Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018156 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 2.0e-54 216.1 159 100.0
CSS0043064 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 4.4e-38 161.8 161 61.5
Rhsim04G0240200 Rhododendron simsii HOM05D006035 ORTHO05D007155 4.1e-28 128.6 160 48.1
vmacro08029 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 4.1e-28 128.6 159 47.8
Actinidia31554 Actinidia chinensis HOM05D006035 ORTHO05D007155 3.9e-26 122.1 161 53.4
QL06p012626 Quercus lobata HOM05D006035 ORTHO05D007155 9.6e-25 117.5 157 42.7
CSS0012943 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 2.8e-24 115.9 166 45.2
Duzib212G0974 Durio zibethinus HOM05D006035 ORTHO05D007155 2.8e-24 115.9 160 42.5
Thecc.04G302600 Theobroma cacao HOM05D006035 ORTHO05D007155 4.7e-24 115.2 164 43.3
COL.COLO4_34598 Corchorus olitorius HOM05D006035 ORTHO05D007155 6.2e-24 114.8 160 42.5
CANSAT78G2193 Cannabis sativa HOM05D006035 ORTHO05D007155 1.8e-23 113.2 162 41.4
CSS0047932 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 3.1e-23 112.5 166 44.6
Dinv44276 Davidia involucrata HOM05D006035 ORTHO05D007155 3.1e-23 112.5 159 42.8
Rhsim02G0003100 Rhododendron simsii HOM05D006035 ORTHO05D007155 3.1e-23 112.5 158 44.3
MD13G1151300 Malus domestica HOM05D006035 ORTHO05D007155 1.2e-22 110.5 159 44.7
SGA_v2.0_scaffold64G22102 Striga asiatica HOM05D006035 ORTHO05D007155 2.0e-22 109.8 161 40.4
TWI53G1140 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 2.6e-22 109.4 157 42.7
Oeu038775.1 Olea europaea HOM05D006035 ORTHO05D007155 4.4e-22 108.6 157 42.0
CSS0034436 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 5.8e-22 108.2 168 43.5
Oeu038777.1 Olea europaea HOM05D006035 ORTHO05D007155 5.8e-22 108.2 156 42.3
TWI09G1568 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 5.8e-22 108.2 159 43.4
Gohir.D09G234900 Gossypium hirsutum HOM05D006035 ORTHO05D007155 7.6e-22 107.8 161 42.2
Duzib151G0686 Durio zibethinus HOM05D006035 ORTHO05D007155 9.9e-22 107.5 158 41.8
Duzib052G0321 Durio zibethinus HOM05D006035 ORTHO05D007155 1.3e-21 107.1 160 49.4
Atru.chr4.3040 Acer truncatum HOM05D006035 ORTHO05D007155 1.7e-21 106.7 162 43.2
Gorai.006G257800 Gossypium raimondii HOM05D006035 ORTHO05D007155 2.9e-21 105.9 161 41.6
Oeu042670.1 Olea europaea HOM05D006035 ORTHO05D007155 2.9e-21 105.9 160 41.9
RcHm_v2.0_Chr4g0425671 Rosa chinensis HOM05D006035 ORTHO05D007155 4.9e-21 105.1 160 41.9
TPR.G25406 Trifolium pratense HOM05D006035 ORTHO05D007155 4.9e-21 105.1 157 39.5
MD16G1152300 Malus domestica HOM05D006035 ORTHO05D007155 6.4e-21 104.8 159 42.8
Manes.15G000900 Manihot esculenta HOM05D006035 ORTHO05D007155 6.4e-21 104.8 157 65.6
MELO3C006721.2 Cucumis melo HOM05D006035 ORTHO05D007155 1.1e-20 104.0 157 40.1
CsaV3_3G015240 Cucumis sativus L. HOM05D006035 ORTHO05D007155 1.1e-20 104.0 157 40.1
MSTRG.10157 Avicennia marina HOM05D006035 ORTHO05D007155 1.4e-20 103.6 157 54.8
Gohir.A09G234100 Gossypium hirsutum HOM05D006035 ORTHO05D007155 3.2e-20 102.4 142 43.0
Gohir.A10G173200 Gossypium hirsutum HOM05D006035 ORTHO05D007155 3.2e-20 102.4 161 40.4
PGR004G1138 Punica granatum HOM05D006035 ORTHO05D007155 3.2e-20 102.4 163 38.7
vmacro15178 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 3.2e-20 102.4 158 42.4
FvH4_4g19970 Fragaria vesca HOM05D006035 ORTHO05D007155 4.2e-20 102.1 157 41.4
Ca_21435_v3 Cicer arietinum L. HOM05D006035 ORTHO05D007155 5.4e-20 101.7 156 38.5
ClCG05G006630 Citrullus lanatus HOM05D006035 ORTHO05D007155 5.4e-20 101.7 157 40.8
Psat0s4013g0040 Pisum sativum HOM05D006035 ORTHO05D007155 5.4e-20 101.7 156 39.7
Cfa015301 Carpinus fangiana HOM05D006035 ORTHO05D007155 7.1e-20 101.3 161 41.0
Hma1.2p1_0013F.1_g008420 Hydrangea macrophylla HOM05D006035 ORTHO05D007155 7.1e-20 101.3 168 41.1
Sed0018605 Sechium edule HOM05D006035 ORTHO05D007155 7.1e-20 101.3 158 39.9
Gorai.011G201000 Gossypium raimondii HOM05D006035 ORTHO05D007155 1.2e-19 100.5 162 39.5
Aqoxy2G02699 Aquilegia oxysepala HOM05D006035 ORTHO05D007155 2.1e-19 99.8 158 39.2
Haze_01313 Corylus avellana HOM05D006035 ORTHO05D007155 2.7e-19 99.4 160 40.6
Migut.G00072 Erythranthe guttata HOM05D006035 ORTHO05D007155 3.5e-19 99.0 161 37.9
Glyma.17G034900 Glycine max HOM05D006035 ORTHO05D007155 4.6e-19 98.6 158 40.5
SalBow8G4845 Salvia bowleyana HOM05D006035 ORTHO05D007155 4.6e-19 98.6 162 40.1
Gohir.D10G179700 Gossypium hirsutum HOM05D006035 ORTHO05D007155 6.0e-19 98.2 162 39.5
VMungo1215G2980 Vigna mungo HOM05D006035 ORTHO05D007155 6.0e-19 98.2 157 36.9
FAN07G1803 Fragaria x ananassa HOM05D006035 ORTHO05D007155 7.8e-19 97.8 161 57.1
Phvul.005G129600 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 7.8e-19 97.8 157 36.3
ECA246G4755 Erigeron canadensis HOM05D006035 ORTHO05D007155 1.3e-18 97.1 157 41.4
Lalb_Chr07g0182041 Lupinus albus HOM05D006035 ORTHO05D007155 1.3e-18 97.1 158 38.0
Lalb_Chr13g0298531 Lupinus albus HOM05D006035 ORTHO05D007155 1.7e-18 96.7 159 37.1
PSO761G0247 Papaver somniferum HOM05D006035 ORTHO05D007155 1.7e-18 96.7 164 37.2
Phvul.003G115800 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 1.7e-18 96.7 159 37.1
Potri.008G103900 Populus trichocarpa HOM05D006035 ORTHO05D007155 1.7e-18 96.7 169 40.8
Medtr4g122260 Medicago truncatula HOM05D006035 ORTHO05D007155 2.3e-18 96.3 158 37.3
CiPaw.01G137000 Carya illinoinensis HOM05D006035 ORTHO05D007155 3.0e-18 95.9 162 40.7
Cc03_g00700 Coffea canephora HOM05D006035 ORTHO05D007155 3.0e-18 95.9 175 45.7
BcaC04g23738 Brassica carinata HOM05D006035 ORTHO05D007155 3.9e-18 95.5 158 37.3
C09p05220 Brassica napus HOM05D006035 ORTHO05D007155 3.9e-18 95.5 158 37.3
BolC9t53448H Brassica oleracea HOM05D006035 ORTHO05D007155 5.1e-18 95.1 158 37.3
DCAR_030462 Daucus carota HOM05D006035 ORTHO05D007155 5.1e-18 95.1 160 40.0
Nitab4.5_0000931g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 5.1e-18 95.1 166 38.0
PGSC0003DMG400001204 Solanum tuberosum HOM05D006035 ORTHO05D007155 8.7e-18 94.4 164 36.6
HanXRQChr05g0146001 Helianthus annuus HOM05D006035 ORTHO05D007155 1.1e-17 94.0 158 41.1
Cpa.g.sc9.45 Carica papaya HOM05D006035 ORTHO05D007155 1.5e-17 93.6 155 67.7
PGR031G3428 Punica granatum HOM05D006035 ORTHO05D007155 1.5e-17 93.6 162 42.6
Sopen01g024580 Solanum pennellii HOM05D006035 ORTHO05D007155 1.5e-17 93.6 164 36.6
BraA09t36121Z Brassica rapa HOM05D006035 ORTHO05D007155 2.5e-17 92.8 158 36.7
A09p04840 Brassica napus HOM05D006035 ORTHO05D007155 3.3e-17 92.4 158 36.1
Glyma.07G238700 Glycine max HOM05D006035 ORTHO05D007155 4.3e-17 92.0 144 38.9
Lj1g0017970 Lotus japonicus HOM05D006035 ORTHO05D007155 4.3e-17 92.0 162 36.4
Lsat_1_v5_gn_1_41620 Lactuca sativa HOM05D006035 ORTHO05D007155 5.6e-17 91.7 158 38.0
PSO210G7669 Papaver somniferum HOM05D006035 ORTHO05D007155 5.6e-17 91.7 162 35.2
Sc19g0003080 Simmondsia chinensis HOM05D006035 ORTHO05D007155 5.6e-17 91.7 159 37.1
HanXRQChr11g0353881 Helianthus annuus HOM05D006035 ORTHO05D007155 7.3e-17 91.3 161 38.5
HPP92_008930 Vanilla planifolia HOM05D006035 ORTHO05D007155 7.3e-17 91.3 157 37.6
CAN.G97.9 Capsicum annuum HOM05D006035 ORTHO05D007155 1.3e-16 90.5 166 35.5
Aa31LG11G8120 Aethionema arabicum HOM05D006035 ORTHO05D007155 1.6e-16 90.1 157 36.9
BcaB04g19614 Brassica carinata HOM05D006035 ORTHO05D007155 1.6e-16 90.1 158 36.7
Potri.010G146900 Populus trichocarpa HOM05D006035 ORTHO05D007155 1.6e-16 90.1 151 41.7
Sp2g19800 Schrenkiella parvula HOM05D006035 ORTHO05D007155 1.6e-16 90.1 162 36.4
SpUn0021_0050 Schrenkiella parvula HOM05D006035 ORTHO05D007155 1.6e-16 90.1 162 36.4
Sabra10G0113300 Salix brachista HOM05D006035 ORTHO05D007155 2.1e-16 89.7 168 38.1
AUR62039264 Chenopodium quinoa HOM05D006035 ORTHO05D007155 3.6e-16 89.0 165 37.0
Nn3g21749 Nelumbo nucifera HOM05D006035 ORTHO05D007155 3.6e-16 89.0 162 37.7
TAR633G1133 Trochodendron aralioides HOM05D006035 ORTHO05D007155 4.8e-16 88.6 159 40.3
AL8G23240 Arabidopsis lyrata HOM05D006035 ORTHO05D007155 8.1e-16 87.8 158 34.8
CARHR182020 Cardamine hirsuta HOM05D006035 ORTHO05D007155 1.8e-15 86.7 156 36.5
Manes.03G205900 Manihot esculenta HOM05D006035 ORTHO05D007155 1.8e-15 86.7 145 33.8
Ciclev10006076m.g Citrus clementina HOM05D006035 ORTHO05D007155 2.4e-15 86.3 163 35.6
Nitab4.5_0000655g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 2.4e-15 86.3 153 37.3
Eucgr.H04056 Eucalyptus grandis HOM05D006035 ORTHO05D007155 4.0e-15 85.5 192 40.1
EL10Ac3g05523 Beta vulgaris HOM05D006035 ORTHO05D007155 5.3e-15 85.1 165 35.8
Ah.13g071330 Amaranthus hybridus HOM05D006035 ORTHO05D007155 9.0e-15 84.3 178 32.0
Prupe.1G115600 Prunus persica HOM05D006035 ORTHO05D007155 1.5e-14 83.6 149 69.8
AT5G49480 Arabidopsis thaliana HOM05D006035 ORTHO05D007155 2.6e-14 82.8 157 33.1
Oeu038773.1 Olea europaea HOM05D006035 ORTHO05D007155 3.4e-14 82.4 190 31.1
Sabra08G0078500 Salix brachista HOM05D006035 ORTHO05D007155 3.4e-14 82.4 169 36.7
Lsat_1_v5_gn_6_116540 Lactuca sativa HOM05D006035 ORTHO05D007155 4.4e-14 82.0 158 37.3
THA.LOC104818878 Tarenaya hassleriana HOM05D006035 ORTHO05D007155 9.9e-14 80.9 161 35.4
ATR0693G356 Amborella trichopoda HOM05D006035 ORTHO05D007155 2.9e-13 79.3 157 33.8
AUR62016225 Chenopodium quinoa HOM05D006035 ORTHO05D007155 2.4e-12 76.3 150 36.0
unitig_32.g11850 Utricularia gibba HOM05D006035 ORTHO05D007155 4.2e-12 75.5 169 35.5
Lsat_1_v5_gn_6_116560 Lactuca sativa HOM05D006035 ORTHO05D007155 7.1e-12 74.7 158 35.4
Lj6P692T31 Lonicera japonica HOM05D006035 ORTHO05D007155 2.1e-11 73.2 48 68.8
Oeu038774.1 Olea europaea HOM05D006035 ORTHO05D007155 3.5e-11 72.4 156 39.7
GSVIVG01034916001 Vitis vinifera HOM05D006035 ORTHO05D007155 4.6e-11 72.0 48 68.8
Solyc01g058720.4 Solanum lycopersicum HOM05D006035 ORTHO05D007155 1.0e-10 70.9 148 33.8
TAR362G0119 Trochodendron aralioides HOM05D006035 ORTHO05D007155 1.3e-10 70.5 157 61.8
QL06p006093 Quercus lobata HOM05D001729 ORTHO05D001155 2.3e-10 69.7 53 62.3
Carub.0008s0934 Capsella rubella HOM05D006035 ORTHO05D007155 3.9e-10 68.9 163 59.5
Peaxi162Scf00228g00041 Petunia axillaris HOM05D006035 ORTHO05D007155 2.5e-09 66.2 135 34.8
MD04G1036600 Malus domestica HOM05D006035 ORTHO05D007155 7.3e-09 64.7 48 60.4
CDE08G1648 Ceratophyllum demersum HOM05D006035 ORTHO05D007155 3.4e-06 55.8 64 50.0
Ciclev10006337m.g Citrus clementina HOM05D006035 ORTHO05D007155 7.6e-06 54.7 44 56.8


User provided reference genes

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