.9e-96 354.4 222 71.6
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 6.9e-96 354.4 229 69.0
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 9.0e-96 354.0 222 73.9
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 9.0e-96 354.0 222 72.1
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 9.0e-96 354.0 206 78.2
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.2e-95 353.6 229 70.7
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.2e-95 353.6 229 72.1
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.0e-95 352.8 229 69.9
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.0e-95 352.8 247 66.4
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 3.4e-95 352.1 226 69.0
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 4.4e-95 351.7 229 68.6
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 4.4e-95 351.7 229 69.4
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 5.8e-95 351.3 229 69.0
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 5.8e-95 351.3 222 70.7
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 9.9e-95 350.5 222 71.2
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 2.2e-94 349.4 229 69.9
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 3.8e-94 348.6 229 68.1
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 4.9e-94 348.2 229 69.9
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 4.9e-94 348.2 229 69.9
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 4.9e-94 348.2 222 69.8
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 4.9e-94 348.2 222 70.7
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 6.4e-94 347.8 210 74.8
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 6.4e-94 347.8 229 67.2
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 1.4e-93 346.7 229 69.4
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.9e-93 346.3 203 82.8
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 5.4e-93 344.7 194 79.9
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 9.3e-93 344.0 222 68.9
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 1.2e-92 343.6 213 72.3
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 1.6e-92 343.2 222 69.8
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 1.6e-92 343.2 229 67.2
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 6.0e-92 341.3 229 67.7
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 6.0e-92 341.3 229 67.7
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 6.0e-92 341.3 222 70.3
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 6.0e-92 341.3 222 69.4
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 1.7e-91 339.7 229 69.0
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 3.9e-91 338.6 213 71.8
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 5.1e-91 338.2 229 68.1
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 2.5e-90 335.9 228 67.1
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 2.5e-90 335.9 228 65.4
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 3.3e-90 335.5 228 66.7
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 4.3e-90 335.1 228 67.1
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 9.6e-90 334.0 228 68.0
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 1.3e-89 333.6 232 69.0
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 2.1e-89 332.8 228 66.7
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 4.8e-89 331.6 227 67.0
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 8.1e-89 330.9 222 67.1
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 8.1e-89 330.9 228 66.7
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.8e-88 329.7 203 80.3
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 2.4e-88 329.3 229 65.1
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 3.1e-88 328.9 228 66.7
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 4.0e-88 328.6 229 65.5
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 5.3e-88 328.2 229 65.5
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 9.0e-88 327.4 208 70.2
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.2e-87 327.0 222 66.7
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 2.0e-87 326.2 230 63.0
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 3.4e-87 325.5 229 64.6
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 5.8e-87 324.7 222 67.1
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 9.9e-87 323.9 228 65.8
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 9.9e-87 323.9 228 65.4
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 2.2e-86 322.8 230 65.7
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 2.2e-86 322.8 229 64.2
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 3.8e-86 322.0 257 58.8
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 4.9e-86 321.6 222 63.1
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 6.4e-86 321.2 210 69.5
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 1.9e-85 319.7 211 65.9
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 7.1e-85 317.8 222 65.3
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 1.6e-84 316.6 229 62.9
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 4.6e-84 315.1 229 64.2
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 1.0e-83 313.9 194 72.2
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 4.3e-82 308.5 229 68.1
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 1.6e-81 306.6 245 60.0
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 2.4e-80 302.8 228 62.7
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 9.0e-80 300.8 202 66.8
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 7.6e-79 297.7 228 61.4
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.6e-76 290.0 226 58.0
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.1e-76 289.7 150 90.7
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 7.9e-76 287.7 224 56.2
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 1.0e-75 287.3 203 62.6
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 1.8e-75 286.6 222 60.4
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 7.4e-74 281.2 223 59.6
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.1e-73 279.6 148 86.5
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 4.8e-73 278.5 231 58.0
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 7.9e-68 261.2 150 76.7
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 9.7e-66 254.2 171 70.8
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 3.1e-64 249.2 233 53.6
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 4.5e-55 218.8 212 49.5
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 2.2e-49 199.9 229 46.3
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 4.8e-49 198.7 221 46.6
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 1.8e-48 196.8 218 46.8
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 2.9e-46 189.5 223 43.0
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 4.8e-41 172.2 94 76.6
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.9e-37 160.2 114 67.5
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 3.2e-37 159.5 222 41.9
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 1.6e-28 130.6 92 68.5
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 6.8e-27 125.2 108 60.2
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 1.4e-24 117.5 67 74.6
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 4.3e-21 105.9 235 28.9
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 4.9e-17 92.4 162 34.6
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 1.6e-15 87.4 64 60.9
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 4.6e-15 85.9 47 80.9
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 1.7e-14 84.0 156 34.0
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 1.4e-11 74.3 43 74.4
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 3.1e-11 73.2 40 77.5
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 6.4e-09 65.5 61 50.8


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