Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018226 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 1.0e-90 336.7 163 100.0
CSS0041800 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 5.3e-55 218.0 104 98.1
Dinv32028 Davidia involucrata HOM05D005112 ORTHO05D006681 8.5e-37 157.5 89 80.9
GSVIVG01013489001 Vitis vinifera HOM05D005112 ORTHO05D006681 7.2e-36 154.5 89 77.5
TAR636G0412 Trochodendron aralioides HOM05D005112 ORTHO05D006681 1.2e-35 153.7 84 79.8
Nn7g36668 Nelumbo nucifera HOM05D005112 ORTHO05D006681 2.7e-35 152.5 89 78.7
Cpa.g.sc540.4 Carica papaya HOM05D005112 ORTHO05D006681 8.0e-35 151.0 84 79.8
Actinidia02264 Actinidia chinensis HOM05D005112 ORTHO05D006681 1.8e-34 149.8 89 73.0
Prupe.2G035800 Prunus persica HOM05D005112 ORTHO05D006681 6.8e-34 147.9 89 74.2
vmacro12695 Vaccinium macrocarpon HOM05D005112 ORTHO05D006681 6.8e-34 147.9 84 77.4
Sabra03G0146500 Salix brachista HOM05D005112 ORTHO05D006681 1.2e-33 147.1 85 76.5
Gohir.D06G185100 Gossypium hirsutum HOM05D005112 ORTHO05D006681 1.5e-33 146.7 85 75.3
Gohir.A06G175300 Gossypium hirsutum HOM05D005112 ORTHO05D006681 2.0e-33 146.4 85 75.3
Cc02_g30230 Coffea canephora HOM05D005112 ORTHO05D006681 2.6e-33 146.0 85 75.3
Gorai.010G216500 Gossypium raimondii HOM05D005112 ORTHO05D006681 3.4e-33 145.6 85 74.1
Lj3g0016153 Lotus japonicus HOM05D005112 ORTHO05D006681 4.4e-33 145.2 85 72.9
Potri.003G196500 Populus trichocarpa HOM05D005112 ORTHO05D006681 4.4e-33 145.2 85 75.3
Manes.04G159700 Manihot esculenta HOM05D005112 ORTHO05D006681 5.7e-33 144.8 84 75.0
COL.COLO4_20752 Corchorus olitorius HOM05D005112 ORTHO05D006681 7.5e-33 144.4 85 74.1
Hma1.2p1_1202F.1_g266800 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 7.5e-33 144.4 91 72.5
Lsat_1_v5_gn_2_64381 Lactuca sativa HOM05D005112 ORTHO05D006681 7.5e-33 144.4 89 69.7
MD02G1287500 Malus domestica HOM05D005112 ORTHO05D006681 7.5e-33 144.4 85 74.1
CiPaw.13G013600 Carya illinoinensis HOM05D005112 ORTHO05D006681 9.8e-33 144.1 85 70.6
Thecc.10G157000 Theobroma cacao HOM05D005112 ORTHO05D006681 9.8e-33 144.1 85 74.1
Medtr8g039160 Medicago truncatula HOM05D005112 ORTHO05D006681 2.2e-32 142.9 85 71.8
Potri.001G027400 Populus trichocarpa HOM05D005112 ORTHO05D006681 2.2e-32 142.9 85 75.3
Prupe.2G035600 Prunus persica HOM05D005112 ORTHO05D006681 2.2e-32 142.9 89 73.0
ECA238G0687 Erigeron canadensis HOM05D005112 ORTHO05D006681 2.8e-32 142.5 89 69.7
Hma1.2p1_1202F.1_g266810 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 2.8e-32 142.5 84 73.8
Psat4g144800 Pisum sativum HOM05D005112 ORTHO05D006681 2.8e-32 142.5 85 70.6
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 2.8e-32 142.5 90 71.1
Sp5g07980 Schrenkiella parvula HOM05D005112 ORTHO05D006681 2.8e-32 142.5 85 74.1
Sopen08g005470 Solanum pennellii HOM05D005112 ORTHO05D006681 2.8e-32 142.5 85 74.1
BcaB02g08488 Brassica carinata HOM05D005112 ORTHO05D006681 3.7e-32 142.1 89 71.9
BcaC02g09069 Brassica carinata HOM05D005112 ORTHO05D006681 3.7e-32 142.1 89 71.9
C04p38070 Brassica napus HOM05D005112 ORTHO05D006681 3.7e-32 142.1 89 71.9
A04p05380 Brassica napus HOM05D005112 ORTHO05D006681 4.8e-32 141.7 85 72.9
BraA04t16238Z Brassica rapa HOM05D005112 ORTHO05D006681 4.8e-32 141.7 85 72.9
Thhalv10010080m.g Eutrema salsugineum HOM05D005112 ORTHO05D006681 4.8e-32 141.7 89 71.9
Peaxi162Scf00767g00521 Petunia axillaris HOM05D005112 ORTHO05D006681 4.8e-32 141.7 85 72.9
Aa31LG10G13430 Aethionema arabicum HOM05D005112 ORTHO05D006681 6.3e-32 141.4 89 71.9
Ca_23958_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 6.3e-32 141.4 85 70.6
HanXRQChr14g0446561 Helianthus annuus HOM05D005112 ORTHO05D006681 6.3e-32 141.4 89 68.5
MBI09_g12849_MAGBIO Magnolia biondii HOM05D005112 ORTHO05D006681 6.3e-32 141.4 89 71.9
Solyc08g014480.4 Solanum lycopersicum HOM05D005112 ORTHO05D006681 6.3e-32 141.4 85 72.9
VMungo1127G0803 Vigna mungo HOM05D005112 ORTHO05D006681 6.3e-32 141.4 89 69.7
CARHR164340 Cardamine hirsuta HOM05D005112 ORTHO05D006681 8.3e-32 141.0 85 72.9
THA.LOC104824194 Tarenaya hassleriana HOM05D005112 ORTHO05D006681 8.3e-32 141.0 89 71.9
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 1.1e-31 140.6 86 68.6
Sabra01G0019900 Salix brachista HOM05D005112 ORTHO05D006681 1.4e-31 140.2 84 75.0
arahy.Tifrunner.gnm1.ann1.2RH035 Arachis hypogaea HOM05D005112 ORTHO05D006681 1.8e-31 139.8 127 52.0
Carub.0005s2104 Capsella rubella HOM05D005112 ORTHO05D006681 1.8e-31 139.8 85 71.8
Duzib114G0621 Durio zibethinus HOM05D005112 ORTHO05D006681 1.8e-31 139.8 89 70.8
Phvul.011G206800 Phaseolus vulgaris HOM05D005112 ORTHO05D006681 3.1e-31 139.0 89 67.4
Sc14g0005780 Simmondsia chinensis HOM05D005112 ORTHO05D006681 3.1e-31 139.0 89 69.7
TPR.G27820 Trifolium pratense HOM05D005112 ORTHO05D006681 3.1e-31 139.0 85 69.4
BolC4t25382H Brassica oleracea HOM05D005112 ORTHO05D006681 4.1e-31 138.7 85 71.8
Glyma.13G197000 Glycine max HOM05D005112 ORTHO05D006681 4.1e-31 138.7 85 68.2
AL5G35490 Arabidopsis lyrata HOM05D005112 ORTHO05D006681 9.1e-31 137.5 85 70.6
Haze_03042 Corylus avellana HOM05D005112 ORTHO05D006681 9.1e-31 137.5 89 70.8
PSO339G5424 Papaver somniferum HOM05D005112 ORTHO05D006681 9.1e-31 137.5 85 70.6
CAN.G176.1 Capsicum annuum HOM05D005112 ORTHO05D006681 1.2e-30 137.1 85 70.6
QL04p017903 Quercus lobata HOM05D005112 ORTHO05D006681 1.2e-30 137.1 89 69.7
AT3G54440 Arabidopsis thaliana HOM05D005112 ORTHO05D006681 1.6e-30 136.7 85 70.6
arahy.Tifrunner.gnm1.ann1.LQLC9G Arachis hypogaea HOM05D005112 ORTHO05D006681 1.6e-30 136.7 127 51.2
MD07G1039900 Malus domestica HOM05D005112 ORTHO05D006681 2.0e-30 136.3 82 73.2
RcHm_v2.0_Chr1g0324261 Rosa chinensis HOM05D005112 ORTHO05D006681 2.7e-30 136.0 121 52.9
DCAR_006636 Daucus carota HOM05D005112 ORTHO05D006681 5.9e-30 134.8 85 68.2
MSTRG.20515 Avicennia marina HOM05D005112 ORTHO05D006681 7.7e-30 134.4 84 65.5
Ciclev10030068m.g Citrus clementina HOM05D005112 ORTHO05D006681 7.7e-30 134.4 89 67.4
Atru.chr12.1339 Acer truncatum HOM05D005112 ORTHO05D006681 1.0e-29 134.0 89 69.7
SGA_v2.0_scaffold124G33611 Striga asiatica HOM05D005112 ORTHO05D006681 1.0e-29 134.0 85 64.7
Lj9C664G6 Lonicera japonica HOM05D005112 ORTHO05D006681 1.3e-29 133.7 89 67.4
TWI38G0195 Tripterygium wilfordii HOM05D005112 ORTHO05D006681 1.3e-29 133.7 85 68.2
Aqoxy2G00366 Aquilegia oxysepala HOM05D005112 ORTHO05D006681 2.3e-29 132.9 89 66.3
CANSAT56G3144 Cannabis sativa HOM05D005112 ORTHO05D006681 6.6e-29 131.3 85 64.7
FvH4_7g03060 Fragaria vesca HOM05D005112 ORTHO05D006681 6.6e-29 131.3 85 65.9
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 6.6e-29 131.3 85 65.9
ATR0745G067 Amborella trichopoda HOM05D005112 ORTHO05D006681 8.6e-29 131.0 89 65.2
Lalb_Chr01g0007751 Lupinus albus HOM05D005112 ORTHO05D006681 8.6e-29 131.0 89 65.2
Nitab4.5_0002123g0050 Nicotiana tabacum HOM05D005112 ORTHO05D006681 8.6e-29 131.0 86 65.1
MELO3C012472.2 Cucumis melo HOM05D005112 ORTHO05D006681 2.5e-28 129.4 85 68.2
ClCG05G026800 Citrullus lanatus HOM05D005112 ORTHO05D006681 3.3e-28 129.0 85 68.2
CsaV3_5G036760 Cucumis sativus L. HOM05D005112 ORTHO05D006681 3.3e-28 129.0 85 68.2
FAN03G1408 Fragaria x ananassa HOM05D005112 ORTHO05D006681 3.3e-28 129.0 85 63.5
FAN10G2928 Fragaria x ananassa HOM05D005112 ORTHO05D006681 3.3e-28 129.0 85 63.5
RcHm_v2.0_Chr1g0324211 Rosa chinensis HOM05D005112 ORTHO05D006681 3.3e-28 129.0 81 66.7
Os01g0952600 Oryza sativa ssp. japonica HOM05D005112 ORTHO05D006681 4.2e-28 128.6 89 64.0
HPP92_012095 Vanilla planifolia HOM05D005112 ORTHO05D006681 2.1e-27 126.3 85 68.2
Sed0008595 Sechium edule HOM05D005112 ORTHO05D006681 8.0e-27 124.4 85 65.9
Eucgr.J01181 Eucalyptus grandis HOM05D005112 ORTHO05D006681 1.4e-26 123.6 89 61.8
PGR044G1764 Punica granatum HOM05D005112 ORTHO05D006681 3.0e-26 122.5 89 57.3
SEGI_07839 Sequoiadendron giganteum HOM05D005112 ORTHO05D006681 2.6e-25 119.4 82 61.0
unitig_22.g5425 Utricularia gibba HOM05D005112 ORTHO05D006681 5.7e-25 118.2 85 58.8
EL10Ac2g02802 Beta vulgaris HOM05D005112 ORTHO05D006681 9.2e-23 110.9 89 57.3
Zm00001eb140720 Zea mays HOM05D005112 ORTHO05D006681 9.2e-23 110.9 85 55.3
AUR62026862 Chenopodium quinoa HOM05D005112 ORTHO05D006681 2.0e-22 109.8 89 57.3
AUR62032651 Chenopodium quinoa HOM05D005112 ORTHO05D006681 4.5e-22 108.6 89 56.2
Hund27779 Selenicereus undatus HOM05D005112 ORTHO05D006681 7.8e-22 107.8 89 57.3
Hund27782 Selenicereus undatus HOM05D005112 ORTHO05D006681 1.0e-21 107.5 89 56.2
SMO266G0060 Selaginella moellendorffii HOM05D005112 ORTHO05D006681 9.5e-20 100.9 80 56.2
Pp3c7_1630 Physcomitrium patens HOM05D005112 ORTHO05D006681 5.8e-17 91.7 84 45.2
Mapoly0086s0033 Marchantia polymorpha HOM05D005112 ORTHO05D006681 1.1e-15 87.4 85 48.2
CBR_g32018 Chara braunii HOM05D005112 ORTHO05D006681 3.9e-13 79.0 86 44.2
Actinidia21519 Actinidia chinensis HOM05D000850 ORTHO05D000266 1.1e-12 77.4 49 65.3
AagrBONN_evm.TU.Sc2ySwM_368.212 Anthoceros agrestis HOM05D005112 ORTHO05D006681 1.9e-12 76.6 84 45.2


User provided reference genes

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